SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    606801 7ba9:A (1.48) BS02 T6N ? GO:0000122 ... P31947 34136078
    606802 7baa:A (1.1) BS01 peptide ? GO:0000122 ... P31947 34136078
    606803 7baa:A (1.1) BS02 T5Z ? GO:0000122 ... P31947 34136078
    606804 7bab:A (1.3) BS01 peptide ? GO:0000122 ... P31947 34136078
    606805 7bab:A (1.3) BS02 T6W ? GO:0000122 ... P31947 34136078
    606806 7bac:A (1.54) BS01 LO5 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606807 7bac:A (1.54) BS02 LO5 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606808 7bad:A (1.69) BS01 EVB ? GO:0050832 ... B6GXZ8 33631304
    606809 7bag:A (2.0) BS01 peptide ? GO:0004866 ... P01024 36127336
    606810 7bag:A (2.0) BS02 CA ? GO:0004866 ... P01024 36127336
    606811 7bah:A (1.89) BS01 rna 3.6.4.13 N/A O95786 N/A
    606812 7bah:A (1.89) BS02 rna 3.6.4.13 N/A O95786 N/A
    606813 7bah:A (1.89) BS03 ZN 3.6.4.13 N/A O95786 N/A
    606814 7bah:B (1.89) BS01 rna 3.6.4.13 N/A O95786 N/A
    606815 7bah:B (1.89) BS02 rna 3.6.4.13 N/A O95786 N/A
    606816 7bah:B (1.89) BS03 ZN 3.6.4.13 N/A O95786 N/A
    606817 7bai:A (3.4) BS01 rna 3.6.4.13 N/A O95786 N/A
    606818 7bai:A (3.4) BS02 rna 3.6.4.13 N/A O95786 N/A
    606819 7bai:A (3.4) BS03 ZN 3.6.4.13 N/A O95786 N/A
    606820 7bai:B (3.4) BS01 rna 3.6.4.13 N/A O95786 N/A
    606821 7bai:B (3.4) BS02 rna 3.6.4.13 N/A O95786 N/A
    606822 7bai:B (3.4) BS03 ZN 3.6.4.13 N/A O95786 N/A
    606823 7bai:E (3.4) BS01 rna 3.6.4.13 N/A O95786 N/A
    606824 7bai:E (3.4) BS02 ZN 3.6.4.13 N/A O95786 N/A
    606825 7bak:A (2.05) BS01 SE 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 34031399
    606826 7bal:A (1.85) BS01 SE 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 34031399
    606827 7bam:A (3.5) BS01 CA ? N/A Q6N022 35099835
    606828 7bam:A (3.5) BS02 CA ? N/A Q6N022 35099835
    606829 7bam:A (3.5) BS03 CA ? N/A Q6N022 35099835
    606830 7bam:B (3.5) BS01 CA ? N/A Q6N022 35099835
    606831 7bam:B (3.5) BS02 CA ? N/A Q6N022 35099835
    606832 7bam:B (3.5) BS03 CA ? N/A Q6N022 35099835
    606833 7ban:A (2.7) BS01 CA ? N/A Q6N022 35099835
    606834 7ban:A (2.7) BS02 CA ? N/A Q6N022 35099835
    606835 7ban:A (2.7) BS03 CA ? N/A Q6N022 35099835
    606836 7ban:B (2.7) BS01 CA ? N/A Q6N022 35099835
    606837 7ban:B (2.7) BS02 CA ? N/A Q6N022 35099835
    606838 7ban:B (2.7) BS03 CA ? N/A Q6N022 35099835
    606839 7bao:A (2.7) BS01 CA ? N/A Q6N022 35099835
    606840 7bao:A (2.7) BS02 CA ? N/A Q6N022 35099835
    606841 7bao:A (2.7) BS03 CA ? N/A Q6N022 35099835
    606842 7bap:A (1.53) BS01 S4V 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606843 7bap:A (1.53) BS02 S4V 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606844 7baq:A (1.54) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    606845 7baq:A (1.54) BS02 T82 2.7.11.11 GO:0000287 ... P25321 N/A
