SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    602801 7aky:A (1.4) BS01 97N ? GO:0005216 ... F2Y337 33177509
    602802 7al2:A (2.701) BS01 peptide ? GO:0090529 ... A5UK83 34088904
    602803 7al4:A (3.0) BS01 FAD N/A GO:0004499 ... N/A 33759784
    602804 7al4:A (3.0) BS02 NAP N/A GO:0004499 ... N/A 33759784
    602805 7al4:B (3.0) BS01 FAD N/A GO:0004499 ... N/A 33759784
    602806 7al4:B (3.0) BS02 NAP N/A GO:0004499 ... N/A 33759784
    602807 7al4:C (3.0) BS01 FAD N/A GO:0004499 ... N/A 33759784
    602808 7al4:C (3.0) BS02 NAP N/A GO:0004499 ... N/A 33759784
    602809 7al4:D (3.0) BS01 FAD N/A GO:0004499 ... N/A 33759784
    602810 7al4:D (3.0) BS02 NAP N/A GO:0004499 ... N/A 33759784
    602811 7al8:E (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    602812 7al8:H (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    602813 7al8:Q (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    602814 7al8:T (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    602815 7al9:A (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602816 7al9:A (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602817 7al9:B (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602818 7al9:B (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602819 7al9:C (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602820 7al9:C (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602821 7al9:D (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602822 7al9:D (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602823 7al9:E (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602824 7al9:E (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602825 7al9:F (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602826 7al9:F (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602827 7al9:G (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602828 7al9:G (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602829 7al9:H (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602830 7al9:H (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602831 7al9:I (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602832 7al9:I (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602833 7al9:J (1.745) BS01 PHE ? GO:0005515 ... P30047 33229582
    602834 7al9:J (1.745) BS02 PHE ? GO:0005515 ... P30047 33229582
    602835 7ala:A (1.846) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602836 7ala:A (1.846) BS02 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602837 7ala:A (1.846) BS03 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602838 7ala:B (1.846) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602839 7ala:B (1.846) BS02 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602840 7ala:B (1.846) BS03 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602841 7ala:C (1.846) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602842 7ala:C (1.846) BS02 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602843 7ala:C (1.846) BS03 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602844 7ala:D (1.846) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602845 7ala:D (1.846) BS02 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602846 7ala:D (1.846) BS03 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602847 7ala:E (1.846) BS01 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602848 7ala:E (1.846) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602849 7ala:E (1.846) BS03 5RW 3.5.4.16 GO:0003934 ... P30793 33229582
    602850 7alb:A (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602851 7alb:A (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602852 7alb:A (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602853 7alb:B (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602854 7alb:B (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602855 7alb:B (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602856 7alb:C (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602857 7alb:C (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602858 7alb:C (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602859 7alb:D (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602860 7alb:D (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602861 7alb:D (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602862 7alb:E (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602863 7alb:E (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602864 7alb:E (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602865 7alb:F (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602866 7alb:F (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602867 7alb:F (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602868 7alb:G (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602869 7alb:G (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602870 7alb:G (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602871 7alb:H (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602872 7alb:H (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602873 7alb:H (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602874 7alb:I (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602875 7alb:I (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602876 7alb:I (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602877 7alb:J (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602878 7alb:J (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602879 7alb:J (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602880 7alb:K (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602881 7alb:K (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602882 7alb:K (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602883 7alb:L (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602884 7alb:L (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602885 7alb:L (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602886 7alb:M (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602887 7alb:M (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602888 7alb:M (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602889 7alb:N (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602890 7alb:N (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602891 7alb:N (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602892 7alb:O (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602893 7alb:O (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602894 7alb:O (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602895 7alb:P (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602896 7alb:P (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602897 7alb:P (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602898 7alb:Q (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602899 7alb:Q (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602900 7alb:Q (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602901 7alb:R (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602902 7alb:R (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602903 7alb:R (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602904 7alb:S (1.979) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602905 7alb:S (1.979) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602906 7alb:S (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602907 7alb:T (1.979) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602908 7alb:T (1.979) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602909 7alb:T (1.979) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33229582
