SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    602401 7aih:BB (3.6) BS01 rna ? N/A Q4Q4D6 33168716
    602402 7aih:BD (3.6) BS01 ZN ? GO:0005737 ... Q4QE11 33168716
    602403 7aih:BE (3.6) BS01 rna ? GO:0005739 ... Q4QE16 33168716
    602404 7aih:BF (3.6) BS01 rna ? N/A Q4QIQ1 33168716
    602405 7aih:BG (3.6) BS01 rna ? N/A A0A504WW14 33168716
    602406 7aih:BH (3.6) BS01 rna 5.2.1.8 GO:0000413 ... Q4QBK2 33168716
    602407 7aih:BL (3.6) BS01 rna ? GO:0003723 ... Q4QIE1 33168716
    602408 7aih:BO (3.6) BS01 rna ? GO:0003735 ... Q4Q2G1 33168716
    602409 7aih:BP (3.6) BS01 rna ? N/A Q4QGE0 33168716
    602410 7aih:Bj (3.6) BS01 rna ? N/A Q4Q0E1 33168716
    602411 7aih:C (3.6) BS01 rna ? GO:0005737 ... Q4QIE5 33168716
    602412 7aih:D (3.6) BS01 rna ? N/A Q4QI77 33168716
    602413 7aih:E (3.6) BS01 rna ? GO:0003735 ... E9ACT9 33168716
    602414 7aih:F (3.6) BS01 rna ? GO:0003729 ... Q4Q2H6 33168716
    602415 7aih:G (3.6) BS01 rna ? GO:0003735 ... Q4QF19 33168716
    602416 7aih:G (3.6) BS02 NAD ? GO:0003735 ... Q4QF19 33168716
    602417 7aih:H (3.6) BS01 rna ? GO:0003735 ... Q4QFP0 33168716
    602418 7aih:I (3.6) BS01 rna ? GO:0003735 ... Q4QF04 33168716
    602419 7aih:J (3.6) BS01 rna ? GO:0005737 ... Q4QCY7 33168716
    602420 7aih:K (3.6) BS01 rna ? GO:0003735 ... Q4Q192 33168716
    602421 7aih:L (3.6) BS01 rna ? GO:0003723 ... Q4QFQ5 33168716
    602422 7aih:M (3.6) BS01 rna ? GO:0003735 ... Q4QBR0 33168716
    602423 7aih:N (3.6) BS01 rna ? GO:0003735 ... Q4QA05 33168716
    602424 7aih:O (3.6) BS01 rna ? GO:0003723 ... Q4Q9S7 33168716
    602425 7aih:P (3.6) BS01 rna ? GO:0005737 ... Q4QG34 33168716
    602426 7aih:Q (3.6) BS01 rna ? GO:0003735 ... Q4Q719 33168716
    602427 7aih:R (3.6) BS01 rna ? GO:0003735 ... Q9XZY7 33168716
    602428 7aih:S (3.6) BS01 rna ? GO:0016020 ... Q9U0Z7 33168716
    602429 7aih:T (3.6) BS01 rna ? GO:0005634 ... Q4Q2W9 33168716
    602430 7aih:T (3.6) BS02 ZN ? GO:0005634 ... Q4Q2W9 33168716
    602431 7aih:U (3.6) BS01 rna ? GO:0005840 ... Q4Q2Q8 33168716
    602432 7aih:UA (3.6) BS01 rna N/A N/A N/A 33168716
    602433 7aih:UB (3.6) BS01 rna N/A N/A N/A 33168716
    602434 7aih:V (3.6) BS01 rna ? N/A Q4QCK6 33168716
    602435 7aih:W (3.6) BS01 rna ? N/A Q4Q6A3 33168716
    602436 7aih:W (3.6) BS02 ZN ? N/A Q4Q6A3 33168716
    602437 7aih:X (3.6) BS01 rna ? N/A Q4Q5A3 33168716
    602438 7aih:Z (3.6) BS01 rna ? N/A Q4Q152 33168716