    606846 7bar:A (1.37) BS01 T82 2.7.11.11 GO:0000287 ... P25321 N/A
    606847 7bas:A (1.1) BS01 peptide N/A N/A N/A 34745518
    606848 7bas:B (1.1) BS01 peptide N/A N/A N/A 34745518
    606849 7bat:B (1.77) BS01 peptide N/A N/A N/A 34745518
    606850 7bau:D (1.42) BS01 peptide N/A N/A N/A 34745518
    606851 7bau:E (1.42) BS01 peptide N/A N/A N/A 34745518
    606852 7bau:G (1.42) BS01 peptide N/A N/A N/A 34745518
    606853 7bau:G (1.42) BS02 peptide N/A N/A N/A 34745518
    606854 7bau:I (1.42) BS01 peptide N/A N/A N/A 34745518
    606855 7bau:J (1.42) BS01 peptide N/A N/A N/A 34745518
    606856 7bau:J (1.42) BS02 peptide N/A N/A N/A 34745518
    606857 7baw:D (1.71) BS01 peptide N/A N/A N/A 34745518
    606858 7baw:F (1.71) BS01 peptide N/A N/A N/A 34745518
    606859 7bay:AA (2.65) BS01 T7K ? N/A Q8DR52 N/A
    606860 7bb0:A (1.75) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 N/A
    606861 7bb0:A (1.75) BS02 T7W 2.7.11.11 GO:0000287 ... P25321 N/A
    606862 7bb4:A (1.7) BS01 FUL ? GO:0046872 ... Q7N8J0 33765407
    606863 7bb4:A (1.7) BS02 FUC ? GO:0046872 ... Q7N8J0 33765407
    606864 7bb4:A (1.7) BS03 FUL ? GO:0046872 ... Q7N8J0 33765407
    606865 7bb4:A (1.7) BS04 FUC ? GO:0046872 ... Q7N8J0 33765407
    606866 7bb4:A (1.7) BS05 FUL ? GO:0046872 ... Q7N8J0 33765407
    606867 7bb4:A (1.7) BS06 FUC ? GO:0046872 ... Q7N8J0 33765407
    606868 7bb4:A (1.7) BS07 FUL ? GO:0046872 ... Q7N8J0 33765407
    606869 7bb6:A (4.2) BS01 peptide ? GO:0001992 ... P30518 34020960
    606870 7bb7:A (4.4) BS01 peptide ? GO:0001992 ... P30518 34020960
    606871 7bb8:A (1.506) BS01 ZN ? GO:0006508 ... A0A292DHH8 N/A
    606872 7bb8:A (1.506) BS02 CA ? GO:0006508 ... A0A292DHH8 N/A
    606873 7bb8:A (1.506) BS03 CA ? GO:0006508 ... A0A292DHH8 N/A
    606874 7bb8:A (1.506) BS04 CA ? GO:0006508 ... A0A292DHH8 N/A
    606875 7bb8:B (1.506) BS01 ZN ? GO:0006508 ... A0A292DHH8 N/A
    606876 7bb8:B (1.506) BS02 CA ? GO:0006508 ... A0A292DHH8 N/A
    606877 7bb8:B (1.506) BS03 CA ? GO:0006508 ... A0A292DHH8 N/A
    606878 7bb8:B (1.506) BS04 CA ? GO:0006508 ... A0A292DHH8 N/A
    606879 7bb9:A (1.97) BS01 CA ? GO:0006508 ... A0A292DHH8 N/A
    606880 7bb9:A (1.97) BS02 CA ? GO:0006508 ... A0A292DHH8 N/A
    606881 7bb9:A (1.97) BS03 CA ? GO:0006508 ... A0A292DHH8 N/A
    606882 7bb9:A (1.97) BS04 ZN ? GO:0006508 ... A0A292DHH8 N/A
    606883 7bbc:A (1.84) BS01 FUL ? GO:0046872 ... Q7N8J0 33765407
    606884 7bbc:A (1.84) BS02 FUC ? GO:0046872 ... Q7N8J0 33765407
    606885 7bbc:A (1.84) BS03 FUL ? GO:0046872 ... Q7N8J0 33765407
    606886 7bbc:A (1.84) BS04 FUC ? GO:0046872 ... Q7N8J0 33765407
