SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601401 7ac5:B (2.26) BS01 GDP ? GO:0000226 ... Q6B856 34473086
    601402 7ac6:A (3.0) BS01 peptide ? GO:0005886 ... Q5M4H8 34473086
    601403 7ac6:A (3.0) BS02 78M ? GO:0005886 ... Q5M4H8 34473086
    601404 7ac6:A (3.0) BS03 78M ? GO:0005886 ... Q5M4H8 34473086
    601405 7ac6:A (3.0) BS04 78M ? GO:0005886 ... Q5M4H8 34473086
    601406 7ac6:A (3.0) BS05 78M ? GO:0005886 ... Q5M4H8 34473086
    601407 7ac6:A (3.0) BS06 78M ? GO:0005886 ... Q5M4H8 34473086
    601408 7ac6:A (3.0) BS07 78M ? GO:0005886 ... Q5M4H8 34473086
    601409 7ac6:A (3.0) BS08 78M ? GO:0005886 ... Q5M4H8 34473086
    601410 7ac6:A (3.0) BS09 78M ? GO:0005886 ... Q5M4H8 34473086
    601411 7ac6:A (3.0) BS10 78M ? GO:0005886 ... Q5M4H8 34473086
    601412 7ac6:A (3.0) BS11 78M ? GO:0005886 ... Q5M4H8 34473086
    601413 7ac6:A (3.0) BS12 78M ? GO:0005886 ... Q5M4H8 34473086
    601414 7ac6:A (3.0) BS13 78M ? GO:0005886 ... Q5M4H8 34473086
    601415 7ac6:A (3.0) BS14 78M ? GO:0005886 ... Q5M4H8 34473086
    601416 7ac7:5 (3.08) BS01 rna ? GO:0003723 ... P0A832 34389707
    601417 7ac7:5 (3.08) BS02 rna ? GO:0003723 ... P0A832 34389707
    601418 7ac7:A (3.08) BS01 rna ? GO:0000027 ... P0A7L8 34389707
    601419 7ac7:A (3.08) BS02 rna ? GO:0000027 ... P0A7L8 34389707
    601420 7ac7:B (3.08) BS01 rna ? GO:0000027 ... P60422 34389707
    601421 7ac7:B (3.08) BS02 rna ? GO:0000027 ... P60422 34389707
    601422 7ac7:C (3.08) BS01 rna ? GO:0000027 ... P60438 34389707
    601423 7ac7:D (3.08) BS01 rna ? GO:0001070 ... P60723 34389707
    601424 7ac7:E (3.08) BS01 rna ? GO:0000027 ... P62399 34389707
    601425 7ac7:E (3.08) BS02 rna ? GO:0000027 ... P62399 34389707
    601426 7ac7:E (3.08) BS03 rna ? GO:0000027 ... P62399 34389707
    601427 7ac7:F (3.08) BS01 rna ? GO:0000027 ... P0AG55 34389707
    601428 7ac7:G (3.08) BS01 rna ? GO:0002181 ... P0A7R1 34389707
    601429 7ac7:H (3.08) BS01 rna ? GO:0003735 ... P0A7J3 34389707
    601430 7ac7:J (3.08) BS01 rna ? GO:0002181 ... P0AA10 34389707
    601431 7ac7:K (3.08) BS01 rna ? GO:0002181 ... P0ADY3 34389707
    601432 7ac7:K (3.08) BS02 rna ? GO:0002181 ... P0ADY3 34389707
    601433 7ac7:L (3.08) BS01 rna ? GO:0002181 ... P02413 34389707
    601434 7ac7:M (3.08) BS01 rna ? GO:0000027 ... P0ADY7 34389707
    601435 7ac7:M (3.08) BS02 rna ? GO:0000027 ... P0ADY7 34389707
    601436 7ac7:M (3.08) BS03 rna ? GO:0000027 ... P0ADY7 34389707
    601437 7ac7:N (3.08) BS01 rna ? GO:0000027 ... P0AG44 34389707
    601438 7ac7:O (3.08) BS01 rna ? GO:0002181 ... P0C018 34389707
    601439 7ac7:O (3.08) BS02 rna ? GO:0002181 ... P0C018 34389707
    601440 7ac7:P (3.08) BS01 rna ? GO:0000027 ... P0A7K6 34389707
