SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601601 7acj:w (3.2) BS01 rna ? GO:0003735 ... P0A7T7 34389707
    601602 7acj:x (3.2) BS01 rna ? GO:0000028 ... P0A7U3 34389707
    601603 7acj:x (3.2) BS02 rna ? GO:0000028 ... P0A7U3 34389707
    601604 7acj:y (3.2) BS01 rna ? GO:0000028 ... P0A7U7 34389707
    601605 7acj:z (3.2) BS01 rna ? GO:0000028 ... P68679 34389707
    601606 7ack:A (1.8) BS01 R7B 2.7.11.22 GO:0000082 ... P24941 33711765
    601607 7ack:C (1.8) BS01 R7B 2.7.11.22 GO:0000082 ... P24941 33711765
    601608 7acm:A (1.763) BS01 TMO ? GO:0003677 ... P75811 34288132
    601609 7acm:B (1.763) BS01 TMO ? GO:0003677 ... P75811 34288132
    601610 7acn:A (2.0) BS01 SF4 4.2.1.3 GO:0003994 ... P16276 1547214
    601611 7acp:A (1.45) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    601612 7acp:B (1.45) BS01 HEM ? GO:0004601 ... Q9NAV7 N/A
    601613 7acq:A (1.86) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 N/A
    601614 7acq:A (1.86) BS02 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601615 7acq:B (1.86) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601616 7acq:B (1.86) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 N/A
    601617 7acq:C (1.86) BS01 R6W 3.6.5.2 GO:0003924 ... P01116 N/A
    601618 7acq:C (1.86) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 N/A
    601619 7acr:5 (3.44) BS01 rna ? GO:0003723 ... A0A330BLJ1 34389707
    601620 7acr:5 (3.44) BS02 rna ? GO:0003723 ... A0A330BLJ1 34389707
    601621 7acr:5 (3.44) BS03 rna ? GO:0003723 ... A0A330BLJ1 34389707
    601622 7acr:A (3.44) BS01 rna ? GO:0003735 ... P0A7L8 34389707
    601623 7acr:A (3.44) BS02 rna ? GO:0003735 ... P0A7L8 34389707
    601624 7acr:B (3.44) BS01 rna ? GO:0000027 ... P60422 34389707
    601625 7acr:B (3.44) BS02 rna ? GO:0000027 ... P60422 34389707
    601626 7acr:C (3.44) BS01 rna ? GO:0000027 ... P60438 34389707
    601627 7acr:D (3.44) BS01 rna ? GO:0001070 ... P60723 34389707
    601628 7acr:E (3.44) BS01 rna ? GO:0000027 ... P62399 34389707
    601629 7acr:E (3.44) BS02 rna ? GO:0000027 ... P62399 34389707
    601630 7acr:E (3.44) BS03 rna ? GO:0000027 ... P62399 34389707
    601631 7acr:F (3.44) BS01 rna ? GO:0000027 ... P0AG55 34389707
    601632 7acr:G (3.44) BS01 rna ? GO:0002181 ... P0A7R1 34389707
    601633 7acr:J (3.44) BS01 rna ? GO:0002181 ... P0AA10 34389707
    601634 7acr:K (3.44) BS01 rna ? GO:0002181 ... P0ADY3 34389707
    601635 7acr:K (3.44) BS02 rna ? GO:0002181 ... P0ADY3 34389707
    601636 7acr:L (3.44) BS01 rna ? GO:0002181 ... P02413 34389707
    601637 7acr:M (3.44) BS01 rna ? GO:0000027 ... P0ADY7 34389707
    601638 7acr:M (3.44) BS02 rna ? GO:0000027 ... P0ADY7 34389707
    601639 7acr:N (3.44) BS01 rna ? GO:0000027 ... P0AG44 34389707
    601640 7acr:O (3.44) BS01 rna ? GO:0002181 ... P0C018 34389707
    601641 7acr:O (3.44) BS02 rna ? GO:0002181 ... P0C018 34389707
    601642 7acr:O (3.44) BS03 MG ? GO:0002181 ... P0C018 34389707
    601643 7acr:P (3.44) BS01 rna ? GO:0000027 ... P0A7K6 34389707
    601644 7acr:P (3.44) BS02 rna ? GO:0000027 ... P0A7K6 34389707
    601645 7acr:Q (3.44) BS01 rna ? GO:0000027 ... P0A7L3 34389707
    601646 7acr:R (3.44) BS01 rna ? GO:0002181 ... P0AG48 34389707
    601647 7acr:S (3.44) BS01 rna ? GO:0002181 ... P61175 34389707
    601648 7acr:T (3.44) BS01 rna ? GO:0000027 ... P0ADZ0 34389707
    601649 7acr:U (3.44) BS01 rna ? GO:0000027 ... P60624 34389707
    601650 7acr:V (3.44) BS01 rna ? GO:0000027 ... P68919 34389707
    601651 7acr:X (3.44) BS01 rna ? GO:0000027 ... P0A7M2 34389707
