SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    606001 7b3m:B (2.3) BS03 SU5 2.7.12.2 GO:0004672 ... Q02750 33603979
    606002 7b3n:A (1.793) BS01 ZN ? GO:0008745 ... H7GE39 36721347
    606003 7b3n:B (1.793) BS01 ZN ? GO:0008745 ... H7GE39 36721347
    606004 7b3n:C (1.793) BS01 ZN ? GO:0008745 ... H7GE39 36721347
    606005 7b3n:D (1.793) BS01 ZN ? GO:0008745 ... H7GE39 36721347
    606006 7b3n:E (1.793) BS01 ZN ? GO:0008745 ... H7GE39 36721347
    606007 7b3p:A (1.28) BS01 SUQ 3.1.1.98 GO:0016787 ... Q6P988 34939789
    606008 7b3q:A (1.75) BS01 SV5 2.7.10.1 GO:0004672 ... P08581 33488978
    606009 7b3t:A (2.23) BS01 SVK 2.7.10.1 GO:0004672 ... P08581 33488978
    606010 7b3v:A (1.93) BS01 SWB 2.7.10.1 GO:0004672 ... P08581 33488978
    606011 7b3w:A (2.02) BS01 SVH 2.7.10.1 GO:0004672 ... P08581 33488978
    606012 7b3x:A (1.34) BS01 SUT 3.1.1.98 GO:0016787 ... Q6P988 34939789
    606013 7b3z:A (1.8) BS01 SV8 2.7.10.1 GO:0004672 ... P08581 33488978
    606014 7b40:A (1.76) BS01 SWN 2.7.10.1 GO:0004672 ... P08581 33488978
    606015 7b41:A (1.97) BS01 SWK 2.7.10.1 GO:0004672 ... P08581 33488978
    606016 7b42:A (1.8) BS01 SW8 2.7.10.1 GO:0004672 ... P08581 33488978
    606017 7b43:A (1.87) BS01 SW5 2.7.10.1 GO:0004672 ... P08581 33488978
    606018 7b43:B (1.87) BS01 SW5 2.7.10.1 GO:0004672 ... P08581 33488978
    606019 7b44:A (1.76) BS01 SVT 2.7.10.1 GO:0004672 ... P08581 33488978
    606020 7b45:A (1.38) BS01 SWQ 3.1.1.98 GO:0016787 ... Q6P988 34939789
    606021 7b46:A (2.02) BS01 dna ? GO:0000976 ... P04637 34862374
    606022 7b46:A (2.02) BS02 ZN ? GO:0000976 ... P04637 34862374
    606023 7b46:A (2.02) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606024 7b46:A (2.02) BS04 QN8 ? GO:0000976 ... P04637 34862374
    606025 7b46:A (2.02) BS05 QN8 ? GO:0000976 ... P04637 34862374
    606026 7b46:B (2.02) BS01 dna ? GO:0000976 ... P04637 34862374
    606027 7b46:B (2.02) BS02 ZN ? GO:0000976 ... P04637 34862374
    606028 7b46:B (2.02) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606029 7b46:C (2.02) BS01 dna ? GO:0000976 ... P04637 34862374
    606030 7b46:C (2.02) BS02 dna ? GO:0000976 ... P04637 34862374
    606031 7b46:C (2.02) BS03 dna ? GO:0000976 ... P04637 34862374
    606032 7b46:C (2.02) BS04 ZN ? GO:0000976 ... P04637 34862374
    606033 7b46:C (2.02) BS05 QN8 ? GO:0000976 ... P04637 34862374
    606034 7b46:C (2.02) BS06 QN8 ? GO:0000976 ... P04637 34862374
    606035 7b46:D (2.02) BS01 dna ? GO:0000976 ... P04637 34862374
    606036 7b46:D (2.02) BS02 ZN ? GO:0000976 ... P04637 34862374
    606037 7b46:D (2.02) BS03 QNN ? GO:0000976 ... P04637 34862374
    606038 7b47:A (1.8) BS01 ZN ? GO:0000976 ... P04637 34862374
    606039 7b47:A (1.8) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606040 7b47:A (1.8) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606041 7b47:B (1.8) BS01 ZN ? GO:0000976 ... P04637 34862374
    606042 7b47:B (1.8) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606043 7b47:B (1.8) BS03 QNN ? GO:0000976 ... P04637 34862374
    606044 7b47:C (1.8) BS01 ZN ? GO:0000976 ... P04637 34862374
    606045 7b47:C (1.8) BS02 QNN ? GO:0000976 ... P04637 34862374
    606046 7b47:D (1.8) BS01 ZN ? GO:0000976 ... P04637 34862374
    606047 7b47:D (1.8) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606048 7b47:D (1.8) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606049 7b47:D (1.8) BS04 QNN ? GO:0000976 ... P04637 34862374