    606887 7bbc:A (1.84) BS05 FUL ? GO:0046872 ... Q7N8J0 33765407
    606888 7bbc:A (1.84) BS06 FUC ? GO:0046872 ... Q7N8J0 33765407
    606889 7bbd:B (2.2) BS01 ZN 2.3.2.27 GO:0004842 ... P0CG47
    P19474
    33619271
    606890 7bbd:B (2.2) BS02 ZN 2.3.2.27 GO:0004842 ... P0CG47
    P19474
    33619271
    606891 7bbg:A (2.64) BS01 peptide ? N/A A0A140T913 34280257
    606892 7bbg:H (2.64) BS01 peptide N/A N/A N/A 34280257
    606893 7bbj:A (2.72) BS01 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606894 7bbj:A (2.72) BS02 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606895 7bbj:A (2.72) BS03 MG 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606896 7bbj:B (2.72) BS01 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606897 7bbj:B (2.72) BS02 ZN 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606898 7bbj:B (2.72) BS03 MG 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99
    GO:0000166 ... P21589 34482286
    606899 7bbm:A (1.14) BS01 MNH 5.99.-.- GO:0003674 ... O64527 N/A
    606900 7bbn:A (1.68) BS01 GDP N/A GO:0003746 ... N/A N/A
    606901 7bbn:B (1.68) BS01 GDP N/A GO:0003746 ... N/A N/A
    606902 7bbo:AAA (1.32) BS01 CA ? N/A Q8WWQ0 N/A
    606903 7bbp:AAA (1.99) BS01 peptide ? N/A Q8WWQ0 N/A
    606904 7bbp:BBB (1.99) BS01 peptide ? N/A Q8WWQ0 N/A
    606905 7bbp:CCC (1.99) BS01 peptide ? N/A Q8WWQ0 N/A
    606906 7bbp:DDD (1.99) BS01 peptide ? N/A Q8WWQ0 N/A
    606907 7bbr:A (1.3) BS01 KDG ? GO:0030288 ... R4JTF7 33630388
    606908 7bbt:A (3.023) BS01 HEC ? GO:0005515 ... P00044 34054353
    606909 7bbt:B (3.023) BS01 HEC ? GO:0005515 ... P00044 34054353
    606910 7bbt:C (3.023) BS01 HEC ? GO:0005515 ... P00044 34054353
    606911 7bbt:C (3.023) BS02 T8W ? GO:0005515 ... P00044 34054353
    606912 7bbt:C (3.023) BS03 T8W ? GO:0005515 ... P00044 34054353
    606913 7bbt:C (3.023) BS04 T8W ? GO:0005515 ... P00044 34054353
    606914 7bbt:D (3.023) BS01 T8W ? GO:0005515 ... P00044 34054353
    606915 7bbt:D (3.023) BS02 T8W ? GO:0005515 ... P00044 34054353
    606916 7bbt:D (3.023) BS03 HEC ? GO:0005515 ... P00044 34054353
    606917 7bbt:D (3.023) BS04 T8W ? GO:0005515 ... P00044 34054353
    606918 7bbu:A (2.19) BS01 PRO 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 N/A
    606919 7bbu:A (2.19) BS02 MU5 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 N/A
    606920 7bbu:A (2.19) BS03 ZN 6.1.1.15
    6.1.1.17
    GO:0000166 ... P07814 N/A
    606921 7bbv:A (1.2) BS01 CA ? GO:0000272 ... G2X3Y1 36639075
    606922 7bbv:A (1.2) BS02 MAN ? GO:0000272 ... G2X3Y1 36639075
    606923 7bbv:A (1.2) BS03 MAN ? GO:0000272 ... G2X3Y1 36639075
    606924 7bbv:A (1.2) BS04 MAN ? GO:0000272 ... G2X3Y1 36639075