    601652 7acr:Y (3.44) BS01 rna ? GO:0000027 ... P0A7M6 34389707
    601653 7acr:Z (3.44) BS01 rna ? GO:0000027 ... P0AG51 34389707
    601654 7acr:a (3.44) BS01 rna ? GO:0002181 ... P0A7M9 34389707
    601655 7acr:a (3.44) BS02 ZN ? GO:0002181 ... P0A7M9 34389707
    601656 7acr:b (3.44) BS01 rna ? GO:0000027 ... P0A7N4 34389707
    601657 7acr:c (3.44) BS01 rna ? GO:0000027 ... P0A7N9 34389707
    601658 7acr:d (3.44) BS01 rna ? GO:0002181 ... P0A7P5 34389707
    601659 7acr:e (3.44) BS01 rna ? GO:0002181 ... P0A7Q1 34389707
    601660 7acr:f (3.44) BS01 rna ? GO:0002181 ... P0A7Q6 34389707
    601661 7acr:f (3.44) BS02 ZN ? GO:0002181 ... P0A7Q6 34389707
    601662 7acr:g (3.44) BS01 rna ? GO:0000028 ... P0A7V0 34389707
    601663 7acr:g (3.44) BS02 rna ? GO:0000028 ... P0A7V0 34389707
    601664 7acr:h (3.44) BS01 rna ? GO:0000028 ... P0A7V3 34389707
    601665 7acr:h (3.44) BS02 rna ? GO:0000028 ... P0A7V3 34389707
    601666 7acr:h (3.44) BS03 MG ? GO:0000028 ... P0A7V3 34389707
    601667 7acr:i (3.44) BS01 rna ? GO:0000028 ... P0A7V8 34389707
    601668 7acr:i (3.44) BS02 rna ? GO:0000028 ... P0A7V8 34389707
    601669 7acr:j (3.44) BS01 rna ? GO:0000028 ... P0A7W1 34389707
    601670 7acr:j (3.44) BS02 rna ? GO:0000028 ... P0A7W1 34389707
    601671 7acr:k (3.44) BS01 rna ? GO:0003735 ... P02358 34389707
    601672 7acr:l (3.44) BS01 rna ? GO:0003723 ... P02359 34389707
    601673 7acr:m (3.44) BS01 rna ? GO:0000028 ... P0A7W7 34389707
    601674 7acr:n (3.44) BS01 rna ? GO:0000049 ... P0A7X3 34389707
    601675 7acr:o (3.44) BS01 rna ? GO:0000049 ... P0A7R5 34389707
    601676 7acr:p (3.44) BS01 rna ? GO:0002181 ... P0A7R9 34389707
    601677 7acr:q (3.44) BS01 rna ? GO:0000049 ... P0A7S3 34389707
    601678 7acr:r (3.44) BS01 rna ? GO:0000049 ... P0A7S9 34389707
    601679 7acr:s (3.44) BS01 rna ? GO:0000028 ... P0AG59 34389707
    601680 7acr:t (3.44) BS01 rna ? GO:0000028 ... P0ADZ4 34389707
    601681 7acr:t (3.44) BS02 rna ? GO:0000028 ... P0ADZ4 34389707
    601682 7acr:u (3.44) BS01 rna ? GO:0000028 ... P0A7T3 34389707
    601683 7acr:v (3.44) BS01 rna ? GO:0000028 ... P0AG63 34389707
    601684 7acr:w (3.44) BS01 rna ? GO:0003735 ... P0A7T7 34389707
    601685 7acr:x (3.44) BS01 rna ? GO:0000028 ... P0A7U3 34389707
    601686 7acr:x (3.44) BS02 rna ? GO:0000028 ... P0A7U3 34389707
    601687 7acr:y (3.44) BS01 rna ? GO:0000028 ... P0A7U7 34389707
    601688 7acr:z (3.44) BS01 rna ? GO:0000028 ... P68679 34389707
    601689 7acs:A (-1.00) BS01 rna ? GO:0003723 ... P0DTC9 33264373
    601690 7acs:A (-1.00) BS02 rna ? GO:0003723 ... P0DTC9 33264373
    601691 7act:A (-1.00) BS01 rna ? GO:0003723 ... P0DTC9 33264373
    601692 7acu:A (1.541) BS01 R75 ? GO:0001523 ... P02766 32998442 MOAD: ic50=4.3uM
    601693 7acu:B (1.541) BS01 R75 ? GO:0001523 ... P02766 32998442 MOAD: ic50=4.3uM
    601694 7acv:A (2.4) BS01 peptide 3.5.1.28 N/A Q9AEM2 35217634
    601695 7ad0:A (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601696 7ad0:A (2.07) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601697 7ad0:B (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601698 7ad0:C (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601699 7ad0:D (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601700 7ad0:E (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601701 7ad0:F (2.07) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601702 7ad0:F (2.07) BS02 peptide 2.3.2.27 GO:0005634 ... Q00987 N/A
    601703 7ad3:A (3.3) BS01 peptide ? GO:0000750 ... D6VTK4 33268889