    606050 7b47:D (1.8) BS05 QN8 ? GO:0000976 ... P04637 34862374
    606051 7b48:A (2.05) BS01 ZN ? GO:0000976 ... P04637 34862374
    606052 7b48:B (2.05) BS01 ZN ? GO:0000976 ... P04637 34862374
    606053 7b48:C (2.05) BS01 ZN ? GO:0000976 ... P04637 34862374
    606054 7b48:C (2.05) BS02 QNN ? GO:0000976 ... P04637 34862374
    606055 7b48:D (2.05) BS01 ZN ? GO:0000976 ... P04637 34862374
    606056 7b49:A (1.42) BS01 ZN ? GO:0000976 ... P04637 34862374
    606057 7b49:A (1.42) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606058 7b49:A (1.42) BS03 QNN ? GO:0000976 ... P04637 34862374
    606059 7b49:B (1.42) BS01 ZN ? GO:0000976 ... P04637 34862374
    606060 7b49:B (1.42) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606061 7b49:B (1.42) BS03 QNN ? GO:0000976 ... P04637 34862374
    606062 7b4a:A (1.9) BS01 dna ? GO:0000976 ... P04637 34862374
    606063 7b4a:A (1.9) BS02 ZN ? GO:0000976 ... P04637 34862374
    606064 7b4a:B (1.9) BS01 dna ? GO:0000976 ... P04637 34862374
    606065 7b4a:B (1.9) BS02 ZN ? GO:0000976 ... P04637 34862374
    606066 7b4b:A (1.76) BS01 ZN ? GO:0000976 ... P04637 34862374
    606067 7b4b:A (1.76) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606068 7b4b:A (1.76) BS03 QNN ? GO:0000976 ... P04637 34862374
    606069 7b4b:B (1.76) BS01 ZN ? GO:0000976 ... P04637 34862374
    606070 7b4b:B (1.76) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606071 7b4b:B (1.76) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606072 7b4b:C (1.76) BS01 ZN ? GO:0000976 ... P04637 34862374
    606073 7b4b:C (1.76) BS02 QNN ? GO:0000976 ... P04637 34862374
    606074 7b4b:C (1.76) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606075 7b4b:D (1.76) BS01 ZN ? GO:0000976 ... P04637 34862374
    606076 7b4b:D (1.76) BS02 QNN ? GO:0000976 ... P04637 34862374
    606077 7b4c:A (1.71) BS01 ZN ? GO:0000976 ... P04637 34862374
    606078 7b4c:A (1.71) BS02 QNN ? GO:0000976 ... P04637 34862374
    606079 7b4c:B (1.71) BS01 ZN ? GO:0000976 ... P04637 34862374
    606080 7b4c:B (1.71) BS02 QNN ? GO:0000976 ... P04637 34862374
    606081 7b4c:B (1.71) BS03 QNN ? GO:0000976 ... P04637 34862374
    606082 7b4c:C (1.71) BS01 ZN ? GO:0000976 ... P04637 34862374
    606083 7b4c:C (1.71) BS02 QNN ? GO:0000976 ... P04637 34862374
    606084 7b4c:D (1.71) BS01 ZN ? GO:0000976 ... P04637 34862374
    606085 7b4c:D (1.71) BS02 QNN ? GO:0000976 ... P04637 34862374
    606086 7b4d:A (1.85) BS01 dna ? GO:0000976 ... P04637 34862374
    606087 7b4d:A (1.85) BS02 ZN ? GO:0000976 ... P04637 34862374
    606088 7b4d:A (1.85) BS03 QNN ? GO:0000976 ... P04637 34862374
    606089 7b4d:A (1.85) BS04 QN8 ? GO:0000976 ... P04637 34862374
    606090 7b4d:A (1.85) BS05 QNN ? GO:0000976 ... P04637 34862374
    606091 7b4d:A (1.85) BS06 QNN ? GO:0000976 ... P04637 34862374
    606092 7b4e:A (1.58) BS01 ZN ? GO:0000976 ... P04637 34862374
    606093 7b4e:A (1.58) BS02 QN8 ? GO:0000976 ... P04637 34862374
    606094 7b4e:A (1.58) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606095 7b4e:A (1.58) BS04 QN8 ? GO:0000976 ... P04637 34862374
    606096 7b4f:A (1.78) BS01 dna ? GO:0000976 ... P04637 34862374
    606097 7b4f:A (1.78) BS02 ZN ? GO:0000976 ... P04637 34862374
    606098 7b4g:A (1.86) BS01 dna ? GO:0000976 ... P04637 34862374
    606099 7b4g:A (1.86) BS02 ZN ? GO:0000976 ... P04637 34862374