    601441 7ac7:P (3.08) BS02 rna ? GO:0000027 ... P0A7K6 34389707
    601442 7ac7:Q (3.08) BS01 rna ? GO:0000027 ... P0A7L3 34389707
    601443 7ac7:R (3.08) BS01 rna ? GO:0002181 ... P0AG48 34389707
    601444 7ac7:S (3.08) BS01 rna ? GO:0002181 ... P61175 34389707
    601445 7ac7:T (3.08) BS01 rna ? GO:0000027 ... P0ADZ0 34389707
    601446 7ac7:U (3.08) BS01 rna ? GO:0000027 ... P60624 34389707
    601447 7ac7:V (3.08) BS01 rna ? GO:0000027 ... P68919 34389707
    601448 7ac7:X (3.08) BS01 rna ? GO:0000027 ... P0A7M2 34389707
    601449 7ac7:Y (3.08) BS01 rna ? GO:0000027 ... P0A7M6 34389707
    601450 7ac7:Z (3.08) BS01 rna ? GO:0000027 ... P0AG51 34389707
    601451 7ac7:Z (3.08) BS02 rna ? GO:0000027 ... P0AG51 34389707
    601452 7ac7:a (3.08) BS01 rna ? GO:0002181 ... P0A7M9 34389707
    601453 7ac7:a (3.08) BS02 rna ? GO:0002181 ... P0A7M9 34389707
    601454 7ac7:a (3.08) BS03 ZN ? GO:0002181 ... P0A7M9 34389707
    601455 7ac7:b (3.08) BS01 rna ? GO:0000027 ... P0A7N4 34389707
    601456 7ac7:c (3.08) BS01 rna ? GO:0000027 ... P0A7N9 34389707
    601457 7ac7:d (3.08) BS01 rna ? GO:0002181 ... P0A7P5 34389707
    601458 7ac7:e (3.08) BS01 rna ? GO:0002181 ... P0A7Q1 34389707
    601459 7ac7:f (3.08) BS01 rna ? GO:0002181 ... P0A7Q6 34389707
    601460 7ac7:f (3.08) BS02 ZN ? GO:0002181 ... P0A7Q6 34389707
    601461 7ac7:g (3.08) BS01 rna ? GO:0000028 ... P0A7V0 34389707
    601462 7ac7:h (3.08) BS01 rna ? GO:0003676 ... P0A7V3 34389707
    601463 7ac7:h (3.08) BS02 rna ? GO:0003676 ... P0A7V3 34389707
    601464 7ac7:i (3.08) BS01 rna ? GO:0000028 ... P0A7V8 34389707
    601465 7ac7:j (3.08) BS01 rna ? GO:0000028 ... P0A7W1 34389707
    601466 7ac7:k (3.08) BS01 rna ? GO:0003735 ... P02358 34389707
    601467 7ac7:l (3.08) BS01 rna ? GO:0003723 ... P02359 34389707
    601468 7ac7:l (3.08) BS02 rna ? GO:0003723 ... P02359 34389707
    601469 7ac7:m (3.08) BS01 rna ? GO:0000028 ... P0A7W7 34389707
    601470 7ac7:n (3.08) BS01 rna ? GO:0000049 ... P0A7X3 34389707
    601471 7ac7:o (3.08) BS01 rna ? GO:0000049 ... P0A7R5 34389707
    601472 7ac7:p (3.08) BS01 rna ? GO:0002181 ... P0A7R9 34389707
    601473 7ac7:q (3.08) BS01 rna ? GO:0000049 ... P0A7S3 34389707
    601474 7ac7:r (3.08) BS01 rna ? GO:0000049 ... P0A7S9 34389707
    601475 7ac7:r (3.08) BS02 rna ? GO:0000049 ... P0A7S9 34389707
    601476 7ac7:s (3.08) BS01 rna ? GO:0000028 ... P0AG59 34389707
    601477 7ac7:t (3.08) BS01 rna ? GO:0000028 ... P0ADZ4 34389707
    601478 7ac7:t (3.08) BS02 rna ? GO:0000028 ... P0ADZ4 34389707
    601479 7ac7:u (3.08) BS01 rna ? GO:0000028 ... P0A7T3 34389707
    601480 7ac7:v (3.08) BS01 rna ? GO:0000028 ... P0AG63 34389707
    601481 7ac7:w (3.08) BS01 rna ? GO:0003735 ... P0A7T7 34389707
