SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    60201 1w3x:A (1.46) BS01 FE2 1.21.3.1 GO:0005506 ... P05326 16444759
    60202 1w3x:A (1.46) BS02 W2X 1.21.3.1 GO:0005506 ... P05326 16444759
    60203 1w3y:A (1.65) BS01 PVC 4.2.2.1 GO:0005576 ... Q54873 15322107 MOAD: ic50=100uM
    60204 1w3y:A (1.65) BS02 XYL 4.2.2.1 GO:0005576 ... Q54873 15322107
    60205 1w3y:A (1.65) BS03 XYL 4.2.2.1 GO:0005576 ... Q54873 15322107
    60206 1w44:A (2.0) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60207 1w44:A (2.0) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60208 1w44:B (2.0) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60209 1w44:B (2.0) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60210 1w44:C (2.0) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60211 1w46:A (2.7) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60212 1w46:A (2.7) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60213 1w46:B (2.7) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60214 1w46:B (2.7) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60215 1w46:C (2.7) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60216 1w47:A (2.5) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60217 1w47:A (2.5) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60218 1w47:B (2.5) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60219 1w47:B (2.5) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60220 1w47:C (2.5) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60221 1w48:A (2.3) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60222 1w48:A (2.3) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60223 1w48:B (2.3) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60224 1w48:B (2.3) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60225 1w48:C (2.3) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60226 1w49:A (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60227 1w49:A (2.4) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60228 1w49:B (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60229 1w49:B (2.4) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60230 1w49:C (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60231 1w4a:A (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60232 1w4a:A (2.4) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60233 1w4a:B (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60234 1w4a:B (2.4) BS02 APC ? GO:0000166 ... Q94M05 15369673
    60235 1w4a:C (2.4) BS01 APC ? GO:0000166 ... Q94M05 15369673
    60236 1w4b:A (2.3) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60237 1w4b:A (2.3) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60238 1w4b:B (2.3) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60239 1w4b:B (2.3) BS02 ADP ? GO:0000166 ... Q94M05 15369673
    60240 1w4b:C (2.3) BS01 ADP ? GO:0000166 ... Q94M05 15369673
    60241 1w4l:A (2.16) BS01 GL8 3.1.1.7 GO:0001507 ... P04058 15563167 MOAD: ic50=4nM
    BindingDB: IC50=4nM
    60242 1w4n:A (1.65) BS01 CU 1.4.3.21 GO:0005507 ... P46881 18607080
    60243 1w4n:B (1.65) BS01 CU 1.4.3.21 GO:0005507 ... P46881 18607080
    60244 1w4o:A (1.6) BS01 UA3 4.6.1.18 GO:0003676 ... P61823 15670155 MOAD: Ki=3uM
    BindingDB: Ki=6000nM
    60245 1w4p:A (1.69) BS01 UM3 4.6.1.18 GO:0003676 ... P61823 15670155 MOAD: Ki=18uM
    60246 1w4p:B (1.69) BS01 UM3 4.6.1.18 GO:0003676 ... P61823 15670155 MOAD: Ki=18uM
    60247 1w4q:A (1.68) BS01 UMF 4.6.1.18 GO:0003676 ... P61823 15670155 MOAD: Ki=5.5uM
    60248 1w4q:B (1.68) BS01 UMF 4.6.1.18 GO:0003676 ... P61823 15670155 MOAD: Ki=5.5uM
    60249 1w4r:A (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60250 1w4r:A (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60251 1w4r:B (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60252 1w4r:B (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60253 1w4r:C (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60254 1w4r:C (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60255 1w4r:D (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60256 1w4r:D (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60257 1w4r:E (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60258 1w4r:E (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60259 1w4r:F (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60260 1w4r:F (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60261 1w4r:G (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60262 1w4r:G (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60263 1w4r:H (1.83) BS01 TTP 2.7.1.21 GO:0004797 ... P04183 15733844
    60264 1w4r:H (1.83) BS02 ZN 2.7.1.21 GO:0004797 ... P04183 15733844