    606100 7b4h:A (1.39) BS01 dna ? GO:0000976 ... P04637 34862374
    606101 7b4h:A (1.39) BS02 ZN ? GO:0000976 ... P04637 34862374
    606102 7b4h:A (1.39) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606103 7b4h:A (1.39) BS04 QN8 ? GO:0000976 ... P04637 34862374
    606104 7b4h:A (1.39) BS05 QNN ? GO:0000976 ... P04637 34862374
    606105 7b4i:AAA (1.7) BS01 PLP N/A GO:0008483 ... N/A 34504735
    606106 7b4i:AAA (1.7) BS02 PLP N/A GO:0008483 ... N/A 34504735
    606107 7b4i:BBB (1.7) BS01 PLP N/A GO:0008483 ... N/A 34504735
    606108 7b4i:BBB (1.7) BS02 PLP N/A GO:0008483 ... N/A 34504735
    606109 7b4j:A (1.9) BS01 PMP ? GO:0004015 ... A0A2W0F5X5 34504735
    606110 7b4j:A (1.9) BS02 PMP ? GO:0004015 ... A0A2W0F5X5 34504735
    606111 7b4j:B (1.9) BS01 PMP ? GO:0004015 ... A0A2W0F5X5 34504735
    606112 7b4j:B (1.9) BS02 PMP ? GO:0004015 ... A0A2W0F5X5 34504735
    606113 7b4n:A (1.32) BS01 dna ? GO:0000976 ... P04637 34862374
    606114 7b4n:A (1.32) BS02 ZN ? GO:0000976 ... P04637 34862374
    606115 7b4n:A (1.32) BS03 QN8 ? GO:0000976 ... P04637 34862374
    606116 7b4n:A (1.32) BS04 QN8 ? GO:0000976 ... P04637 34862374
    606117 7b4n:A (1.32) BS05 QNN ? GO:0000976 ... P04637 34862374
    606118 7b4o:AAA (1.41) BS01 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606119 7b4o:AAA (1.41) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606120 7b4o:AAA (1.41) BS03 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606121 7b4o:BBB (1.41) BS01 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606122 7b4o:BBB (1.41) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606123 7b4o:BBB (1.41) BS03 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606124 7b4o:CCC (1.41) BS01 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606125 7b4o:CCC (1.41) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606126 7b4o:CCC (1.41) BS03 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606127 7b4o:DDD (1.41) BS01 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606128 7b4o:DDD (1.41) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606129 7b4p:AAA (2.7) BS01 CU 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606130 7b4p:AAA (2.7) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606131 7b4p:BBB (2.7) BS01 CU 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606132 7b4p:BBB (2.7) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606133 7b4p:CCC (2.7) BS01 CU 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606134 7b4p:CCC (2.7) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606135 7b4p:DDD (2.7) BS01 CU 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606136 7b4p:DDD (2.7) BS02 ZN 1.15.1.1 GO:0005507 ... A0A1F3DVA5 34021750
    606137 7b4r:A (1.4) BS01 FD7 ? GO:0000287 ... B1MD73 34508141
    606138 7b4r:A (1.4) BS02 COA ? GO:0000287 ... B1MD73 34508141
    606139 7b4s:A (1.38) BS01 P62 ? GO:0000287 ... B1MD73 34508141
    606140 7b4s:A (1.38) BS02 COA ? GO:0000287 ... B1MD73 34508141
    606141 7b4s:A (1.38) BS03 MN ? GO:0000287 ... B1MD73 34508141
    606142 7b4t:A (1.95) BS01 peptide N/A N/A N/A 34795280
    606143 7b4u:A (1.45) BS01 peptide N/A N/A N/A 34795280
    606144 7b4u:A (1.45) BS02 peptide N/A N/A N/A 34795280
    606145 7b4u:C (1.45) BS01 peptide N/A N/A N/A 34795280
    606146 7b4u:C (1.45) BS02 peptide N/A N/A N/A 34795280
    606147 7b4v:A (1.4) BS01 peptide N/A N/A N/A 34795280
    606148 7b4v:C (1.4) BS01 peptide N/A N/A N/A 34795280