    606925 7bbv:A (1.2) BS05 MAN ? GO:0000272 ... G2X3Y1 36639075
    606926 7bbv:A (1.2) BS06 MAN ? GO:0000272 ... G2X3Y1 36639075
    606927 7bbv:B (1.2) BS01 CA ? GO:0000272 ... G2X3Y1 36639075
    606928 7bbv:B (1.2) BS02 MAN ? GO:0000272 ... G2X3Y1 36639075
    606929 7bbv:B (1.2) BS03 MAN ? GO:0000272 ... G2X3Y1 36639075
    606930 7bbv:B (1.2) BS04 MAN ? GO:0000272 ... G2X3Y1 36639075
    606931 7bbv:B (1.2) BS05 MAN ? GO:0000272 ... G2X3Y1 36639075
    606932 7bc1:A (1.5) BS01 NAP 1.1.1.432 GO:0005829 ... A9CEY6 35074914
    606933 7bc1:A (1.5) BS02 GLC 1.1.1.432 GO:0005829 ... A9CEY6 35074914
    606934 7bc2:A (2.0) BS01 T8Z ? N/A Q9UIF9 36105334
    606935 7bc4:B (3.1) BS01 FMN 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59
    GO:0004312 ... C4QVT8 33963233
    606936 7bc7:A (3.3) BS01 LYA ? GO:0005542 ... F1NJ67 34040256
    606937 7bc8:A (1.74) BS01 TAH 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606938 7bc9:A (1.73) BS01 UR4 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606939 7bca:A (2.8) BS01 dna ? N/A Q6I6B7 36370103
    606940 7bca:A (2.8) BS02 dna ? N/A Q6I6B7 36370103
    606941 7bca:B (2.8) BS01 dna ? N/A Q6I6B7 36370103
    606942 7bca:B (2.8) BS02 dna ? N/A Q6I6B7 36370103
    606943 7bcb:A (2.8) BS01 dna ? N/A Q6I6B7 36370103
    606944 7bcb:B (2.8) BS01 dna ? N/A Q6I6B7 36370103
    606945 7bcb:B (2.8) BS02 dna ? N/A Q6I6B7 36370103
    606946 7bcc:A (1.58) BS01 TB5 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606947 7bcd:A (1.51) BS01 T9Z 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606948 7bcf:A (1.86) BS01 T9W 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606949 7bch:A (1.7) BS01 T9Q 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606950 7bci:A (1.94) BS01 GVV 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606951 7bci:A (1.94) BS02 GVV 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606952 7bck:A (1.7) BS01 T9B 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606953 7bcl:A (1.84) BS01 T9K 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606954 7bcm:A (2.3) BS01 TBK 2.7.10.1 GO:0004672 ... Q08345 34506142
    606955 7bcm:B (2.3) BS01 TBK 2.7.10.1 GO:0004672 ... Q08345 34506142
    606956 7bcn:A (1.7) BS01 TK8 ? GO:0030288 ... R4JTF7 33630388
    606957 7bco:A (2.0) BS01 TF8 ? GO:0030288 ... R4JTF7 33630388
    606958 7bco:B (2.0) BS01 TF8 ? GO:0030288 ... R4JTF7 33630388
    606959 7bcp:A (2.0) BS01 GCO ? GO:0030288 ... R4JTF7 33630388
    606960 7bcq:A (3.43) BS01 TG2 ? GO:0001618 ... Q15758 34507995
    606961 7bcq:B (3.43) BS01 TG2 ? GO:0001618 ... Q15758 34507995
    606962 7bcq:C (3.43) BS01 TG2 ? GO:0001618 ... Q15758 34507995
    606963 7bcr:A (2.0) BS01 2Q2 ? GO:0030288 ... R4JTF7 33630388
