SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    603001 7aln:E (3.77) BS03 9UE 3.6.4.- GO:0005200 ... Q8I4X0 33767187
    603002 7alo:A (1.8) BS01 peptide ? N/A A0A2R7Z5J3 34244493
    603003 7alo:D (1.8) BS01 peptide ? N/A A0A2R7Z5J3 34244493
    603004 7alp:U (3.4) BS01 MG 2.7.7.48
    3.1.-.-
    GO:0001172 ... I0DF35 33927385
    603005 7alq:A (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603006 7alq:A (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603007 7alq:A (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603008 7alq:A (2.205) BS04 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603009 7alq:A (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603010 7alq:B (2.205) BS01 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603011 7alq:B (2.205) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603012 7alq:B (2.205) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603013 7alq:B (2.205) BS04 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603014 7alq:B (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603015 7alq:C (2.205) BS01 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603016 7alq:C (2.205) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603017 7alq:C (2.205) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603018 7alq:C (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603019 7alq:C (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603020 7alq:D (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603021 7alq:D (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603022 7alq:D (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603023 7alq:D (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603024 7alq:D (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603025 7alq:E (2.205) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603026 7alq:E (2.205) BS02 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603027 7alq:E (2.205) BS03 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603028 7alq:E (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603029 7alq:E (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603030 7alq:E (2.205) BS06 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603031 7alq:F (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603032 7alq:F (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603033 7alq:F (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603034 7alq:F (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603035 7alq:F (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603036 7alq:G (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603037 7alq:G (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603038 7alq:G (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603039 7alq:G (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603040 7alq:G (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603041 7alq:H (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603042 7alq:H (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603043 7alq:H (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603044 7alq:H (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603045 7alq:H (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603046 7alq:I (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603047 7alq:I (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603048 7alq:I (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603049 7alq:I (2.205) BS04 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603050 7alq:I (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603051 7alq:J (2.205) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603052 7alq:J (2.205) BS02 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603053 7alq:J (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603054 7alq:J (2.205) BS04 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603055 7alq:J (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603056 7alq:K (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603057 7alq:K (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603058 7alq:K (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603059 7alq:K (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603060 7alq:K (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603061 7alq:L (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603062 7alq:L (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603063 7alq:L (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603064 7alq:L (2.205) BS04 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603065 7alq:L (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603066 7alq:M (2.205) BS01 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603067 7alq:M (2.205) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603068 7alq:M (2.205) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603069 7alq:M (2.205) BS04 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603070 7alq:M (2.205) BS05 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603071 7alq:N (2.205) BS01 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603072 7alq:N (2.205) BS02 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603073 7alq:N (2.205) BS03 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603074 7alq:N (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603075 7alq:N (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603076 7alq:O (2.205) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603077 7alq:O (2.205) BS02 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603078 7alq:O (2.205) BS03 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603079 7alq:O (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603080 7alq:O (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603081 7alq:P (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603082 7alq:P (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603083 7alq:P (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603084 7alq:P (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603085 7alq:P (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603086 7alq:Q (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603087 7alq:Q (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603088 7alq:Q (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603089 7alq:Q (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603090 7alq:Q (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603091 7alq:R (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603092 7alq:R (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603093 7alq:R (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603094 7alq:R (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603095 7alq:R (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603096 7alq:S (2.205) BS01 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603097 7alq:S (2.205) BS02 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603098 7alq:S (2.205) BS03 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603099 7alq:S (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603100 7alq:S (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603101 7alq:T (2.205) BS01 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603102 7alq:T (2.205) BS02 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603103 7alq:T (2.205) BS03 ZN 3.5.4.16 GO:0003934 ... P30793 33387654
    603104 7alq:T (2.205) BS04 QBQ 3.5.4.16 GO:0003934 ... P30793 33387654
    603105 7alq:T (2.205) BS05 HBI 3.5.4.16 GO:0003934 ... P30793 33387654
    603106 7alr:A (1.93) BS01 GLY 3.6.5.- GO:0000226 ... P81947 33619102
    603107 7alr:A (1.93) BS02 GTP 3.6.5.- GO:0000226 ... P81947 33619102
    603108 7alr:A (1.93) BS03 RQK 3.6.5.- GO:0000226 ... P81947 33619102
    603109 7alr:B (1.93) BS01 RQK ? GO:0000226 ... Q2T9S0 33619102
    603110 7alr:B (1.93) BS02 GDP ? GO:0000226 ... Q2T9S0 33619102
    603111 7als:A (1.35) BS01 BGC ? GO:0030246 ... O00214 N/A
    603112 7als:A (1.35) BS02 GAL ? GO:0030246 ... O00214 N/A
    603113 7als:A (1.35) BS03 GLC ? GO:0030246 ... O00214 N/A
    603114 7als:A (1.35) BS04 GAL ? GO:0030246 ... O00214 N/A
    603115 7als:B (1.35) BS01 BGC ? GO:0030246 ... O00214 N/A
    603116 7als:B (1.35) BS02 GAL ? GO:0030246 ... O00214 N/A
    603117 7als:B (1.35) BS03 GLC ? GO:0030246 ... O00214 N/A
    603118 7als:B (1.35) BS04 GAL ? GO:0030246 ... O00214 N/A
    603119 7alt:A (2.03) BS01 CA ? GO:0007154 ... P18168 34347930
    603120 7alt:B (2.03) BS01 CA ? GO:0007154 ... P18168 34347930
    603121 7alv:A (2.835) BS01 RM5 3.6.4.- N/A Q96P20 34687713
    603122 7alv:A (2.835) BS02 ADP 3.6.4.- N/A Q96P20 34687713
    603123 7alx:AAA (1.8) BS01 UFW 1.15.1.1 GO:0009374 ... P0A609
    P22629
    N/A
    603124 7alx:BBB (1.8) BS01 UFW 1.15.1.1 GO:0009374 ... P0A609
    P22629
    N/A