    606149 7b4v:C (1.4) BS02 peptide N/A N/A N/A 34795280
    606150 7b4v:C (1.4) BS03 MG N/A N/A N/A 34795280
    606151 7b4w:A (1.9) BS01 peptide N/A N/A N/A 34795280
    606152 7b4w:A (1.9) BS02 CA N/A N/A N/A 34795280
    606153 7b4w:A (1.9) BS03 CA N/A N/A N/A 34795280
    606154 7b4w:C (1.9) BS01 peptide N/A N/A N/A 34795280
    606155 7b4x:A (1.24) BS01 SWT 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606156 7b4y:A (2.19) BS01 CU ? GO:0005507 ... Q9XAL8 35224382
    606157 7b4y:A (2.19) BS02 CU ? GO:0005507 ... Q9XAL8 35224382
    606158 7b4y:B (2.19) BS01 CU ? GO:0005507 ... Q9XAL8 35224382
    606159 7b4y:B (2.19) BS02 CU ? GO:0005507 ... Q9XAL8 35224382
    606160 7b4y:B (2.19) BS03 CU ? GO:0005507 ... Q9XAL8 35224382
    606161 7b50:A (1.33) BS01 SXQ 3.1.1.98 GO:0016787 ... Q6P988 34939789
    606162 7b51:B (2.58) BS01 GTP 3.6.5.- GO:0003924 ... P62826 33682791
    606163 7b51:B (2.58) BS02 MG 3.6.5.- GO:0003924 ... P62826 33682791
    606164 7b56:A (1.45) BS01 ANP ? N/A P35609 N/A
    606165 7b56:B (1.45) BS01 ANP 2.7.11.17 GO:0004672 ... P11798 N/A
    606166 7b57:B (1.95) BS01 ADP 2.7.11.17 GO:0004672 ... P11798 N/A
    606167 7b58:CCC (1.72) BS01 O 3.5.1.5 GO:0005737 ... P41020 33711632
    606168 7b59:CCC (1.63) BS01 O 3.5.1.5 GO:0005737 ... P41020 33711632
    606169 7b5a:CCC (1.97) BS01 O 3.5.1.5 GO:0005737 ... P41020 33711632
    606170 7b5c:A (3.7) BS01 CA ? GO:0005229 ... Q8BHY3 33542223
    606171 7b5c:A (3.7) BS02 CA ? GO:0005229 ... Q8BHY3 33542223
    606172 7b5c:B (3.7) BS01 CA ? GO:0005229 ... Q8BHY3 33542223
    606173 7b5c:B (3.7) BS02 CA ? GO:0005229 ... Q8BHY3 33542223
    606174 7b5e:A (4.1) BS01 CA ? GO:0005229 ... Q8BHY3 33542223
    606175 7b5e:A (4.1) BS02 CA ? GO:0005229 ... Q8BHY3 33542223
    606176 7b5e:B (4.1) BS01 CA ? GO:0005229 ... Q8BHY3 33542223
    606177 7b5e:B (4.1) BS02 CA ? GO:0005229 ... Q8BHY3 33542223
    606178 7b5f:G (2.9) BS01 peptide ? N/A P55899 N/A
    606179 7b5k:0 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 N/A
    606180 7b5k:1 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 N/A
    606181 7b5k:2 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    606182 7b5k:3 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 N/A
    606183 7b5k:4 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 N/A
    606184 7b5k:5 (2.9) BS01 rna ? GO:0002181 ... P0A7M9 N/A
    606185 7b5k:C (2.9) BS01 rna ? GO:0000027 ... P60422 N/A
    606186 7b5k:C (2.9) BS02 rna ? GO:0000027 ... P60422 N/A
    606187 7b5k:C (2.9) BS03 MG ? GO:0000027 ... P60422 N/A
    606188 7b5k:C (2.9) BS04 MG ? GO:0000027 ... P60422 N/A
    606189 7b5k:D (2.9) BS01 rna ? GO:0000027 ... P60438 N/A
    606190 7b5k:E (2.9) BS01 rna ? GO:0001070 ... P60723 N/A
    606191 7b5k:E (2.9) BS02 MG ? GO:0001070 ... P60723 N/A
    606192 7b5k:F (2.9) BS01 rna ? GO:0000027 ... P62399 N/A
    606193 7b5k:F (2.9) BS02 rna ? GO:0000027 ... P62399 N/A
    606194 7b5k:F (2.9) BS03 rna ? GO:0000027 ... P62399 N/A
    606195 7b5k:G (2.9) BS01 rna ? GO:0000027 ... P0AG55 N/A
    606196 7b5k:H (2.9) BS01 rna ? GO:0002181 ... P0A7R1 N/A
    606197 7b5k:J (2.9) BS01 rna ? GO:0002181 ... P0AA10 N/A
    606198 7b5k:K (2.9) BS01 rna ? GO:0002181 ... P0ADY3 N/A
    606199 7b5k:K (2.9) BS02 rna ? GO:0002181 ... P0ADY3 N/A
    606200 7b5k:L (2.9) BS01 rna ? GO:0002181 ... P02413 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).