    601482 7ac7:x (3.08) BS01 rna ? GO:0003723 ... P0A7U3 34389707
    601483 7ac7:y (3.08) BS01 rna ? GO:0000028 ... P0A7U7 34389707
    601484 7ac7:z (3.08) BS01 rna ? GO:0000028 ... P68679 34389707
    601485 7ac7:z (3.08) BS02 rna ? GO:0000028 ... P68679 34389707
    601486 7ac8:A (2.06) BS01 GUO 4.3.2.10 GO:0000105 ... Q9X0C6 33980881
    601487 7ac8:B (2.06) BS01 GLN 3.5.1.2
    4.3.2.10
    GO:0000105 ... Q9X0C8 33980881
    601488 7ac8:C (2.06) BS01 PO4 4.3.2.10 GO:0000105 ... Q9X0C6 33980881
    601489 7ac8:D (2.06) BS01 GLN 3.5.1.2
    4.3.2.10
    GO:0000105 ... Q9X0C8 33980881
    601490 7ac8:E (2.06) BS01 GUO 4.3.2.10 GO:0000105 ... Q9X0C6 33980881
    601491 7ac8:F (2.06) BS01 GLN 3.5.1.2
    4.3.2.10
    GO:0000105 ... Q9X0C8 33980881
    601492 7ac9:H (1.393) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    601493 7ac9:H (1.393) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 N/A
    601494 7ac9:H (1.393) BS03 DAR 3.4.21.5 GO:0004252 ... P00734 N/A
    601495 7aca:A (1.57) BS01 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601496 7aca:A (1.57) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601497 7aca:B (1.57) BS01 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601498 7aca:B (1.57) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601499 7aca:C (1.57) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601500 7aca:C (1.57) BS02 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601501 7aca:D (1.57) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601502 7aca:D (1.57) BS02 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601503 7acd:A (2.5) BS01 R72 2.1.1.348 GO:0001510 ... Q86U44 34237194
    601504 7acd:B (2.5) BS01 MG ? N/A Q9HCE5 34237194
    601505 7acf:A (1.91) BS01 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601506 7acf:A (1.91) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601507 7acf:B (1.91) BS01 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601508 7acf:B (1.91) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601509 7acf:C (1.91) BS01 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601510 7acf:C (1.91) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601511 7acf:D (1.91) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601512 7acf:D (1.91) BS02 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601513 7acg:A (1.85) BS01 LH9 ? GO:0009279 ... P18895 N/A
    601514 7acg:A (1.85) BS02 LH9 ? GO:0009279 ... P18895 N/A
    601515 7acg:A (1.85) BS03 LH9 ? GO:0009279 ... P18895 N/A
    601516 7acg:A (1.85) BS04 LH9 ? GO:0009279 ... P18895 N/A
    601517 7acg:A (1.85) BS05 LH9 ? GO:0009279 ... P18895 N/A
    601518 7acg:A (1.85) BS06 LH9 ? GO:0009279 ... P18895 N/A
    601519 7acg:A (1.85) BS07 C8E ? GO:0009279 ... P18895 N/A
