SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    607201 7bg4:B (4.2) BS04 RHQ 7.6.2.- GO:0005524 ... O06967 35080979
    607202 7bg5:AAA (1.428) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 34232641
    607203 7bg5:AAA (1.428) BS02 TKQ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 34232641
    607204 7bg8:C (4.0) BS01 peptide ? GO:0005198 ... Q80AG2 33658338
    607205 7bg9:A (3.8) BS01 dna 2.7.7.49 GO:0000049 ... O14746 33883742
    607206 7bg9:A (3.8) BS02 rna 2.7.7.49 GO:0000049 ... O14746 33883742
    607207 7bg9:L (3.8) BS01 rna ? GO:0000786 ... P0C0S8 33883742
    607208 7bg9:M (3.8) BS01 rna ? GO:0000786 ... B4DR52 33883742
    607209 7bgb:C (3.4) BS01 rna 5.4.99.- GO:0000455 ... O60832 33883742
    607210 7bgb:G (3.4) BS01 rna 5.4.99.- GO:0000455 ... O60832 33883742
    607211 7bgb:I (3.4) BS01 rna ? GO:0000454 ... Q9NX24 33883742
    607212 7bgb:K (3.4) BS01 rna ? GO:0000781 ... Q9BUR4 33883742
    607213 7bgc:A (2.4) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 33829779
    607214 7bgc:A (2.4) BS02 TKN 3.1.1.8 GO:0001540 ... P06276 33829779
    607215 7bgd:b (3.2) BS01 rna ? GO:0003735 ... Q2FZ25 N/A
    607216 7bgd:d (3.2) BS01 rna ? GO:0003723 ... Q2FXK6 N/A
    607217 7bgd:d (3.2) BS02 rna ? GO:0003723 ... Q2FXK6 N/A
    607218 7bgd:e (3.2) BS01 rna ? GO:0003723 ... Q2FW23 N/A
    607219 7bgd:e (3.2) BS02 rna ? GO:0003723 ... Q2FW23 N/A
    607220 7bgd:f (3.2) BS01 rna ? GO:0003735 ... Q2G113 N/A
    607221 7bgd:h (3.2) BS01 rna ? GO:0003735 ... Q2FW20 N/A
    607222 7bgd:k (3.2) BS01 rna ? GO:0003735 ... Q2FW31 N/A
    607223 7bgd:k (3.2) BS02 rna ? GO:0003735 ... Q2FW31 N/A
    607224 7bgd:l (3.2) BS01 rna ? GO:0000049 ... P0A0H0 N/A
    607225 7bgd:o (3.2) BS01 rna ? GO:0003735 ... Q2G2Q1 N/A
    607226 7bgd:p (3.2) BS01 rna ? GO:0003735 ... Q2FZ45 N/A
    607227 7bgd:q (3.2) BS01 rna ? GO:0003735 ... Q2FW15 N/A
    607228 7bgd:r (3.2) BS01 rna ? GO:0003735 ... Q2G111 N/A
    607229 7bgd:t (3.2) BS01 rna ? GO:0003723 ... Q2FXY6 N/A
    607230 7bge:b (3.6) BS01 rna ? GO:0003735 ... Q2FZ25 N/A
    607231 7bge:c (3.6) BS01 rna ? GO:0003676 ... Q2FW12 N/A
    607232 7bge:g (3.6) BS01 rna ? GO:0000028 ... P48940 N/A
    607233 7bge:i (3.6) BS01 rna ? GO:0003723 ... Q2FW39 N/A
    607234 7bge:j (3.6) BS01 rna ? GO:0000049 ... Q931G5 N/A
    607235 7bge:m (3.6) BS01 rna ? GO:0000049 ... Q2FW30 N/A
    607236 7bge:n (3.6) BS01 rna ? GO:0003735 ... Q2FW19 N/A
    607237 7bge:s (3.6) BS01 rna ? GO:0000028 ... Q2FW10 N/A
    607238 7bgg:A (1.04) BS01 SAH 2.1.1.374 GO:0001666 ... P9WKL5 34506908