    606964 7bcs:A (3.43) BS01 TJ5 ? GO:0001618 ... Q15758 34507995
    606965 7bcs:B (3.43) BS01 TJ5 ? GO:0001618 ... Q15758 34507995
    606966 7bcs:C (3.43) BS01 TJ5 ? GO:0001618 ... Q15758 34507995
    606967 7bcu:A (0.98) BS01 IMD 3.2.1.17 GO:0003796 ... P00698 34197115
    606968 7bcw:A (3.5) BS01 VO4 7.5.2.6 GO:0005524 ... P60752 34921499
    606969 7bcw:A (3.5) BS02 ADP 7.5.2.6 GO:0005524 ... P60752 34921499
    606970 7bcw:A (3.5) BS03 MG 7.5.2.6 GO:0005524 ... P60752 34921499
    606971 7bcw:A (3.5) BS04 VO4 7.5.2.6 GO:0005524 ... P60752 34921499
    606972 7bcw:A (3.5) BS05 ADP 7.5.2.6 GO:0005524 ... P60752 34921499
    606973 7bcw:B (3.5) BS01 VO4 7.5.2.6 GO:0005524 ... P60752 34921499
    606974 7bcw:B (3.5) BS02 ADP 7.5.2.6 GO:0005524 ... P60752 34921499
    606975 7bcw:B (3.5) BS03 VO4 7.5.2.6 GO:0005524 ... P60752 34921499
    606976 7bcw:B (3.5) BS04 ADP 7.5.2.6 GO:0005524 ... P60752 34921499
    606977 7bcw:B (3.5) BS05 MG 7.5.2.6 GO:0005524 ... P60752 34921499
    606978 7bcx:A (1.06) BS01 IMD 3.2.1.17 GO:0003796 ... P00698 34197115
    606979 7bcy:A (1.5) BS01 peptide ? GO:0000122 ... P61964 34850113
    606980 7bcy:A (1.5) BS02 peptide ? GO:0000122 ... P61964 34850113
    606981 7bcy:B (1.5) BS01 peptide ? GO:0000122 ... P61964 34850113
    606982 7bcz:A (2.4) BS01 COA ? GO:0000287 ... Q9I4H2 34508141
    606983 7bcz:B (2.4) BS01 COA ? GO:0000287 ... Q9I4H2 34508141
    606984 7bcz:C (2.4) BS01 COA ? GO:0000287 ... Q9I4H2 34508141
    606985 7bcz:C (2.4) BS02 MG ? GO:0000287 ... Q9I4H2 34508141
    606986 7bcz:D (2.4) BS01 COA ? GO:0000287 ... Q9I4H2 34508141
    606987 7bd0:A (1.06) BS01 IMD 3.2.1.17 GO:0003796 ... P00698 34197115
    606988 7bd2:A (1.52) BS01 NUM 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606989 7bd3:A (1.91) BS01 TE5 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606990 7bd4:A (1.8) BS01 JHJ 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606991 7bd5:A (1.69) BS01 YI6 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606992 7bd6:A (1.7) BS01 JH7 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606993 7bd7:A (1.5) BS01 A6R ? GO:0005506 ... P02791 33668605
    606994 7bd8:A (1.42) BS01 QL5 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606995 7bd9:A (1.59) BS01 GW1 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606996 7bda:A (1.47) BS01 O1J 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606997 7bdb:A (1.46) BS01 NW7 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606998 7bdc:A (1.32) BS01 WNA 3.1.1.98 GO:0016787 ... Q6P988 35731924
    606999 7bdd:A (1.47) BS01 TE8 3.1.1.98 GO:0016787 ... Q6P988 35731924
    607000 7bde:A (2.044) BS01 TEQ ? N/A P41182 34274316

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).