SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    605201 7azs:L14B (3.1) BS01 rna ? GO:0003735 ... Q5SHP8 36827973
    605202 7azs:L14B (3.1) BS02 rna ? GO:0003735 ... Q5SHP8 36827973
    605203 7azs:L15A (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 36827973
    605204 7azs:L15A (3.1) BS02 OHX ? GO:0003735 ... Q5SHQ7 36827973
    605205 7azs:L15B (3.1) BS01 rna ? GO:0003735 ... Q5SHQ7 36827973
    605206 7azs:L15B (3.1) BS02 OHX ? GO:0003735 ... Q5SHQ7 36827973
    605207 7azs:L16A (3.1) BS01 rna ? GO:0000049 ... P60489 36827973
    605208 7azs:L16A (3.1) BS02 rna ? GO:0000049 ... P60489 36827973
    605209 7azs:L16A (3.1) BS03 rna ? GO:0000049 ... P60489 36827973
    605210 7azs:L16B (3.1) BS01 rna ? GO:0000049 ... P60489 36827973
    605211 7azs:L16B (3.1) BS02 rna ? GO:0000049 ... P60489 36827973
    605212 7azs:L16B (3.1) BS03 rna ? GO:0000049 ... P60489 36827973
    605213 7azs:L17A (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 36827973
    605214 7azs:L17B (3.1) BS01 rna ? GO:0003735 ... Q9Z9H5 36827973
    605215 7azs:L18A (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 36827973
    605216 7azs:L18A (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 36827973
    605217 7azs:L18B (3.1) BS01 rna ? GO:0003735 ... Q5SHQ4 36827973
    605218 7azs:L18B (3.1) BS02 rna ? GO:0003735 ... Q5SHQ4 36827973
    605219 7azs:L19A (3.1) BS01 rna ? GO:0003735 ... P60490 36827973
    605220 7azs:L19A (3.1) BS02 rna ? GO:0003735 ... P60490 36827973
    605221 7azs:L19B (3.1) BS01 rna ? GO:0003735 ... P60490 36827973
    605222 7azs:L19B (3.1) BS02 rna ? GO:0003735 ... P60490 36827973
    605223 7azs:L20A (3.1) BS01 rna ? GO:0000027 ... P60491 36827973
    605224 7azs:L20B (3.1) BS01 rna ? GO:0000027 ... P60491 36827973
    605225 7azs:L20B (3.1) BS02 OHX ? GO:0000027 ... P60491 36827973
    605226 7azs:L21A (3.1) BS01 rna ? GO:0003723 ... P60492 36827973
    605227 7azs:L21B (3.1) BS01 rna ? GO:0003723 ... P60492 36827973
    605228 7azs:L22A (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 36827973
    605229 7azs:L22B (3.1) BS01 rna ? GO:0003735 ... Q5SHP3 36827973
    605230 7azs:L23A (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 36827973
    605231 7azs:L23A (3.1) BS02 MG ? GO:0003735 ... Q5SHP0 36827973
    605232 7azs:L23B (3.1) BS01 rna ? GO:0003735 ... Q5SHP0 36827973
    605233 7azs:L24A (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 36827973
    605234 7azs:L24B (3.1) BS01 rna ? GO:0003723 ... Q5SHP9 36827973
    605235 7azs:L25A (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 36827973
    605236 7azs:L25A (3.1) BS02 rna ? GO:0003723 ... Q5SHZ1 36827973
    605237 7azs:L25B (3.1) BS01 rna ? GO:0003723 ... Q5SHZ1 36827973
    605238 7azs:L27A (3.1) BS01 rna ? GO:0003735 ... P60493 36827973
    605239 7azs:L27A (3.1) BS02 rna ? GO:0003735 ... P60493 36827973
    605240 7azs:L27A (3.1) BS03 rna ? GO:0003735 ... P60493 36827973
    605241 7azs:L27B (3.1) BS01 rna ? GO:0003735 ... P60493 36827973
    605242 7azs:L27B (3.1) BS02 rna ? GO:0003735 ... P60493 36827973
    605243 7azs:L27B (3.1) BS03 rna ? GO:0003735 ... P60493 36827973
    605244 7azs:L28A (3.1) BS01 rna ? GO:0003735 ... P60494 36827973
    605245 7azs:L28B (3.1) BS01 rna ? GO:0003735 ... P60494 36827973
    605246 7azs:L29A (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 36827973
    605247 7azs:L29B (3.1) BS01 rna ? GO:0003735 ... Q5SHP6 36827973
    605248 7azs:L2A (3.1) BS01 rna ? GO:0002181 ... P60405 36827973
    605249 7azs:L2A (3.1) BS02 rna ? GO:0002181 ... P60405 36827973