    607239 7bgi:1 (2.54) BS01 CLA ? GO:0009765 ... Q05093 N/A
    607240 7bgi:1 (2.54) BS02 C7Z ? GO:0009765 ... Q05093 N/A
    607241 7bgi:1 (2.54) BS03 CLA ? GO:0009765 ... Q05093 N/A
    607242 7bgi:1 (2.54) BS04 CLA ? GO:0009765 ... Q05093 N/A
    607243 7bgi:1 (2.54) BS05 CLA ? GO:0009765 ... Q05093 N/A
    607244 7bgi:1 (2.54) BS06 CLA ? GO:0009765 ... Q05093 N/A
    607245 7bgi:1 (2.54) BS07 CLA ? GO:0009765 ... Q05093 N/A
    607246 7bgi:1 (2.54) BS08 CLA ? GO:0009765 ... Q05093 N/A
    607247 7bgi:1 (2.54) BS09 CLA ? GO:0009765 ... Q05093 N/A
    607248 7bgi:1 (2.54) BS10 CLA ? GO:0009765 ... Q05093 N/A
    607249 7bgi:1 (2.54) BS11 CHL ? GO:0009765 ... Q05093 N/A
    607250 7bgi:1 (2.54) BS12 CLA ? GO:0009765 ... Q05093 N/A
    607251 7bgi:1 (2.54) BS13 CLA ? GO:0009765 ... Q05093 N/A
    607252 7bgi:1 (2.54) BS14 CLA ? GO:0009765 ... Q05093 N/A
    607253 7bgi:1 (2.54) BS15 CLA ? GO:0009765 ... Q05093 N/A
    607254 7bgi:1 (2.54) BS16 CHL ? GO:0009765 ... Q05093 N/A
    607255 7bgi:2 (2.54) BS01 CLA ? GO:0009765 ... A8IKC8 N/A
    607256 7bgi:2 (2.54) BS02 CLA ? GO:0009765 ... A8IKC8 N/A
    607257 7bgi:2 (2.54) BS03 CLA ? GO:0009765 ... A8IKC8 N/A
    607258 7bgi:2 (2.54) BS04 CLA ? GO:0009765 ... A8IKC8 N/A
    607259 7bgi:2 (2.54) BS05 CLA ? GO:0009765 ... A8IKC8 N/A
    607260 7bgi:2 (2.54) BS06 CLA ? GO:0009765 ... A8IKC8 N/A
    607261 7bgi:2 (2.54) BS07 CLA ? GO:0009765 ... A8IKC8 N/A
    607262 7bgi:2 (2.54) BS08 CLA ? GO:0009765 ... A8IKC8 N/A
    607263 7bgi:2 (2.54) BS09 CHL ? GO:0009765 ... A8IKC8 N/A
    607264 7bgi:2 (2.54) BS10 CHL ? GO:0009765 ... A8IKC8 N/A
    607265 7bgi:2 (2.54) BS11 CLA ? GO:0009765 ... A8IKC8 N/A
    607266 7bgi:2 (2.54) BS12 CHL ? GO:0009765 ... A8IKC8 N/A
    607267 7bgi:2 (2.54) BS13 CLA ? GO:0009765 ... A8IKC8 N/A
    607268 7bgi:3 (2.54) BS01 CLA ? GO:0009765 ... Q75VY9 N/A
    607269 7bgi:3 (2.54) BS02 CLA ? GO:0009765 ... Q75VY9 N/A
    607270 7bgi:3 (2.54) BS03 CLA ? GO:0009765 ... Q75VY9 N/A
    607271 7bgi:3 (2.54) BS04 CLA ? GO:0009765 ... Q75VY9 N/A
    607272 7bgi:3 (2.54) BS05 CLA ? GO:0009765 ... Q75VY9 N/A
    607273 7bgi:3 (2.54) BS06 CLA ? GO:0009765 ... Q75VY9 N/A
    607274 7bgi:3 (2.54) BS07 CLA ? GO:0009765 ... Q75VY9 N/A
    607275 7bgi:3 (2.54) BS08 CLA ? GO:0009765 ... Q75VY9 N/A
    607276 7bgi:3 (2.54) BS09 CLA ? GO:0009765 ... Q75VY9 N/A
    607277 7bgi:3 (2.54) BS10 CLA ? GO:0009765 ... Q75VY9 N/A
    607278 7bgi:3 (2.54) BS11 CLA ? GO:0009765 ... Q75VY9 N/A
    607279 7bgi:3 (2.54) BS12 CLA ? GO:0009765 ... Q75VY9 N/A