    602439 7aii:A (2.62) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602440 7aii:A (2.62) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602441 7aii:A (2.62) BS03 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602442 7aii:A (2.62) BS04 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602443 7aii:A (2.62) BS05 RFE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602444 7aii:C (2.62) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602445 7aii:C (2.62) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602446 7aii:C (2.62) BS03 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602447 7aii:C (2.62) BS04 MN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602448 7aii:C (2.62) BS05 RFE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602449 7aij:A (2.95) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602450 7aij:A (2.95) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602451 7aij:C (2.95) BS01 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602452 7aij:C (2.95) BS02 dna 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602453 7aij:C (2.95) BS03 RFE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 33356231
    602454 7aik:A (2.1) BS01 FE2 1.17.4.1 GO:0009263 ... O67475 34941255
    602455 7aik:A (2.1) BS02 FE2 1.17.4.1 GO:0009263 ... O67475 34941255
    602456 7ail:A (1.73) BS01 FE2 1.17.4.1 GO:0009263 ... O67475 34941255
    602457 7aip:A (3.12) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602458 7aip:A (3.12) BS02 MG ? GO:0005515 ... Q9UP95 34031912
    602459 7aip:B (3.12) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602460 7aip:B (3.12) BS02 MG ? GO:0005515 ... Q9UP95 34031912
    602461 7aiq:A (3.72) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602462 7aiq:B (3.72) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602463 7air:A (3.66) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602464 7air:B (3.66) BS01 ATP ? GO:0005515 ... Q9UP95 34031912
    602465 7ais:A (1.75) BS01 8UH 3.1.1.7 GO:0001507 ... P04058 33356266
    602466 7ais:B (1.75) BS01 8UH 3.1.1.7 GO:0001507 ... P04058 33356266
    602467 7ait:A (2.1) BS01 8UK 3.1.1.7 GO:0001507 ... P04058 33356266
    602468 7ait:B (2.1) BS01 8UK 3.1.1.7 GO:0001507 ... P04058 33356266
    602469 7aiu:A (1.996) BS01 8UQ 3.1.1.7 GO:0001507 ... P04058 33356266
    602470 7aiu:B (1.996) BS01 8UQ 3.1.1.7 GO:0001507 ... P04058 33356266
    602471 7aiv:B (2.55) BS01 8UE 3.1.1.7 GO:0001507 ... P04058 33356266
    602472 7aiw:A (1.9) BS01 8U5 3.1.1.7 GO:0001507 ... P04058 33356266
    602473 7aiw:B (1.9) BS01 8U5 3.1.1.7 GO:0001507 ... P04058 33356266
    602474 7aix:A (1.86) BS01 8U2 3.1.1.7 GO:0001507 ... P04058 33356266
    602475 7aiy:A (2.937) BS01 8U2 3.1.1.8 GO:0004104 ... P06276 33356266
    602476 7aiz:A (1.05) BS01 D6N 1.18.6.1 GO:0005524 ... P16855 34049880
    602477 7aiz:A (1.05) BS02 BCT 1.18.6.1 GO:0005524 ... P16855 34049880
    602478 7aiz:A (1.05) BS03 CMO 1.18.6.1 GO:0005524 ... P16855 34049880
    602479 7aiz:A (1.05) BS04 CMO 1.18.6.1 GO:0005524 ... P16855 34049880
    602480 7aiz:A (1.05) BS05 CLF 1.18.6.1 GO:0005524 ... P16855 34049880