    602910 7alb:a (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602911 7alb:a (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602912 7alb:b (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602913 7alb:b (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602914 7alb:c (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602915 7alb:c (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602916 7alb:d (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602917 7alb:d (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602918 7alb:e (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602919 7alb:e (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602920 7alb:f (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602921 7alb:f (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602922 7alb:g (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602923 7alb:g (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602924 7alb:h (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602925 7alb:h (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602926 7alb:i (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602927 7alb:i (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602928 7alb:j (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602929 7alb:j (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602930 7alb:k (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602931 7alb:k (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602932 7alb:l (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602933 7alb:l (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602934 7alb:m (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602935 7alb:m (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602936 7alb:n (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602937 7alb:n (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602938 7alb:o (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602939 7alb:o (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602940 7alb:p (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602941 7alb:p (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602942 7alb:q (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602943 7alb:q (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602944 7alb:r (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602945 7alb:r (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602946 7alb:s (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602947 7alb:s (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602948 7alb:t (1.979) BS01 PHE ? GO:0005515 ... P30047 33229582
    602949 7alb:t (1.979) BS02 PHE ? GO:0005515 ... P30047 33229582
    602950 7alc:A (1.726) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602951 7alc:B (1.726) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602952 7alc:C (1.726) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602953 7alc:D (1.726) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602954 7alc:E (1.726) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33229582
    602955 7alc:F (1.726) BS01 PHE ? GO:0005515 ... P30047 33229582
    602956 7alc:F (1.726) BS02 PHE ? GO:0005515 ... P30047 33229582
    602957 7alc:G (1.726) BS01 PHE ? GO:0005515 ... P30047 33229582
    602958 7alc:G (1.726) BS02 PHE ? GO:0005515 ... P30047 33229582
    602959 7alc:H (1.726) BS01 PHE ? GO:0005515 ... P30047 33229582
    602960 7alc:H (1.726) BS02 PHE ? GO:0005515 ... P30047 33229582
    602961 7alc:I (1.726) BS01 PHE ? GO:0005515 ... P30047 33229582
    602962 7alc:I (1.726) BS02 PHE ? GO:0005515 ... P30047 33229582
    602963 7alc:J (1.726) BS01 PHE ? GO:0005515 ... P30047 33229582
    602964 7alc:J (1.726) BS02 PHE ? GO:0005515 ... P30047 33229582
    602965 7ale:A (2.95) BS01 RLK 4.1.1.21
    6.3.2.6
    GO:0004638 ... P22234 N/A
    602966 7ale:A (2.95) BS02 OK8 4.1.1.21
    6.3.2.6
    GO:0004638 ... P22234 N/A
    602967 7ale:B (2.95) BS01 RLK 4.1.1.21
    6.3.2.6
    GO:0004638 ... P22234 N/A
    602968 7ale:B (2.95) BS02 OK8 4.1.1.21
    6.3.2.6
    GO:0004638 ... P22234 N/A
    602969 7alf:A (1.261) BS01 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602970 7alf:A (1.261) BS02 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602971 7alf:A (1.261) BS03 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602972 7alf:B (1.261) BS01 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602973 7alf:B (1.261) BS02 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602974 7alf:B (1.261) BS03 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602975 7alf:B (1.261) BS04 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602976 7alg:A (1.452) BS01 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602977 7alg:A (1.452) BS02 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602978 7alg:A (1.452) BS03 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602979 7alg:B (1.452) BS01 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602980 7alg:B (1.452) BS02 EVB ? GO:0030246 ... A0A0S4TLR1 33470808
    602981 7alg:B (1.452) BS03 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602982 7alg:B (1.452) BS04 BDF ? GO:0030246 ... A0A0S4TLR1 33470808
    602983 7alj:A (1.52) BS01 BGC ? GO:0005509 ... P07207 34347930
    602984 7alj:A (1.52) BS02 XYP ? GO:0005509 ... P07207 34347930
    602985 7alj:A (1.52) BS03 CA ? GO:0005509 ... P07207 34347930
    602986 7alj:A (1.52) BS04 CA ? GO:0005509 ... P07207 34347930
    602987 7alj:A (1.52) BS05 FUC ? GO:0005509 ... P07207 34347930
    602988 7alj:A (1.52) BS06 BGC ? GO:0005509 ... P07207 34347930
    602989 7all:AAA (1.63) BS01 GAL ? GO:0004065 ... Q89YP8 34616040
    602990 7all:AAA (1.63) BS02 CA ? GO:0004065 ... Q89YP8 34616040
    602991 7aln:A (3.77) BS01 ADP 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602992 7aln:A (3.77) BS02 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602993 7aln:A (3.77) BS03 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602994 7aln:B (3.77) BS01 ADP 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602995 7aln:C (3.77) BS01 ADP 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602996 7aln:C (3.77) BS02 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602997 7aln:D (3.77) BS01 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602998 7aln:D (3.77) BS02 ADP 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    602999 7aln:E (3.77) BS01 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    603000 7aln:E (3.77) BS02 ADP 3.6.4.- GO:0005200 ... Q8I4X0 33767187

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).