    601704 7ad3:A (3.3) BS02 Y01 ? GO:0000750 ... D6VTK4 33268889
    601705 7ad3:B (3.3) BS01 peptide ? GO:0000750 ... D6VTK4 33268889
    601706 7ad3:B (3.3) BS02 peptide ? GO:0000750 ... D6VTK4 33268889
    601707 7ad3:B (3.3) BS03 Y01 ? GO:0000750 ... D6VTK4 33268889
    601708 7ad3:B (3.3) BS04 Y01 ? GO:0000750 ... D6VTK4 33268889
    601709 7ad3:F (3.3) BS01 peptide ? GO:0000749 ... P18851 33268889
    601710 7ad6:A (2.75) BS01 CYS ? GO:0004866 ... P01031 33570492
    601711 7ad7:B (2.3) BS01 MHA ? GO:0004866 ... P01031 33570492
    601712 7ad8:A (3.5) BS01 dna 5.6.2.4 GO:0000112 ... P19447 33166411
    601713 7ad8:A (3.5) BS02 dna 5.6.2.4 GO:0000112 ... P19447 33166411
    601714 7ad8:B (3.5) BS01 dna 3.6.4.12 GO:0000439 ... P18074 33166411
    601715 7ad8:B (3.5) BS02 SF4 3.6.4.12 GO:0000439 ... P18074 33166411
    601716 7ad8:D (3.5) BS01 ZN ? GO:0000438 ... Q13888 33166411
    601717 7ad8:D (3.5) BS02 ZN ? GO:0000438 ... Q13888 33166411
    601718 7ad8:E (3.5) BS01 ZN ? GO:0000438 ... Q13889 33166411
    601719 7ad8:G (3.5) BS01 dna ? GO:0000110 ... P23025 33166411
    601720 7ad8:G (3.5) BS02 dna ? GO:0000110 ... P23025 33166411
    601721 7ad8:G (3.5) BS03 ZN ? GO:0000110 ... P23025 33166411
    601722 7ad9:B (3.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601723 7ad9:B (3.5) BS02 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601724 7ad9:B (3.5) BS03 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601725 7ad9:B (3.5) BS04 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601726 7ad9:B (3.5) BS05 ADP 3.6.4.- GO:0000287 ... P68135 33216759
    601727 7ad9:D (3.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601728 7ad9:D (3.5) BS02 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601729 7ad9:D (3.5) BS03 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601730 7ad9:D (3.5) BS04 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601731 7ad9:D (3.5) BS05 ADP 3.6.4.- GO:0000287 ... P68135 33216759
    601732 7ad9:F (3.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601733 7ad9:F (3.5) BS02 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601734 7ad9:F (3.5) BS03 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601735 7ad9:F (3.5) BS04 ADP 3.6.4.- GO:0000287 ... P68135 33216759
    601736 7ad9:H (3.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601737 7ad9:H (3.5) BS02 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601738 7ad9:H (3.5) BS03 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601739 7ad9:H (3.5) BS04 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601740 7ad9:H (3.5) BS05 ADP 3.6.4.- GO:0000287 ... P68135 33216759
    601741 7ad9:I (3.5) BS01 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601742 7ad9:I (3.5) BS02 peptide 3.6.4.- GO:0000287 ... P68135 33216759
    601743 7ad9:I (3.5) BS03 ADP 3.6.4.- GO:0000287 ... P68135 33216759
    601744 7adb:X (4.4) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601745 7adb:X (4.4) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601746 7adb:X (4.4) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601747 7adb:Y (4.4) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601748 7adb:Y (4.4) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601749 7adb:Y (4.4) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601750 7adb:Y (4.4) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601751 7adb:Y (4.4) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601752 7adb:a (4.4) BS01 dna 3.6.4.- GO:0003676 ... P0AG30 33243850