    607280 7bgi:3 (2.54) BS13 CLA ? GO:0009765 ... Q75VY9 N/A
    607281 7bgi:3 (2.54) BS14 CHL ? GO:0009765 ... Q75VY9 N/A
    607282 7bgi:3 (2.54) BS15 CLA ? GO:0009765 ... Q75VY9 N/A
    607283 7bgi:3 (2.54) BS16 CLA ? GO:0009765 ... Q75VY9 N/A
    607284 7bgi:3 (2.54) BS17 NKP ? GO:0009765 ... Q75VY9 N/A
    607285 7bgi:3 (2.54) BS18 CLA ? GO:0009765 ... Q75VY9 N/A
    607286 7bgi:4 (2.54) BS01 CHL ? GO:0009765 ... Q75VZ0 N/A
    607287 7bgi:4 (2.54) BS02 CLA ? GO:0009765 ... Q75VZ0 N/A
    607288 7bgi:4 (2.54) BS03 CLA ? GO:0009765 ... Q75VZ0 N/A
    607289 7bgi:4 (2.54) BS04 CLA ? GO:0009765 ... Q75VZ0 N/A
    607290 7bgi:4 (2.54) BS05 CLA ? GO:0009765 ... Q75VZ0 N/A
    607291 7bgi:4 (2.54) BS06 CLA ? GO:0009765 ... Q75VZ0 N/A
    607292 7bgi:4 (2.54) BS07 CLA ? GO:0009765 ... Q75VZ0 N/A
    607293 7bgi:4 (2.54) BS08 CLA ? GO:0009765 ... Q75VZ0 N/A
    607294 7bgi:4 (2.54) BS09 CLA ? GO:0009765 ... Q75VZ0 N/A
    607295 7bgi:4 (2.54) BS10 CHL ? GO:0009765 ... Q75VZ0 N/A
    607296 7bgi:4 (2.54) BS11 CHL ? GO:0009765 ... Q75VZ0 N/A
    607297 7bgi:4 (2.54) BS12 CLA ? GO:0009765 ... Q75VZ0 N/A
    607298 7bgi:4 (2.54) BS13 CHL ? GO:0009765 ... Q75VZ0 N/A
    607299 7bgi:4 (2.54) BS14 CLA ? GO:0009765 ... Q75VZ0 N/A
    607300 7bgi:4 (2.54) BS15 CHL ? GO:0009765 ... Q75VZ0 N/A
    607301 7bgi:4 (2.54) BS16 CLA ? GO:0009765 ... Q75VZ0 N/A
    607302 7bgi:5 (2.54) BS01 CLA ? GO:0009765 ... Q75VY8 N/A
    607303 7bgi:5 (2.54) BS02 C7Z ? GO:0009765 ... Q75VY8 N/A
    607304 7bgi:5 (2.54) BS03 CLA ? GO:0009765 ... Q75VY8 N/A
    607305 7bgi:5 (2.54) BS04 CLA ? GO:0009765 ... Q75VY8 N/A
    607306 7bgi:5 (2.54) BS05 CLA ? GO:0009765 ... Q75VY8 N/A
    607307 7bgi:5 (2.54) BS06 CLA ? GO:0009765 ... Q75VY8 N/A
    607308 7bgi:5 (2.54) BS07 CLA ? GO:0009765 ... Q75VY8 N/A
    607309 7bgi:5 (2.54) BS08 CLA ? GO:0009765 ... Q75VY8 N/A
    607310 7bgi:5 (2.54) BS09 CLA ? GO:0009765 ... Q75VY8 N/A
    607311 7bgi:5 (2.54) BS10 CLA ? GO:0009765 ... Q75VY8 N/A
    607312 7bgi:5 (2.54) BS11 CLA ? GO:0009765 ... Q75VY8 N/A
    607313 7bgi:5 (2.54) BS12 CHL ? GO:0009765 ... Q75VY8 N/A
    607314 7bgi:5 (2.54) BS13 CHL ? GO:0009765 ... Q75VY8 N/A
    607315 7bgi:5 (2.54) BS14 CLA ? GO:0009765 ... Q75VY8 N/A
    607316 7bgi:5 (2.54) BS15 CLA ? GO:0009765 ... Q75VY8 N/A
    607317 7bgi:5 (2.54) BS16 CLA ? GO:0009765 ... Q75VY8 N/A
    607318 7bgi:5 (2.54) BS17 CHL ? GO:0009765 ... Q75VY8 N/A
    607319 7bgi:5 (2.54) BS18 CLA ? GO:0009765 ... Q75VY8 N/A
    607320 7bgi:5 (2.54) BS19 CLA ? GO:0009765 ... Q75VY8 N/A
    607321 7bgi:5 (2.54) BS20 CLA ? GO:0009765 ... Q75VY8 N/A