    602481 7aiz:B (1.05) BS01 CLF 1.18.6.1 GO:0005524 ... P16856 34049880
    602482 7aiz:D (1.05) BS01 D6N 1.18.6.1 GO:0005524 ... P16855 34049880
    602483 7aiz:D (1.05) BS02 BCT 1.18.6.1 GO:0005524 ... P16855 34049880
    602484 7aiz:D (1.05) BS03 CMO 1.18.6.1 GO:0005524 ... P16855 34049880
    602485 7aiz:D (1.05) BS04 CMO 1.18.6.1 GO:0005524 ... P16855 34049880
    602486 7aiz:D (1.05) BS05 CLF 1.18.6.1 GO:0005524 ... P16855 34049880
    602487 7aiz:E (1.05) BS01 CLF 1.18.6.1 GO:0005524 ... P16856 34049880
    602488 7aj0:A (2.5) BS01 CA N/A N/A N/A 34593864
    602489 7aj0:B (2.5) BS01 CA N/A N/A N/A 34593864
    602490 7aj0:C (2.5) BS01 CA N/A N/A N/A 34593864
    602491 7aj0:D (2.5) BS01 CA N/A N/A N/A 34593864
    602492 7aj0:E (2.5) BS01 CA N/A N/A N/A 34593864
    602493 7aj0:F (2.5) BS01 CA N/A N/A N/A 34593864
    602494 7aj2:A (2.1) BS01 RJ5 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602495 7aj4:A (2.0) BS01 RHZ 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602496 7aj5:A (2.0) BS01 RHW 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602497 7aj7:A (2.9) BS01 RHT 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602498 7aj8:A (2.0) BS01 RJ8 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602499 7aja:A (2.2) BS01 RJ2 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602500 7ajk:BBB (3.1) BS01 MG 3.6.5.2 GO:0001764 ... P63000 33217330
    602501 7ajk:BBB (3.1) BS02 GNP 3.6.5.2 GO:0001764 ... P63000 33217330
    602502 7ajm:A (2.4) BS01 RKW 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602503 7ajm:B (2.4) BS01 RKW 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602504 7ajn:A (1.48) BS01 RGW ? N/A O60885 N/A
    602505 7ajo:A (1.85) BS01 S2K ? GO:0000270 ... Q9KSI8 N/A
    602506 7ajq:A (4.0) BS01 peptide N/A GO:0016020 ... N/A 35418619
    602507 7ajq:B (4.0) BS01 peptide N/A GO:0016020 ... N/A 35418619
    602508 7ajq:C (4.0) BS01 peptide N/A GO:0016020 ... N/A 35418619
    602509 7ajq:D (4.0) BS01 peptide N/A GO:0016020 ... N/A 35418619
    602510 7ajq:E (4.0) BS01 peptide N/A GO:0016020 ... N/A 35418619
    602511 7ajr:AAA (1.75) BS01 RJB 3.4.24.- GO:0004222 ... E3ULB4 33603968
    602512 7ajr:AAA (1.75) BS02 ZN 3.4.24.- GO:0004222 ... E3ULB4 33603968
    602513 7ajs:A (2.15) BS01 RKH 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602514 7ajs:B (2.15) BS01 RKH 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 33975430
    602515 7ajt:CD (4.6) BS01 rna ? GO:0000154 ... Q12460 33326748
    602516 7ajt:CD (4.6) BS02 rna ? GO:0000154 ... Q12460 33326748
    602517 7ajt:CE (4.6) BS01 rna ? GO:0000447 ... Q12499 33326748
    602518 7ajt:CE (4.6) BS02 rna ? GO:0000447 ... Q12499 33326748
    602519 7ajt:CF (4.6) BS01 rna ? GO:0000245 ... P39990 33326748
