SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    607801 7bil:A (2.21) BS02 ADP ? GO:0000166 ... K7RJ88 33784404
    607802 7bil:A (2.21) BS03 ALF ? GO:0000166 ... K7RJ88 33784404
    607803 7bil:B (2.21) BS01 dna ? GO:0000166 ... K7RJ88 33784404
    607804 7bil:B (2.21) BS02 ADP ? GO:0000166 ... K7RJ88 33784404
    607805 7bil:B (2.21) BS03 ALF ? GO:0000166 ... K7RJ88 33784404
    607806 7bim:B (1.64) BS01 peptide N/A N/A N/A 34745518
    607807 7bim:D (1.64) BS01 peptide N/A N/A N/A 34745518
    607808 7bim:F (1.64) BS01 peptide N/A N/A N/A 34745518
    607809 7bim:F (1.64) BS02 peptide N/A N/A N/A 34745518
    607810 7bim:H (1.64) BS01 peptide N/A N/A N/A 34745518
    607811 7bim:M (1.64) BS01 peptide N/A N/A N/A 34745518
    607812 7bim:P (1.64) BS01 peptide N/A N/A N/A 34745518
    607813 7bim:P (1.64) BS02 peptide N/A N/A N/A 34745518
    607814 7bim:R (1.64) BS01 peptide N/A N/A N/A 34745518
    607815 7bim:U (1.64) BS01 peptide N/A N/A N/A 34745518
    607816 7bim:W (1.64) BS01 peptide N/A N/A N/A 34745518
    607817 7bim:a (1.64) BS01 peptide N/A N/A N/A 34745518
    607818 7bim:c (1.64) BS01 peptide N/A N/A N/A 34745518
    607819 7bim:g (1.64) BS01 peptide N/A N/A N/A 34745518
    607820 7bim:i (1.64) BS01 peptide N/A N/A N/A 34745518
    607821 7bim:j (1.64) BS01 peptide N/A N/A N/A 34745518
    607822 7bim:j (1.64) BS02 peptide N/A N/A N/A 34745518
    607823 7bip:B (1.6) BS01 CA ? GO:0004497 ... W8QPS6 33763824
    607824 7biq:A (1.2) BS01 peptide ? GO:0000122 ... P31947 34076416
    607825 7biq:A (1.2) BS02 TVB ? GO:0000122 ... P31947 34076416
    607826 7biq:A (1.2) BS03 CA ? GO:0000122 ... P31947 34076416
    607827 7bir:A (2.02) BS01 TUZ 2.3.2.27 GO:0005634 ... Q00987 33761253
    607828 7bis:A (1.96) BS01 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607829 7bis:B (1.96) BS01 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607830 7bis:B (1.96) BS02 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607831 7bis:C (1.96) BS01 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607832 7bis:C (1.96) BS02 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607833 7bis:D (1.96) BS01 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607834 7bis:D (1.96) BS02 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607835 7bis:E (1.96) BS01 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607836 7bis:E (1.96) BS02 TZQ 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607837 7bit:A (2.13) BS01 TV5 2.3.2.27 GO:0005634 ... Q00987 33761253
    607838 7biu:A (1.06) BS01 HEC 1.11.1.5 GO:0004601 ... P00431 33826799
    607839 7biv:A (1.64) BS01 TUW 2.3.2.27 GO:0005634 ... Q00987 33761253
    607840 7biw:A (1.2) BS01 peptide ? GO:0000122 ... P31947 34076416
    607841 7biw:A (1.2) BS02 TW8 ? GO:0000122 ... P31947 34076416
    607842 7biw:A (1.2) BS03 CA ? GO:0000122 ... P31947 34076416
    607843 7bix:A (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607844 7bix:B (3.12) BS01 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607845 7bix:B (3.12) BS02 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607846 7bix:C (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607847 7bix:C (3.12) BS02 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607848 7bix:C (3.12) BS03 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607849 7bix:D (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607850 7bix:D (3.12) BS02 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607851 7bix:E (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607852 7bix:E (3.12) BS02 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607853 7bix:G (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607854 7bix:H (3.12) BS01 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607855 7bix:H (3.12) BS02 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607856 7bix:I (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607857 7bix:I (3.12) BS02 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607858 7bix:I (3.12) BS03 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607859 7bix:J (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607860 7bix:J (3.12) BS02 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607861 7bix:K (3.12) BS01 UTP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607862 7bix:K (3.12) BS02 UDP 2.7.4.22 GO:0000287 ... P9WHK5 35152545
    607863 7biy:A (1.8) BS01 peptide ? GO:0000122 ... P31947 34076416
    607864 7biy:A (1.8) BS02 TWE ? GO:0000122 ... P31947 34076416
    607865 7biz:A (1.53) BS01 CNC ? N/A Q8A6C8 35227073
    607866 7biz:A (1.53) BS02 CA ? N/A Q8A6C8 35227073
    607867 7biz:A (1.53) BS03 CA ? N/A Q8A6C8 35227073
    607868 7biz:B (1.53) BS01 CNC ? N/A Q8A6C8 35227073
    607869 7biz:B (1.53) BS02 CA ? N/A Q8A6C8 35227073
    607870 7biz:B (1.53) BS03 CA ? N/A Q8A6C8 35227073
    607871 7bj0:A (2.0) BS01 TVH 2.3.2.27 GO:0005634 ... Q00987 33761253 BindingDB: IC50=1260nM
    607872 7bj0:A (2.0) BS02 TVH 2.3.2.27 GO:0005634 ... Q00987 33761253 BindingDB: IC50=1260nM
    607873 7bj0:B (2.0) BS01 TVH 2.3.2.27 GO:0005634 ... Q00987 33761253 BindingDB: IC50=1260nM
    607874 7bj0:B (2.0) BS02 TVH 2.3.2.27 GO:0005634 ... Q00987 33761253 BindingDB: IC50=1260nM
    607875 7bj1:A (1.61) BS01 SAM 2.1.1.354 GO:0000978 ... Q9H7B4 N/A
    607876 7bj1:A (1.61) BS02 QKT 2.1.1.354 GO:0000978 ... Q9H7B4 N/A
    607877 7bj1:A (1.61) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 N/A
    607878 7bj1:A (1.61) BS04 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 N/A
    607879 7bj1:A (1.61) BS05 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 N/A
    607880 7bj3:A (2.6) BS01 CA 3.4.21.110 GO:0004252 ... P58099 33897974
    607881 7bj4:A (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607882 7bj4:A (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607883 7bj4:A (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607884 7bj4:B (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607885 7bj4:B (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607886 7bj4:B (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607887 7bj4:C (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607888 7bj4:C (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607889 7bj4:C (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607890 7bj4:D (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607891 7bj4:D (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607892 7bj4:E (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607893 7bj4:E (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607894 7bj4:E (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607895 7bj4:F (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607896 7bj4:F (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607897 7bj4:F (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607898 7bj4:G (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607899 7bj4:G (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607900 7bj4:G (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607901 7bj4:H (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607902 