    60265 1w4w:A (1.55) BS01 HEM 1.11.1.7 GO:0004601 ... P00433 15641789
    60266 1w4w:A (1.55) BS02 CA 1.11.1.7 GO:0004601 ... P00433 15641789
    60267 1w4w:A (1.55) BS03 CA 1.11.1.7 GO:0004601 ... P00433 15641789
    60268 1w4x:A (1.7) BS01 FAD 1.14.13.92 GO:0004499 ... Q47PU3 15328411
    60269 1w4y:A (1.6) BS01 HEM 1.11.1.7 GO:0004601 ... P00433 15641789
    60270 1w4y:A (1.6) BS02 CA 1.11.1.7 GO:0004601 ... P00433 15641789
    60271 1w4y:A (1.6) BS03 CA 1.11.1.7 GO:0004601 ... P00433 15641789
    60272 1w4y:A (1.6) BS04 CMO 1.11.1.7 GO:0004601 ... P00433 15641789
    60273 1w4z:A (2.5) BS01 NAP 1.3.1.- GO:0006629 ... P16544 15458634
    60274 1w4z:B (2.5) BS01 NAP 1.3.1.- GO:0006629 ... P16544 15458634
    60275 1w51:A (2.55) BS01 L01 3.4.23.46 GO:0004190 ... P56817 15451669 BindingDB: IC50=500nM
    60276 1w52:X (2.99) BS01 CA 3.1.1.26
    3.1.1.3    		 GO:0004806 ... Q95KP4 15502342
    60277 1w52:X (2.99) BS02 CA 3.1.1.26
    3.1.1.3    		 GO:0004806 ... Q95KP4 15502342
    60278 1w54:A (2.2) BS01 ZN 4.2.1.24 GO:0004655 ... Q59643 15644204
    60279 1w55:A (2.3) BS01 C 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60280 1w55:A (2.3) BS02 C 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60281 1w55:A (2.3) BS03 GPP 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60282 1w56:A (1.7) BS01 ZN 4.2.1.24 GO:0004655 ... Q59643 15644204
    60283 1w56:B (1.7) BS01 ZN 4.2.1.24 GO:0004655 ... Q59643 15644204
    60284 1w57:A (3.09) BS01 ZN 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60285 1w57:A (3.09) BS02 C5P 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60286 1w57:A (3.09) BS03 C5P 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60287 1w57:A (3.09) BS04 GPP 2.7.7.60
    4.6.1.12    		 GO:0003824 ... Q9PM68 15466439
    60288 1w58:1 (2.5) BS01 G2P ? GO:0003924 ... Q57816 15558053
    60289 1w5a:A (2.4) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60290 1w5a:B (2.4) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60291 1w5b:A (2.2) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60292 1w5b:B (2.2) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60293 1w5c:A (3.2) BS01 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60294 1w5c:A (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60295 1w5c:A (3.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60296 1w5c:A (3.2) BS04 PHO 1.10.3.9 GO:0005506 ... P0A444 N/A
    60297 1w5c:A (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60298 1w5c:A (3.2) BS06 MN 1.10.3.9 GO:0005506 ... P0A444 N/A
    60299 1w5c:A (3.2) BS07 FE2 1.10.3.9 GO:0005506 ... P0A444 N/A
    60300 1w5c:A (3.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60301 1w5c:A (3.2) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 N/A
    60302 1w5c:B (3.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60303 1w5c:B (3.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60304 1w5c:B (3.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60305 1w5c:B (3.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60306 1w5c:B (3.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60307 1w5c:B (3.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60308 1w5c:B (3.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60309 1w5c:B (3.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60310 1w5c:B (3.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60311 1w5c:B (3.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60312 1w5c:B (3.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60313 1w5c:B (3.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60314 1w5c:B (3.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60315 1w5c:B (3.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60316 1w5c:C (3.2) BS01 CLA ? GO:0005737 ... Q8DIF8 N/A
    60317 1w5c:C (3.2) BS02 CLA ? GO:0005737 ... Q8DIF8 N/A
    60318 1w5c:C (3.2) BS03 CLA ? GO:0005737 ... Q8DIF8 N/A
    60319 1w5c:C (3.2) BS04 CLA ? GO:0005737 ... Q8DIF8 N/A
    60320 1w5c:C (3.2) BS05 CLA ? GO:0005737 ... Q8DIF8 N/A
    60321 1w5c:C (3.2) BS06 CLA ? GO:0005737 ... Q8DIF8 N/A
    60322 1w5c:C (3.2) BS07 CLA ? GO:0005737 ... Q8DIF8 N/A
    60323 1w5c:C (3.2) BS08 CLA ? GO:0005737 ... Q8DIF8 N/A
    60324 1w5c:C (3.2) BS09 CLA ? GO:0005737 ... Q8DIF8 N/A
    60325 1w5c:C (3.2) BS10 CLA ? GO:0005737 ... Q8DIF8 N/A
    60326 1w5c:C (3.2) BS11 CLA ? GO:0005737 ... Q8DIF8 N/A
    60327 1w5c:C (3.2) BS12 CLA ? GO:0005737 ... Q8DIF8 N/A
    60328 1w5c:C (3.2) BS13 CLA ? GO:0005737 ... Q8DIF8 N/A