    602520 7ajt:CG (4.6) BS01 rna ? GO:0000245 ... P39990 33326748
    602521 7ajt:CH (4.6) BS01 rna ? GO:0000447 ... Q06506 33326748
    602522 7ajt:CI (4.6) BS01 rna ? GO:0003723 ... P32899 33326748
    602523 7ajt:CI (4.6) BS02 rna ? GO:0003723 ... P32899 33326748
    602524 7ajt:CJ (4.6) BS01 rna ? GO:0005515 ... P53941 33326748
    602525 7ajt:CK (4.6) BS01 rna ? GO:0000447 ... P47083 33326748
    602526 7ajt:CL (4.6) BS01 rna ? GO:0000462 ... Q08965 33326748
    602527 7ajt:CL (4.6) BS02 rna ? GO:0000462 ... Q08965 33326748
    602528 7ajt:CL (4.6) BS03 rna ? GO:0000462 ... Q08965 33326748
    602529 7ajt:CL (4.6) BS04 GTP ? GO:0000462 ... Q08965 33326748
    602530 7ajt:CL (4.6) BS05 MG ? GO:0000462 ... Q08965 33326748
    602531 7ajt:CM (4.6) BS01 rna ? GO:0000447 ... Q08096 33326748
    602532 7ajt:CN (4.6) BS01 rna ? GO:0000028 ... P25368 33326748
    602533 7ajt:DA (4.6) BS01 rna ? GO:0000462 ... P33442 33326748
    602534 7ajt:DE (4.6) BS01 rna ? GO:0002181 ... P0CX35 33326748
    602535 7ajt:DF (4.6) BS01 rna ? GO:0000028 ... P26783 33326748
    602536 7ajt:DG (4.6) BS01 rna ? GO:0000462 ... P0CX37 33326748
    602537 7ajt:DH (4.6) BS01 rna ? GO:0002181 ... P26786 33326748
    602538 7ajt:DI (4.6) BS01 rna ? GO:0000462 ... P0CX39 33326748
    602539 7ajt:DJ (4.6) BS01 rna ? GO:0000462 ... O13516 33326748
    602540 7ajt:DL (4.6) BS01 rna ? GO:0000028 ... P0CX47 33326748
    602541 7ajt:DN (4.6) BS01 rna ? GO:0000462 ... P05756 33326748
    602542 7ajt:DO (4.6) BS01 rna ? GO:0000028 ... P06367 33326748
    602543 7ajt:DQ (4.6) BS01 rna ? GO:0000462 ... P0CX51 33326748
    602544 7ajt:DQ (4.6) BS02 rna ? GO:0000462 ... P0CX51 33326748
    602545 7ajt:DW (4.6) BS01 rna ? GO:0002181 ... P0C0W1 33326748
    602546 7ajt:DX (4.6) BS01 rna ? GO:0000462 ... P0CX29 33326748
    602547 7ajt:DY (4.6) BS01 rna ? GO:0000462 ... P0CX31 33326748
    602548 7ajt:Db (4.6) BS01 rna ? GO:0000028 ... P35997 33326748
    602549 7ajt:Db (4.6) BS02 ZN ? GO:0000028 ... P35997 33326748
    602550 7ajt:Dc (4.6) BS01 rna ? GO:0000028 ... Q3E7X9 33326748
    602551 7ajt:EH (4.6) BS01 rna ? GO:0000176 ... Q08285 33326748
    602552 7ajt:EN (4.6) BS01 rna 3.6.4.13 GO:0000292 ... P47047 33326748
    602553 7ajt:JA (4.6) BS01 rna 2.3.1.- GO:0000049 ... P53914 33326748
    602554 7ajt:JC (4.6) BS01 rna ? GO:0000462 ... P48234 33326748
    602555 7ajt:JG (4.6) BS01 rna 2.1.1.260 GO:0000447 ... Q06287 33326748
    602556 7ajt:JH (4.6) BS01 rna ? GO:0000447 ... P38333 33326748
    602557 7ajt:JJ (4.6) BS01 rna ? GO:0000056 ... Q99216 33326748
    602558 7ajt:JK (4.6) BS01 rna ? GO:0000462 ... Q06631 33326748
    602559 7ajt:JM (4.6) BS01 rna ? GO:0000447 ... Q12035 33326748
    602560 7ajt:JM (4.6) BS02 rna ? GO:0000447 ... Q12035 33326748