7bj4:H (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607903 7bj4:H (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607904 7bj4:I (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607905 7bj4:I (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607906 7bj4:I (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607907 7bj4:J (2.72) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607908 7bj4:J (2.72) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607909 7bj4:J (2.72) BS03 FRU ? GO:0009758 ... D8J9C2 33783128
    607910 7bj6:A (1.59) BS01 TVK 2.3.2.27 GO:0005634 ... Q00987 33761253
    607911 7bj8:A (1.69) BS01 QST 3.5.2.6 GO:0008270 ... P52700 34355567
    607912 7bj8:A (1.69) BS02 ZN 3.5.2.6 GO:0008270 ... P52700 34355567
    607913 7bj8:A (1.69) BS03 ZN 3.5.2.6 GO:0008270 ... P52700 34355567
    607914 7bj9:A (1.21001) BS01 ZN 3.5.2.6 GO:0008270 ... Q9RMI1 34355567
    607915 7bj9:A (1.21001) BS02 TWW 3.5.2.6 GO:0008270 ... Q9RMI1 34355567
    607916 7bj9:B (1.21001) BS01 ZN 3.5.2.6 GO:0008270 ... Q9RMI1 34355567
    607917 7bj9:B (1.21001) BS02 TWW 3.5.2.6 GO:0008270 ... Q9RMI1 34355567
    607918 7bjb:A (1.8) BS01 peptide ? GO:0000122 ... P31947 34076416
    607919 7bjb:A (1.8) BS02 TZK ? GO:0000122 ... P31947 34076416
    607920 7bjb:A (1.8) BS03 CA ? GO:0000122 ... P31947 34076416
    607921 7bjc:A (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607922 7bjc:A (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607923 7bjc:B (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607924 7bjc:B (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607925 7bjc:C (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607926 7bjc:C (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607927 7bjc:D (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607928 7bjc:D (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607929 7bjc:E (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607930 7bjc:E (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607931 7bjc:F (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607932 7bjc:F (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607933 7bjc:G (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607934 7bjc:G (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607935 7bjc:H (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607936 7bjc:H (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607937 7bjc:I (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607938 7bjc:I (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607939 7bjc:J (3.11) BS01 GLC ? GO:0009758 ... D8J9C2 33783128
    607940 7bjc:J (3.11) BS02 FRU ? GO:0009758 ... D8J9C2 33783128
    607941 7bjd:A (2.0) BS01 TVT 2.7.11.1 GO:0000077 ... O14757 34184879
    607942 7bje:A (1.8) BS01 ADE 2.7.11.1 GO:0000077 ... O14757 34184879
    607943 7bjf:A (1.4) BS01 peptide ? GO:0000122 ... P31947 34076416
    607944 7bjf:A (1.4) BS02 TZH ? GO:0000122 ... P31947 34076416
    607945 7bjh:A (1.8) BS01 42C 2.7.11.1 GO:0000077 ... O14757 34184879
    607946 7bjj:A (1.8) BS01 TVW 2.7.11.1 GO:0000077 ... O14757 34184879
    607947 7bjk:A (2.25) BS01 ZN 1.15.1.1 GO:0004784 ... Q9LU64 34276730
    607948 7bjk:B (2.25) BS01 ZN 1.15.1.1 GO:0004784 ... Q9LU64 34276730
    607949 7bjk:C (2.25) BS01 ZN 1.15.1.1 GO:0004784 ... Q9LU64 34276730
    607950 7bjk:D (2.25) BS01 ZN 1.15.1.1 GO:0004784 ... Q9LU64 34276730
    607951 7bjk:E (2.25) BS01 ZN 1.15.1.1 GO:0004784 ... Q9LU64 34276730
    607952 7bjl:A (1.4) BS01 peptide ? GO:0000122 ... P31947 34076416