    601520 7acg:A (1.85) BS08 LH9 ? GO:0009279 ... P18895 N/A
    601521 7acg:A (1.85) BS09 LH9 ? GO:0009279 ... P18895 N/A
    601522 7acg:A (1.85) BS10 LH9 ? GO:0009279 ... P18895 N/A
    601523 7acg:A (1.85) BS11 LH9 ? GO:0009279 ... P18895 N/A
    601524 7ach:A (1.9) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601525 7ach:A (1.9) BS02 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601526 7ach:B (1.9) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601527 7ach:B (1.9) BS02 MG 3.6.5.2 GO:0003924 ... P01116 N/A
    601528 7aci:A (2.3) BS01 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601529 7aci:A (2.3) BS02 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601530 7aci:A (2.3) BS03 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601531 7aci:A (2.3) BS04 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601532 7aci:A (2.3) BS05 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601533 7aci:A (2.3) BS06 LH9 2.3.1.269 GO:0005515 ... P23930 N/A
    601534 7acj:5 (3.2) BS01 rna ? GO:0003723 ... P0A832 34389707
    601535 7acj:5 (3.2) BS02 rna ? GO:0003723 ... P0A832 34389707
    601536 7acj:5 (3.2) BS03 rna ? GO:0003723 ... P0A832 34389707
    601537 7acj:5 (3.2) BS04 MG ? GO:0003723 ... P0A832 34389707
    601538 7acj:A (3.2) BS01 rna ? GO:0000027 ... P0A7L8 34389707
    601539 7acj:A (3.2) BS02 rna ? GO:0000027 ... P0A7L8 34389707
    601540 7acj:B (3.2) BS01 rna ? GO:0000027 ... P60422 34389707
    601541 7acj:B (3.2) BS02 MG ? GO:0000027 ... P60422 34389707
    601542 7acj:B (3.2) BS03 MG ? GO:0000027 ... P60422 34389707
    601543 7acj:C (3.2) BS01 rna ? GO:0000027 ... P60438 34389707
    601544 7acj:D (3.2) BS01 rna ? GO:0001070 ... P60723 34389707
    601545 7acj:E (3.2) BS01 rna ? GO:0000027 ... P62399 34389707
    601546 7acj:E (3.2) BS02 rna ? GO:0000027 ... P62399 34389707
    601547 7acj:E (3.2) BS03 rna ? GO:0000027 ... P62399 34389707
    601548 7acj:F (3.2) BS01 rna ? GO:0000027 ... P0AG55 34389707
    601549 7acj:G (3.2) BS01 rna ? GO:0002181 ... P0A7R1 34389707
    601550 7acj:J (3.2) BS01 rna ? GO:0002181 ... P0AA10 34389707
    601551 7acj:K (3.2) BS01 rna ? GO:0002181 ... P0ADY3 34389707
    601552 7acj:K (3.2) BS02 rna ? GO:0002181 ... P0ADY3 34389707
    601553 7acj:L (3.2) BS01 rna ? GO:0002181 ... P02413 34389707
    601554 7acj:M (3.2) BS01 rna ? GO:0000027 ... P0ADY7 34389707
    601555 7acj:N (3.2) BS01 rna ? GO:0000027 ... P0AG44 34389707
    601556 7acj:O (3.2) BS01 rna ? GO:0002181 ... P0C018 34389707
    601557 7acj:O (3.2) BS02 rna ? GO:0002181 ... P0C018 34389707
    601558 7acj:P (3.2) BS01 rna ? GO:0000027 ... P0A7K6 34389707
    601559 7acj:P (3.2) BS02 rna ? GO:0000027 ... P0A7K6 34389707