    60329 1w5c:D (3.2) BS01 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60330 1w5c:D (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60331 1w5c:D (3.2) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60332 1w5c:D (3.2) BS04 FE2 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60333 1w5c:D (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60334 1w5c:D (3.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60335 1w5c:D (3.2) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60336 1w5c:D (3.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60337 1w5c:E (3.2) BS01 HEM ? GO:0005506 ... Q8DIP0 N/A
    60338 1w5c:F (3.2) BS01 HEM ? GO:0005506 ... Q8DIN9 N/A
    60339 1w5c:G (3.2) BS01 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60340 1w5c:G (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60341 1w5c:G (3.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60342 1w5c:G (3.2) BS04 PHO 1.10.3.9 GO:0005506 ... P0A444 N/A
    60343 1w5c:G (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60344 1w5c:G (3.2) BS06 MN 1.10.3.9 GO:0005506 ... P0A444 N/A
    60345 1w5c:G (3.2) BS07 MN 1.10.3.9 GO:0005506 ... P0A444 N/A
    60346 1w5c:G (3.2) BS08 MN 1.10.3.9 GO:0005506 ... P0A444 N/A
    60347 1w5c:G (3.2) BS09 FE2 1.10.3.9 GO:0005506 ... P0A444 N/A
    60348 1w5c:G (3.2) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 N/A
    60349 1w5c:G (3.2) BS11 PHO 1.10.3.9 GO:0005506 ... P0A444 N/A
    60350 1w5c:H (3.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60351 1w5c:H (3.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60352 1w5c:H (3.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60353 1w5c:H (3.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60354 1w5c:H (3.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60355 1w5c:H (3.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60356 1w5c:H (3.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60357 1w5c:H (3.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60358 1w5c:H (3.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60359 1w5c:H (3.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60360 1w5c:H (3.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60361 1w5c:H (3.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60362 1w5c:H (3.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60363 1w5c:H (3.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 N/A
    60364 1w5c:I (3.2) BS01 CLA ? GO:0005737 ... Q8DIF8 N/A
    60365 1w5c:I (3.2) BS02 CLA ? GO:0005737 ... Q8DIF8 N/A
    60366 1w5c:I (3.2) BS03 CLA ? GO:0005737 ... Q8DIF8 N/A
    60367 1w5c:I (3.2) BS04 CLA ? GO:0005737 ... Q8DIF8 N/A
    60368 1w5c:I (3.2) BS05 CLA ? GO:0005737 ... Q8DIF8 N/A
    60369 1w5c:I (3.2) BS06 CLA ? GO:0005737 ... Q8DIF8 N/A
    60370 1w5c:I (3.2) BS07 CLA ? GO:0005737 ... Q8DIF8 N/A
    60371 1w5c:I (3.2) BS08 CLA ? GO:0005737 ... Q8DIF8 N/A
    60372 1w5c:I (3.2) BS09 CLA ? GO:0005737 ... Q8DIF8 N/A
    60373 1w5c:I (3.2) BS10 CLA ? GO:0005737 ... Q8DIF8 N/A
    60374 1w5c:I (3.2) BS11 CLA ? GO:0005737 ... Q8DIF8 N/A
    60375 1w5c:I (3.2) BS12 CLA ? GO:0005737 ... Q8DIF8 N/A
    60376 1w5c:I (3.2) BS13 CLA ? GO:0005737 ... Q8DIF8 N/A
    60377 1w5c:J (3.2) BS01 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60378 1w5c:J (3.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60379 1w5c:J (3.2) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60380 1w5c:J (3.2) BS04 FE2 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60381 1w5c:J (3.2) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60382 1w5c:J (3.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60383 1w5c:J (3.2) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60384 1w5c:J (3.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 N/A
    60385 1w5c:K (3.2) BS01 HEM ? GO:0005506 ... Q8DIP0 N/A
    60386 1w5c:L (3.2) BS01 HEM ? GO:0005506 ... Q8DIN9 N/A
    60387 1w5c:T (3.2) BS01 HEC ? GO:0005506 ... P0A386 N/A
    60388 1w5c:V (3.2) BS01 HEC ? GO:0005506 ... P0A386 N/A
    60389 1w5d:A (2.1) BS01 CA 3.4.16.4 GO:0000270 ... P39844 17582436
    60390 1w5d:A (2.1) BS02 CA 3.4.16.4 GO:0000270 ... P39844 17582436
    60391 1w5e:A (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60392 1w5e:B (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60393 1w5e:C (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60394 1w5e:D (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60395 1w5e:E (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60396 1w5e:F (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60397 1w5e:G (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60398 1w5e:H (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60399 1w5e:I (3.0) BS01 GTP ? GO:0003924 ... Q57816 15558053
    60400 1w5f:A (2.0) BS01 G2P ? GO:0003924 ... O08398 15558053
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).