    605250 7azs:L2B (3.1) BS01 rna ? GO:0002181 ... P60405 36827973
    605251 7azs:L2B (3.1) BS02 rna ? GO:0002181 ... P60405 36827973
    605252 7azs:L30A (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 36827973
    605253 7azs:L30A (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 36827973
    605254 7azs:L30A (3.1) BS03 MG ? GO:0003735 ... Q5SHQ6 36827973
    605255 7azs:L30B (3.1) BS01 rna ? GO:0003735 ... Q5SHQ6 36827973
    605256 7azs:L30B (3.1) BS02 rna ? GO:0003735 ... Q5SHQ6 36827973
    605257 7azs:L31A (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 36827973
    605258 7azs:L31B (3.1) BS01 rna ? GO:0003735 ... Q5SJE1 36827973
    605259 7azs:L31B (3.1) BS02 rna ? GO:0003735 ... Q5SJE1 36827973
    605260 7azs:L32A (3.1) BS01 rna ? GO:0003735 ... P80339 36827973
    605261 7azs:L32B (3.1) BS01 rna ? GO:0003735 ... P80339 36827973
    605262 7azs:L33A (3.1) BS01 rna ? GO:0000049 ... P35871 36827973
    605263 7azs:L33B (3.1) BS01 rna ? GO:0000049 ... P35871 36827973
    605264 7azs:L33B (3.1) BS02 OHX ? GO:0000049 ... P35871 36827973
    605265 7azs:L34A (3.1) BS01 rna ? GO:0003735 ... P80340 36827973
    605266 7azs:L34B (3.1) BS01 rna ? GO:0003735 ... P80340 36827973
    605267 7azs:L35A (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 36827973
    605268 7azs:L35A (3.1) BS02 OHX ? GO:0003735 ... Q5SKU1 36827973
    605269 7azs:L35B (3.1) BS01 rna ? GO:0003735 ... Q5SKU1 36827973
    605270 7azs:L35B (3.1) BS02 OHX ? GO:0003735 ... Q5SKU1 36827973
    605271 7azs:L3A (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 36827973
    605272 7azs:L3B (3.1) BS01 rna ? GO:0003735 ... Q5SHN8 36827973
    605273 7azs:L4A (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 36827973
    605274 7azs:L4A (3.1) BS02 OHX ? GO:0003735 ... Q5SHN9 36827973
    605275 7azs:L4B (3.1) BS01 rna ? GO:0003735 ... Q5SHN9 36827973
    605276 7azs:L4B (3.1) BS02 OHX ? GO:0003735 ... Q5SHN9 36827973
    605277 7azs:L5A (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 36827973
    605278 7azs:L5A (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 36827973
    605279 7azs:L5A (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 36827973
    605280 7azs:L5A (3.1) BS04 MG ? GO:0000049 ... Q5SHQ0 36827973
    605281 7azs:L5B (3.1) BS01 rna ? GO:0000049 ... Q5SHQ0 36827973
    605282 7azs:L5B (3.1) BS02 rna ? GO:0000049 ... Q5SHQ0 36827973
    605283 7azs:L5B (3.1) BS03 rna ? GO:0000049 ... Q5SHQ0 36827973
    605284 7azs:L6A (3.1) BS01 rna ? GO:0002181 ... P0DOY8 36827973
    605285 7azs:L6B (3.1) BS01 rna ? GO:0002181 ... P0DOY8 36827973
    605286 7azs:L9A (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 36827973
    605287 7azs:L9B (3.1) BS01 rna ? GO:0003735 ... Q5SLQ1 36827973
    605288 7azs:L9B (3.1) BS02 rna ? GO:0003735 ... Q5SLQ1 36827973
    605289 7azs:S10A (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 36827973
    605290 7azs:S10B (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 36827973
    605291 7azs:S11A (3.1) BS01 rna ? GO:0003735 ... P80376 36827973
    605292 7azs:S11B (3.1) BS01 rna ? GO:0003735 ... P80376 36827973
    605293 7azs:S12A (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 36827973
    605294 7azs:S12B (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 36827973
    605295 7azs:S13A (3.1) BS01 rna ? GO:0000049 ... P80377 36827973
    605296 7azs:S13A (3.1) BS02 rna ? GO:0000049 ... P80377 36827973
    605297 7azs:S13B (3.1) BS01 rna ? GO:0000049 ... P80377 36827973
    605298 7azs:S13B (3.1) BS02 rna ? GO:0000049 ... P80377 36827973