    607322 7bgi:5 (2.54) BS21 CLA ? GO:0009765 ... Q75VY8 N/A
    607323 7bgi:6 (2.54) BS01 CLA ? GO:0009765 ... Q75VY6 N/A
    607324 7bgi:6 (2.54) BS02 CLA ? GO:0009765 ... Q75VY6 N/A
    607325 7bgi:6 (2.54) BS03 CLA ? GO:0009765 ... Q75VY6 N/A
    607326 7bgi:6 (2.54) BS04 CLA ? GO:0009765 ... Q75VY6 N/A
    607327 7bgi:6 (2.54) BS05 CLA ? GO:0009765 ... Q75VY6 N/A
    607328 7bgi:6 (2.54) BS06 CLA ? GO:0009765 ... Q75VY6 N/A
    607329 7bgi:6 (2.54) BS07 CLA ? GO:0009765 ... Q75VY6 N/A
    607330 7bgi:6 (2.54) BS08 CLA ? GO:0009765 ... Q75VY6 N/A
    607331 7bgi:6 (2.54) BS09 CLA ? GO:0009765 ... Q75VY6 N/A
    607332 7bgi:6 (2.54) BS10 CLA ? GO:0009765 ... Q75VY6 N/A
    607333 7bgi:6 (2.54) BS11 CLA ? GO:0009765 ... Q75VY6 N/A
    607334 7bgi:6 (2.54) BS12 CLA ? GO:0009765 ... Q75VY6 N/A
    607335 7bgi:6 (2.54) BS13 CHL ? GO:0009765 ... Q75VY6 N/A
    607336 7bgi:6 (2.54) BS14 CHL ? GO:0009765 ... Q75VY6 N/A
    607337 7bgi:6 (2.54) BS15 CLA ? GO:0009765 ... Q75VY6 N/A
    607338 7bgi:6 (2.54) BS16 CHL ? GO:0009765 ... Q75VY6 N/A
    607339 7bgi:6 (2.54) BS17 CLA ? GO:0009765 ... Q75VY6 N/A
    607340 7bgi:6 (2.54) BS18 CHL ? GO:0009765 ... Q75VY6 N/A
    607341 7bgi:6 (2.54) BS19 CLA ? GO:0009765 ... Q75VY6 N/A
    607342 7bgi:6 (2.54) BS20 CLA ? GO:0009765 ... Q75VY6 N/A
    607343 7bgi:7 (2.54) BS01 CLA ? GO:0009765 ... Q84Y02 N/A
    607344 7bgi:7 (2.54) BS02 CLA ? GO:0009765 ... Q84Y02 N/A
    607345 7bgi:7 (2.54) BS03 CLA ? GO:0009765 ... Q84Y02 N/A
    607346 7bgi:7 (2.54) BS04 CLA ? GO:0009765 ... Q84Y02 N/A
    607347 7bgi:7 (2.54) BS05 CLA ? GO:0009765 ... Q84Y02 N/A
    607348 7bgi:7 (2.54) BS06 CLA ? GO:0009765 ... Q84Y02 N/A
    607349 7bgi:7 (2.54) BS07 CLA ? GO:0009765 ... Q84Y02 N/A
    607350 7bgi:7 (2.54) BS08 CLA ? GO:0009765 ... Q84Y02 N/A
    607351 7bgi:7 (2.54) BS09 CLA ? GO:0009765 ... Q84Y02 N/A
    607352 7bgi:7 (2.54) BS10 CHL ? GO:0009765 ... Q84Y02 N/A
    607353 7bgi:7 (2.54) BS11 CLA ? GO:0009765 ... Q84Y02 N/A
    607354 7bgi:7 (2.54) BS12 CLA ? GO:0009765 ... Q84Y02 N/A
    607355 7bgi:7 (2.54) BS13 CLA ? GO:0009765 ... Q84Y02 N/A
    607356 7bgi:7 (2.54) BS14 CLA ? GO:0009765 ... Q84Y02 N/A
    607357 7bgi:7 (2.54) BS15 CLA ? GO:0009765 ... Q84Y02 N/A
    607358 7bgi:7 (2.54) BS16 CLA ? GO:0009765 ... Q84Y02 N/A
    607359 7bgi:7 (2.54) BS17 CLA ? GO:0009765 ... Q84Y02 N/A
    607360 7bgi:8 (2.54) BS01 CHL ? GO:0009765 ... Q75VY7 N/A
    607361 7bgi:8 (2.54) BS02 CLA ? GO:0009765 ... Q75VY7 N/A
    607362 7bgi:8 (2.54) BS03 CLA ? GO:0009765 ... Q75VY7 N/A