    601753 7adb:b (4.4) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601754 7adb:c (4.4) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601755 7adb:d (4.4) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601756 7adb:e (4.4) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601757 7adb:f (4.4) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601758 7adc:X (4.0) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601759 7adc:X (4.0) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601760 7adc:X (4.0) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601761 7adc:Y (4.0) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601762 7adc:Y (4.0) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601763 7adc:Y (4.0) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601764 7adc:Y (4.0) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601765 7adc:Y (4.0) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601766 7adc:Y (4.0) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601767 7adc:a (4.0) BS01 dna 3.6.4.- GO:0003676 ... P0AG30 33243850
    601768 7adc:a (4.0) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601769 7adc:a (4.0) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 33243850
    601770 7adc:a (4.0) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601771 7adc:b (4.0) BS01 dna 3.6.4.- GO:0003676 ... P0AG30 33243850
    601772 7adc:b (4.0) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601773 7adc:b (4.0) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 33243850
    601774 7adc:b (4.0) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601775 7adc:c (4.0) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601776 7adc:c (4.0) BS02 BEF 3.6.4.- GO:0003676 ... P0AG30 33243850
    601777 7adc:c (4.0) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601778 7adc:d (4.0) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601779 7adc:e (4.0) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601780 7adc:f (4.0) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 33243850
    601781 7add:X (4.3) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601782 7add:X (4.3) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601783 7add:X (4.3) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 33243850
    601784 7add:Y (4.3) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601785 7add:Y (4.3) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601786 7add:Y (4.3) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601787 7add:Y (4.3) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601788 7add:Y (4.3) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601789 7add:Y (4.3) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 33243850
    601790 7add:a (4.3) BS01 dna 3.6.4.- GO:0003676 ... P0AG30 33243850
    601791 7add:a (4.3) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601792 7add:a (4.3) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 33243850
    601793 7add:a (4.3) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601794 7add:b (4.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601795 7add:c (4.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601796 7add:c (4.3) BS02 BEF 3.6.4.- GO:0003676 ... P0AG30 33243850
    601797 7add:c (4.3) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601798 7add:d (4.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850
    601799 7add:d (4.3) BS02 MG 3.6.4.- GO:0003676 ... P0AG30 33243850
    601800 7add:d (4.3) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 33243850

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).