    605299 7azs:S14A (3.1) BS01 rna ? GO:0003735 ... P0DOY6 36827973
    605300 7azs:S14B (3.1) BS01 rna ? GO:0003735 ... P0DOY6 36827973
    605301 7azs:S15A (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 36827973
    605302 7azs:S15A (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 36827973
    605303 7azs:S15B (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 36827973
    605304 7azs:S15B (3.1) BS02 rna ? GO:0003735 ... Q5SJ76 36827973
    605305 7azs:S16A (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 36827973
    605306 7azs:S16B (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 36827973
    605307 7azs:S17A (3.1) BS01 rna ? GO:0003735 ... P0DOY7 36827973
    605308 7azs:S17B (3.1) BS01 rna ? GO:0003735 ... P0DOY7 36827973
    605309 7azs:S18A (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 36827973
    605310 7azs:S18B (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 36827973
    605311 7azs:S19A (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 36827973
    605312 7azs:S19B (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 36827973
    605313 7azs:S20A (3.1) BS01 rna ? GO:0003723 ... P80380 36827973
    605314 7azs:S20A (3.1) BS02 OHX ? GO:0003723 ... P80380 36827973
    605315 7azs:S20B (3.1) BS01 rna ? GO:0003723 ... P80380 36827973
    605316 7azs:S2A (3.1) BS01 rna ? GO:0003735 ... P80371 36827973
    605317 7azs:S2B (3.1) BS01 rna ? GO:0003735 ... P80371 36827973
    605318 7azs:S3A (3.1) BS01 rna ? GO:0003676 ... P80372 36827973
    605319 7azs:S3A (3.1) BS02 rna ? GO:0003676 ... P80372 36827973
    605320 7azs:S3B (3.1) BS01 rna ? GO:0003676 ... P80372 36827973
    605321 7azs:S3B (3.1) BS02 rna ? GO:0003676 ... P80372 36827973
    605322 7azs:S4A (3.1) BS01 rna ? GO:0003723 ... P80373 36827973
    605323 7azs:S4B (3.1) BS01 rna ? GO:0003723 ... P80373 36827973
    605324 7azs:S5A (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 36827973
    605325 7azs:S5A (3.1) BS02 rna ? GO:0003723 ... Q5SHQ5 36827973
    605326 7azs:S5B (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 36827973
    605327 7azs:S5B (3.1) BS02 rna ? GO:0003723 ... Q5SHQ5 36827973
    605328 7azs:S6A (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 36827973
    605329 7azs:S6B (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 36827973
    605330 7azs:S7A (3.1) BS01 rna ? GO:0000049 ... P17291 36827973
    605331 7azs:S7A (3.1) BS02 rna ? GO:0000049 ... P17291 36827973
    605332 7azs:S7B (3.1) BS01 rna ? GO:0000049 ... P17291 36827973
    605333 7azs:S7B (3.1) BS02 rna ? GO:0000049 ... P17291 36827973
    605334 7azs:S8A (3.1) BS01 rna ? GO:0003735 ... P0DOY9 36827973
    605335 7azs:S8B (3.1) BS01 rna ? GO:0003735 ... P0DOY9 36827973
    605336 7azs:S9A (3.1) BS01 rna ? GO:0000049 ... P80374 36827973
    605337 7azs:S9A (3.1) BS02 rna ? GO:0000049 ... P80374 36827973
    605338 7azs:S9B (3.1) BS01 rna ? GO:0000049 ... P80374 36827973
    605339 7azt:A (2.27) BS01 FAD ? GO:0000166 ... Q8SXK5 34342273
    605340 7azu:A (1.801) BS01 0RE ? GO:0016740 ... A0A090KS30 33937777
    605341 7azv:A (1.68) BS01 FBF ? GO:0005515 ... P0A2U4 N/A
    605342 7azx:A (2.25) BS01 peptide ? N/A Q13105 34186024
    605343 7azx:B (2.25) BS01 peptide ? N/A Q13105 34186024
    605344 7azy:A (2.877) BS01 rna ? GO:0000027 ... Q02326 33990576
    605345 7azy:B (2.877) BS01 rna ? GO:0002181 ... P87262 33990576
    605346 7azy:C (2.877) BS01 rna ? GO:0000463 ... P05737 33990576
    605347 7azy:C (2.877) BS02 rna ? GO:0000463 ... P05737 33990576
    605348 7azy:D (2.877) BS01 rna ? GO:0000463 ... P0CX84 33990576