    603125 7alz:A (1.67) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603126 7alz:A (1.67) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603127 7alz:B (1.67) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603128 7alz:B (1.67) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603129 7am0:A (2.5) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603130 7am0:A (2.5) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603131 7am0:B (2.5) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603132 7am0:B (2.5) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603133 7am0:C (2.5) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603134 7am0:C (2.5) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603135 7am0:D (2.5) BS01 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603136 7am0:D (2.5) BS02 PHE 4.2.1.51 GO:0004106 ... A0A0M0ELU2 34112823
    603137 7am2:A (3.4) BS01 rna ? GO:0003735 ... E9ADK5 33168716
    603138 7am2:Aa (3.4) BS01 rna ? N/A Q4Q183 33168716
    603139 7am2:Ab (3.4) BS01 rna ? GO:0003735 ... Q4Q6A7 33168716
    603140 7am2:Ad (3.4) BS01 rna ? N/A Q4QIB3 33168716
    603141 7am2:Ae (3.4) BS01 rna ? N/A E9ACG2 33168716
    603142 7am2:Af (3.4) BS01 rna ? N/A Q4QJB6 33168716
    603143 7am2:Ag (3.4) BS01 rna ? N/A Q4Q829 33168716
    603144 7am2:Aj (3.4) BS01 rna ? N/A Q4Q728 33168716
    603145 7am2:Al (3.4) BS01 rna ? N/A Q4Q1C8 33168716
    603146 7am2:Am (3.4) BS01 rna ? GO:0003723 ... Q4QC22 33168716
    603147 7am2:Ar (3.4) BS01 rna ? N/A Q4Q712 33168716
    603148 7am2:As (3.4) BS01 rna ? N/A E9ABZ5 33168716
    603149 7am2:At (3.4) BS01 rna ? GO:0005737 ... Q4Q4L5 33168716
    603150 7am2:Au (3.4) BS01 rna ? N/A Q4Q8J6 33168716
    603151 7am2:Aw (3.4) BS01 rna ? N/A E9AD00 33168716
    603152 7am2:Ax (3.4) BS01 rna ? GO:0046872 ... Q4Q7T1 33168716
    603153 7am2:Az (3.4) BS01 rna ? N/A Q4Q4D9 33168716
    603154 7am2:B (3.4) BS01 rna ? GO:0003735 ... Q4QGU6 33168716
    603155 7am2:BB (3.4) BS01 rna ? N/A Q4Q4D6 33168716
    603156 7am2:BF (3.4) BS01 rna ? N/A Q4QIQ1 33168716
    603157 7am2:BG (3.4) BS01 rna ? N/A A0A504WW14 33168716
    603158 7am2:BH (3.4) BS01 rna 5.2.1.8 GO:0000413 ... Q4QBK2 33168716
    603159 7am2:BK (3.4) BS01 rna ? N/A E9AD80 33168716
    603160 7am2:BN (3.4) BS01 rna ? N/A Q4QAP7 33168716
    603161 7am2:BO (3.4) BS01 rna ? GO:0003735 ... Q4Q2G1 33168716
    603162 7am2:BP (3.4) BS01 rna ? N/A Q4QGE0 33168716
    603163 7am2:BQ (3.4) BS01 rna ? N/A Q4QBK0 33168716
    603164 7am2:BR (3.4) BS01 rna ? N/A A0A504XZ90 33168716
    603165 7am2:BS (3.4) BS01 rna ? GO:0005634 ... Q4Q7K0 33168716
    603166 7am2:BT (3.4) BS01 rna ? GO:0003924 ... E9AFZ4 33168716
    603167 7am2:BU (3.4) BS01 rna ? GO:0005525 ... Q4Q9G4 33168716
    603168 7am2:BU (3.4) BS02 GTP ? GO:0005525 ... Q4Q9G4 33168716
    603169 7am2:BV (3.4) BS01 rna ? GO:0005525 ... Q4Q4X0 33168716
    603170 7am2:BW (3.4) BS01 rna ? GO:0003676 ... Q4QHU1 33168716
    603171 7am2:BW (3.4) BS02 rna ? GO:0003676 ... Q4QHU1 33168716
    603172 7am2:BW (3.4) BS03 ATP ? GO:0003676 ... Q4QHU1 33168716
    603173 7am2:BZ (3.4) BS01 rna ? GO:0001522 ... E9AC17 33168716
    603174 7am2:BZ (3.4) BS02 rna ? GO:0001522 ... E9AC17 33168716
    603175 7am2:BZ (3.4) BS03 rna ? GO:0001522 ... E9AC17 33168716
    603176 7am2:C (3.4) BS01 rna ? GO:0005737 ... Q4QIE5 33168716
    603177 7am2:CA (3.4) BS01 rna ? GO:0001522 ... Q4QGU5 33168716
    603178 7am2:CA (3.4) BS02 rna ? GO:0001522 ... Q4QGU5 33168716
    603179 7am2:CB (3.4) BS01 rna 2.7.7.52 GO:0017148 ... Q9NE59 33168716
    603180 7am2:E (3.4) BS01 rna ? GO:0003735 ... E9ACT9 33168716
    603181 7am2:F (3.4) BS01 rna ? GO:0003729 ... Q4Q2H6 33168716
    603182 7am2:G (3.4) BS01 rna ? GO:0003735 ... Q4QF19 33168716
    603183 7am2:I (3.4) BS01 rna ? GO:0003735 ... Q4QF04 33168716
    603184 7am2:J (3.4) BS01 rna ? GO:0005737 ... Q4QCY7 33168716
    603185 7am2:K (3.4) BS01 rna ? GO:0003735 ... Q4Q192 33168716
    603186 7am2:L (3.4) BS01 rna ? GO:0003723 ... Q4QFQ5 33168716
    603187 7am2:M (3.4) BS01 rna ? GO:0003735 ... Q4QBR0 33168716
    603188 7am2:N (3.4) BS01 rna ? GO:0003735 ... Q4QA05 33168716
    603189 7am2:O (3.4) BS01 rna ? GO:0003723 ... Q4Q9S7 33168716
    603190 7am2:Q (3.4) BS01 rna ? GO:0003735 ... Q4Q719 33168716
    603191 7am2:R (3.4) BS01 rna ? GO:0003735 ... Q9XZY7 33168716
    603192 7am2:S (3.4) BS01 rna ? GO:0016020 ... Q9U0Z7 33168716
    603193 7am2:T (3.4) BS01 rna ? GO:0005634 ... Q4Q2W9 33168716
    603194 7am2:U2 (3.4) BS01 rna N/A GO:0050825 ... N/A 33168716
    603195 7am2:U5 (3.4) BS01 rna N/A GO:0050825 ... N/A 33168716
    603196 7am2:UA (3.4) BS01 rna N/A GO:0050825 ... N/A 33168716
    603197 7am2:V (3.4) BS01 rna ? N/A Q4QCK6 33168716
    603198 7am2:Z (3.4) BS01 rna ? N/A Q4Q152 33168716
    603199 7am6:C (2.7) BS01 peptide 3.4.21.62 GO:0004252 ... P00782 33717424
    603200 7am7:C (2.61) BS01 peptide 3.4.21.62 GO:0004252 ... P00782 33717424

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).