    607363 7bgi:8 (2.54) BS04 CLA ? GO:0009765 ... Q75VY7 N/A
    607364 7bgi:8 (2.54) BS05 CLA ? GO:0009765 ... Q75VY7 N/A
    607365 7bgi:8 (2.54) BS06 CLA ? GO:0009765 ... Q75VY7 N/A
    607366 7bgi:8 (2.54) BS07 CLA ? GO:0009765 ... Q75VY7 N/A
    607367 7bgi:8 (2.54) BS08 CLA ? GO:0009765 ... Q75VY7 N/A
    607368 7bgi:8 (2.54) BS09 CLA ? GO:0009765 ... Q75VY7 N/A
    607369 7bgi:8 (2.54) BS10 CHL ? GO:0009765 ... Q75VY7 N/A
    607370 7bgi:8 (2.54) BS11 CLA ? GO:0009765 ... Q75VY7 N/A
    607371 7bgi:8 (2.54) BS12 CLA ? GO:0009765 ... Q75VY7 N/A
    607372 7bgi:8 (2.54) BS13 CHL ? GO:0009765 ... Q75VY7 N/A
    607373 7bgi:8 (2.54) BS14 CLA ? GO:0009765 ... Q75VY7 N/A
    607374 7bgi:9 (2.54) BS01 CLA ? GO:0009765 ... A8ITV3 N/A
    607375 7bgi:9 (2.54) BS02 CHL ? GO:0009765 ... A8ITV3 N/A
    607376 7bgi:9 (2.54) BS03 CLA ? GO:0009765 ... A8ITV3 N/A
    607377 7bgi:9 (2.54) BS04 CLA ? GO:0009765 ... A8ITV3 N/A
    607378 7bgi:9 (2.54) BS05 CLA ? GO:0009765 ... A8ITV3 N/A
    607379 7bgi:9 (2.54) BS06 CLA ? GO:0009765 ... A8ITV3 N/A
    607380 7bgi:9 (2.54) BS07 CLA ? GO:0009765 ... A8ITV3 N/A
    607381 7bgi:9 (2.54) BS08 CLA ? GO:0009765 ... A8ITV3 N/A
    607382 7bgi:9 (2.54) BS09 CLA ? GO:0009765 ... A8ITV3 N/A
    607383 7bgi:9 (2.54) BS10 CLA ? GO:0009765 ... A8ITV3 N/A
    607384 7bgi:9 (2.54) BS11 CLA ? GO:0009765 ... A8ITV3 N/A
    607385 7bgi:9 (2.54) BS12 CHL ? GO:0009765 ... A8ITV3 N/A
    607386 7bgi:9 (2.54) BS13 CLA ? GO:0009765 ... A8ITV3 N/A
    607387 7bgi:9 (2.54) BS14 CHL ? GO:0009765 ... A8ITV3 N/A
    607388 7bgi:A (2.54) BS01 CL0 1.97.1.12 GO:0000287 ... P12154 N/A
    607389 7bgi:A (2.54) BS02 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607390 7bgi:A (2.54) BS03 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607391 7bgi:A (2.54) BS04 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607392 7bgi:A (2.54) BS05 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607393 7bgi:A (2.54) BS06 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607394 7bgi:A (2.54) BS07 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607395 7bgi:A (2.54) BS08 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607396 7bgi:A (2.54) BS09 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607397 7bgi:A (2.54) BS10 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607398 7bgi:A (2.54) BS11 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607399 7bgi:A (2.54) BS12 CLA 1.97.1.12 GO:0000287 ... P12154 N/A
    607400 7bgi:A (2.54) BS13 CLA 1.97.1.12 GO:0000287 ... P12154 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).