    602561 7ajt:JN (4.6) BS01 rna ? GO:0000462 ... P40546 33326748
    602562 7ajt:JN (4.6) BS02 rna ? GO:0000462 ... P40546 33326748
    602563 7ajt:JO (4.6) BS01 rna ? GO:0000447 ... P25586 33326748
    602564 7ajt:JP (4.6) BS01 rna ? GO:0000462 ... P33750 33326748
    602565 7ajt:JP (4.6) BS02 rna ? GO:0000462 ... P33750 33326748
    602566 7ajt:JP (4.6) BS03 rna ? GO:0000462 ... P33750 33326748
    602567 7ajt:JQ (4.6) BS01 rna ? GO:0003674 ... P40470 33326748
    602568 7ajt:UA (4.6) BS01 rna ? GO:0000028 ... P25635 33326748
    602569 7ajt:UA (4.6) BS02 rna ? GO:0000028 ... P25635 33326748
    602570 7ajt:UA (4.6) BS03 rna ? GO:0000028 ... P25635 33326748
    602571 7ajt:UB (4.6) BS01 rna ? GO:0000028 ... Q99207 33326748
    602572 7ajt:UB (4.6) BS02 rna ? GO:0000028 ... Q99207 33326748
    602573 7ajt:UC (4.6) BS01 rna ? GO:0000447 ... Q12136 33326748
    602574 7ajt:UD (4.6) BS01 rna ? GO:0000462 ... Q06679 33326748
    602575 7ajt:UE (4.6) BS01 rna ? GO:0000462 ... Q04177 33326748
    602576 7ajt:UF (4.6) BS01 rna ? GO:0000447 ... Q02354 33326748
    602577 7ajt:UG (4.6) BS01 rna ? GO:0000447 ... P40055 33326748
    602578 7ajt:UG (4.6) BS02 rna ? GO:0000447 ... P40055 33326748
    602579 7ajt:UG (4.6) BS03 rna ? GO:0000447 ... P40055 33326748
    602580 7ajt:UJ (4.6) BS01 rna ? GO:0000447 ... P42945 33326748
    602581 7ajt:UK (4.6) BS01 rna ? GO:0000447 ... P34247 33326748
    602582 7ajt:UK (4.6) BS02 rna ? GO:0000447 ... P34247 33326748
    602583 7ajt:UK (4.6) BS03 rna ? GO:0000447 ... P34247 33326748
    602584 7ajt:UL (4.6) BS01 rna ? GO:0000447 ... Q12220 33326748
    602585 7ajt:UM (4.6) BS01 rna ? GO:0000447 ... Q05946 33326748
    602586 7ajt:UN (4.6) BS01 rna ? GO:0000447 ... Q04500 33326748
    602587 7ajt:UN (4.6) BS02 rna ? GO:0000447 ... Q04500 33326748
    602588 7ajt:UO (4.6) BS01 rna ? GO:0000462 ... Q04305 33326748
    602589 7ajt:UO (4.6) BS02 rna ? GO:0000462 ... Q04305 33326748
    602590 7ajt:UP (4.6) BS01 rna ? GO:0000447 ... Q08492 33326748
    602591 7ajt:UQ (4.6) BS01 rna ? GO:0000462 ... Q02931 33326748
    602592 7ajt:UQ (4.6) BS02 rna ? GO:0000462 ... Q02931 33326748
    602593 7ajt:UR (4.6) BS01 rna ? GO:0000292 ... P40362 33326748
    602594 7ajt:UR (4.6) BS02 rna ? GO:0000292 ... P40362 33326748
    602595 7ajt:US (4.6) BS01 rna ? GO:0000028 ... Q06512 33326748
    602596 7ajt:UT (4.6) BS01 rna ? GO:0000447 ... P35194 33326748
    602597 7ajt:UU (4.6) BS01 rna ? GO:0003674 ... Q06078 33326748
    602598 7ajt:UU (4.6) BS02 rna ? GO:0003674 ... Q06078 33326748
    602599 7ajt:UV (4.6) BS01 rna ? GO:0000028 ... P53254 33326748
    602600 7ajt:UX (4.6) BS01 rna ? GO:0000447 ... Q05498 33326748

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).