    607953 7bjl:A (1.4) BS02 TWQ ? GO:0000122 ... P31947 34076416
    607954 7bjm:A (2.3) BS01 TW2 2.7.11.1 GO:0000077 ... O14757 34184879
    607955 7bjo:A (2.3) BS01 TWK 2.7.11.1 GO:0000077 ... O14757 34184879
    607956 7bjq:A (2.7) BS01 dna ? GO:0000166 ... O27473 N/A
    607957 7bjq:A (2.7) BS02 dna ? GO:0000166 ... O27473 N/A
    607958 7bjq:A (2.7) BS03 MN ? GO:0000166 ... O27473 N/A
    607959 7bjq:A (2.7) BS04 MN ? GO:0000166 ... O27473 N/A
    607960 7bjq:B (2.7) BS01 dna ? GO:0000166 ... O27473 N/A
    607961 7bjq:B (2.7) BS02 MN ? GO:0000166 ... O27473 N/A
    607962 7bjq:B (2.7) BS03 MN ? GO:0000166 ... O27473 N/A
    607963 7bjr:A (1.9) BS01 TWH 2.7.11.1 GO:0000077 ... O14757 34184879
    607964 7bjt:A (1.42) BS01 CA 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607965 7bjt:A (1.42) BS02 MG 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607966 7bjt:A (1.42) BS03 MG 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607967 7bjt:A (1.42) BS04 CA 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607968 7bjt:B (1.42) BS01 MG 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607969 7bjt:B (1.42) BS02 CA 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607970 7bjt:B (1.42) BS03 MG 4.2.2.3 GO:0016829 ... G0LCA3 34184062
    607971 7bju:A (2.85) BS01 EPH ? GO:0003677 ... A0A2A4K9Z3 33746550
    607972 7bju:D (2.85) BS01 834 ? GO:0003677 ... O18473 33746550
    607973 7bjv:A (3.05) BS01 EPH ? GO:0003677 ... A0A2A4K9Z3 33746550
    607974 7bjv:B (3.05) BS01 EPH ? GO:0003677 ... A0A2A4K9Z3 33746550
    607975 7bjv:C (3.05) BS01 EPH ? GO:0003677 ... A0A2A4K9Z3 33746550
    607976 7bjv:D (3.05) BS01 U0H ? GO:0003677 ... O18473 33746550
    607977 7bjv:D (3.05) BS02 MG ? GO:0003677 ... O18473 33746550
    607978 7bjv:E (3.05) BS01 U0H ? GO:0003677 ... O18473 33746550
    607979 7bjv:F (3.05) BS01 U0H ? GO:0003677 ... O18473 33746550
    607980 7bjw:A (1.4) BS01 peptide ? GO:0000122 ... P31947 34076416
    607981 7bjw:A (1.4) BS02 TZW ? GO:0000122 ... P31947 34076416
    607982 7bjx:A (2.4) BS01 U0Q 2.7.11.1 GO:0000077 ... O14757 34184879
    607983 7bjx:B (2.4) BS01 U0Q 2.7.11.1 GO:0000077 ... O14757 34184879
    607984 7bjy:A (2.22) BS01 79C ? N/A Q58F21 34710325
    607985 7bjy:B (2.22) BS01 79C ? N/A Q58F21 34710325
    607986 7bjz:A (2.13) BS01 MN 5.3.1.5 GO:0000287 ... P24300 34162863
    607987 7bjz:A (2.13) BS02 MN 5.3.1.5 GO:0000287 ... P24300 34162863
    607988 7bjz:B (2.13) BS01 MN 5.3.1.5 GO:0000287 ... P24300 34162863
    607989 7bjz:B (2.13) BS02 MN 5.3.1.5 GO:0000287 ... P24300 34162863
    607990 7bk1:A (2.0) BS01 U0N 2.7.11.1 GO:0000077 ... O14757 34184879
    607991 7bk2:A (2.0) BS01 U0K 2.7.11.1 GO:0000077 ... O14757 34184879
    607992 7bk3:A (2.0) BS01 U0T 2.7.11.1 GO:0000077 ... O14757 34184879
    607993 7bk4:A (2.8) BS01 peptide ? GO:0003677 ... P19793 33647291
    607994 7bk4:A (2.8) BS02 LG2 ? GO:0003677 ... P19793 33647291 BindingDB: IC50=8nM, Ki=13nM, EC50=40nM
    607995 7bk4:C (2.8) BS01 peptide ? GO:0003677 ... P19793 33647291
    607996 7bk4:C (2.8) BS02 LG2 ? GO:0003677 ... P19793 33647291 BindingDB: IC50=8nM, Ki=13nM, EC50=40nM
    607997 7bk5:AAA (1.54) BS01 CU ? GO:0005507 ... C3JYL7 33896006
    607998 7bk9:A (1.94) BS01 U0W 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    607999 7bk9:B (1.94) BS01 U0W 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A
    608000 7bk9:B (1.94) BS02 U0W 4.2.1.59
    5.3.3.14
    GO:0005737 ... O33877 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).