    605349 7azy:D (2.877) BS02 rna ? GO:0000463 ... P0CX84 33990576
    605350 7azy:H (2.877) BS01 rna ? GO:0002181 ... P0CX82 33990576
    605351 7azy:I (2.877) BS01 rna ? GO:0000027 ... P04456 33990576
    605352 7azy:I (2.877) BS02 rna ? GO:0000027 ... P04456 33990576
    605353 7azy:M (2.877) BS01 rna ? GO:0002181 ... P04650 33990576
    605354 7azy:M (2.877) BS02 rna ? GO:0002181 ... P04650 33990576
    605355 7azy:N (2.877) BS01 rna ? GO:0000027 ... P36105 33990576
    605356 7azy:O (2.877) BS01 rna ? GO:0002181 ... P0C2H6 33990576
    605357 7azy:P (2.877) BS01 rna ? GO:0000027 ... P0CH08 33990576
    605358 7azy:Q (2.877) BS01 rna ? GO:0002181 ... P0CX27 33990576
    605359 7azy:R (2.877) BS01 rna ? GO:0002181 ... P05748 33990576
    605360 7azy:R (2.877) BS02 rna ? GO:0002181 ... P05748 33990576
    605361 7azy:S (2.877) BS01 rna ? GO:0002181 ... P02406 33990576
    605362 7azy:U (2.877) BS01 rna ? GO:0002181 ... P0CX25 33990576
    605363 7azy:V (2.877) BS01 rna ? GO:0000470 ... P26784 33990576
    605364 7azy:W (2.877) BS01 rna ? GO:0002181 ... P05747 33990576
    605365 7azy:b (2.877) BS01 rna ? GO:0000470 ... P17076 33990576
    605366 7azy:b (2.877) BS02 rna ? GO:0000470 ... P17076 33990576
    605367 7azy:c (2.877) BS01 rna ? GO:0002181 ... P0CX41 33990576
    605368 7azy:d (2.877) BS01 rna ? GO:0002181 ... P05745 33990576
    605369 7azy:e (2.877) BS01 rna ? GO:0002181 ... P05738 33990576
    605370 7azy:f (2.877) BS01 rna ? GO:0002181 ... P04449 33990576
    605371 7azy:g (2.877) BS01 rna ? GO:0000448 ... P49166 33990576
    605372 7azy:g (2.877) BS02 rna ? GO:0000448 ... P49166 33990576
    605373 7azy:h (2.877) BS01 rna ? GO:0000027 ... Q3E757 33990576
    605374 7azy:h (2.877) BS02 rna ? GO:0000027 ... Q3E757 33990576
    605375 7azy:j (2.877) BS01 rna ? GO:0002181 ... P49167 33990576
    605376 7azy:k (2.877) BS01 rna ? GO:0002181 ... Q12690 33990576
    605377 7azy:k (2.877) BS02 rna ? GO:0002181 ... Q12690 33990576
    605378 7azy:l (2.877) BS01 rna ? GO:0000027 ... P14126 33990576
    605379 7azy:m (2.877) BS01 rna ? GO:0002181 ... P0CX49 33990576
    605380 7azy:n (2.877) BS01 rna ? GO:0002181 ... P0C2H8 33990576
    605381 7azy:o (2.877) BS01 rna ? GO:0000027 ... P41805 33990576
    605382 7azy:o (2.877) BS02 rna ? GO:0000027 ... P41805 33990576
    605383 7azy:p (2.877) BS01 rna ? GO:0002181 ... P10664 33990576
    605384 7azy:p (2.877) BS02 rna ? GO:0002181 ... P10664 33990576
    605385 7azy:q (2.877) BS01 rna ? GO:0002181 ... P05743 33990576
    605386 7azy:q (2.877) BS02 rna ? GO:0002181 ... P05743 33990576
    605387 7azy:r (2.877) BS01 rna ? GO:0002181 ... P38061 33990576
    605388 7azy:s (2.877) BS01 rna ? GO:0002181 ... P0CX23 33990576
    605389 7azy:s (2.877) BS02 rna ? GO:0002181 ... P0CX23 33990576
    605390 7azy:t (2.877) BS01 rna ? GO:0000027 ... P26321 33990576
    605391 7azy:t (2.877) BS02 rna ? GO:0000027 ... P26321 33990576
    605392 7azy:u (2.877) BS01 rna ? GO:0002181 ... Q02753 33990576
    605393 7azy:u (2.877) BS02 rna ? GO:0002181 ... Q02753 33990576
    605394 7azy:v (2.877) BS01 rna ? GO:0000027 ... P05744 33990576
    605395 7azy:w (2.877) BS01 rna ? GO:0002181 ... P05749 33990576
    605396 7azy:x (2.877) BS01 rna ? GO:0002181 ... P0CX45 33990576
    605397 7azy:y (2.877) BS01 rna ? GO:0000448 ... P05740 33990576
    605398 7azy:y (2.877) BS02 rna ? GO:0000448 ... P05740 33990576
    605399 7b00:A (3.98) BS01 AJP ? GO:0003333 ... Q9UHI5 34848541
    605400 7b01:A (2.8) BS01 GLC 3.4.24.87 GO:0005515 ... P0AEX9
    Q76LX8
    33863735

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).