    601560 7acj:Q (3.2) BS01 rna ? GO:0000027 ... P0A7L3 34389707
    601561 7acj:R (3.2) BS01 rna ? GO:0002181 ... P0AG48 34389707
    601562 7acj:S (3.2) BS01 rna ? GO:0002181 ... P61175 34389707
    601563 7acj:T (3.2) BS01 rna ? GO:0000027 ... P0ADZ0 34389707
    601564 7acj:U (3.2) BS01 rna ? GO:0000027 ... P60624 34389707
    601565 7acj:V (3.2) BS01 rna ? GO:0000027 ... P68919 34389707
    601566 7acj:X (3.2) BS01 rna ? GO:0000027 ... P0A7M2 34389707
    601567 7acj:Y (3.2) BS01 rna ? GO:0000027 ... P0A7M6 34389707
    601568 7acj:Z (3.2) BS01 rna ? GO:0000027 ... P0AG51 34389707
    601569 7acj:a (3.2) BS01 rna ? GO:0002181 ... P0A7M9 34389707
    601570 7acj:a (3.2) BS02 rna ? GO:0002181 ... P0A7M9 34389707
    601571 7acj:a (3.2) BS03 rna ? GO:0002181 ... P0A7M9 34389707
    601572 7acj:a (3.2) BS04 ZN ? GO:0002181 ... P0A7M9 34389707
    601573 7acj:b (3.2) BS01 rna ? GO:0000027 ... P0A7N4 34389707
    601574 7acj:c (3.2) BS01 rna ? GO:0000027 ... P0A7N9 34389707
    601575 7acj:d (3.2) BS01 rna ? GO:0002181 ... P0A7P5 34389707
    601576 7acj:e (3.2) BS01 rna ? GO:0002181 ... P0A7Q1 34389707
    601577 7acj:f (3.2) BS01 rna ? GO:0002181 ... P0A7Q6 34389707
    601578 7acj:f (3.2) BS02 ZN ? GO:0002181 ... P0A7Q6 34389707
    601579 7acj:g (3.2) BS01 rna ? GO:0000028 ... P0A7V0 34389707
    601580 7acj:g (3.2) BS02 rna ? GO:0000028 ... P0A7V0 34389707
    601581 7acj:h (3.2) BS01 rna ? GO:0000028 ... P0A7V3 34389707
    601582 7acj:h (3.2) BS02 rna ? GO:0000028 ... P0A7V3 34389707
    601583 7acj:i (3.2) BS01 rna ? GO:0000028 ... P0A7V8 34389707
    601584 7acj:i (3.2) BS02 rna ? GO:0000028 ... P0A7V8 34389707
    601585 7acj:j (3.2) BS01 rna ? GO:0000028 ... P0A7W1 34389707
    601586 7acj:j (3.2) BS02 rna ? GO:0000028 ... P0A7W1 34389707
    601587 7acj:k (3.2) BS01 rna ? GO:0003735 ... P02358 34389707
    601588 7acj:l (3.2) BS01 rna ? GO:0003723 ... P02359 34389707
    601589 7acj:m (3.2) BS01 rna ? GO:0000028 ... P0A7W7 34389707
    601590 7acj:n (3.2) BS01 rna ? GO:0000049 ... P0A7X3 34389707
    601591 7acj:o (3.2) BS01 rna ? GO:0000049 ... P0A7R5 34389707
    601592 7acj:p (3.2) BS01 rna ? GO:0002181 ... P0A7R9 34389707
    601593 7acj:q (3.2) BS01 rna ? GO:0000049 ... P0A7S3 34389707
    601594 7acj:r (3.2) BS01 rna ? GO:0000049 ... P0A7S9 34389707
    601595 7acj:r (3.2) BS02 rna ? GO:0000049 ... P0A7S9 34389707
    601596 7acj:s (3.2) BS01 rna ? GO:0000028 ... P0AG59 34389707
    601597 7acj:t (3.2) BS01 rna ? GO:0000028 ... P0ADZ4 34389707
    601598 7acj:t (3.2) BS02 rna ? GO:0000028 ... P0ADZ4 34389707
    601599 7acj:u (3.2) BS01 rna ? GO:0000028 ... P0A7T3 34389707
    601600 7acj:v (3.2) BS01 rna ? GO:0000028 ... P0AG63 34389707

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).