SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3036 3037 3038 3039 3040 3041 3042 3043 3044 3045 3046 3047 3048 3049 3050 3051 3052 3053 3054 3055 3056 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    609001 7bmg:A (1.83) BS01 U3Z 2.3.2.27 GO:0005634 ... Q00987 33761253 BindingDB: IC50=11.0nM
    609002 7bmi:A (1.66) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    609003 7bmi:A (1.66) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    609004 7bmi:A (1.66) BS03 U4B 1.14.11.16 GO:0018193 ... Q12797 N/A
    609005 7bmj:A (1.75) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 N/A
    609006 7bmj:A (1.75) BS02 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    609007 7bmj:A (1.75) BS03 U4Q 1.14.11.16 GO:0018193 ... Q12797 N/A
    609008 7bmj:C (1.75) BS01 MN 1.14.11.16 GO:0018193 ... Q12797 N/A
    609009 7bmj:C (1.75) BS02 U4Q 1.14.11.16 GO:0018193 ... Q12797 N/A
    609010 7bmk:A (1.85) BS01 U4N 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 34556859
    609011 7bmk:B (1.85) BS01 U4N 2.7.11.1
    3.1.26.-
    GO:0004521 ... O75460 34556859
    609012 7bmo:A (1.9) BS01 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609013 7bmo:A (1.9) BS02 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609014 7bmo:A (1.9) BS03 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609015 7bmo:A (1.9) BS04 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609016 7bmp:A (1.9) BS01 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609017 7bmp:A (1.9) BS02 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609018 7bmp:A (1.9) BS03 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609019 7bmp:A (1.9) BS04 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609020 7bmp:A (1.9) BS05 CS 3.2.1.17 GO:0003796 ... P00698 34426585
    609021 7bmp:A (1.9) BS06 CS 3.2.1.17 GO:0003796 ... P00698 34426585
    609022 7bmq:A (1.79) BS01 CS 3.2.1.17 GO:0003796 ... P00698 34426585
    609023 7bmq:A (1.79) BS02 CS 3.2.1.17 GO:0003796 ... P00698 34426585
    609024 7bmq:A (1.79) BS03 CS 3.2.1.17 GO:0003796 ... P00698 34426585
    609025 7bms:A (1.75) BS01 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609026 7bms:A (1.75) BS02 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609027 7bmt:A (1.47) BS01 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609028 7bmt:A (1.47) BS02 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609029 7bmt:A (1.47) BS03 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609030 7bmt:A (1.47) BS04 CL 3.2.1.17 GO:0003796 ... P00698 34426585
    609031 7bmu:A (1.9) BS01 CL ? GO:0000439 ... G0RZ08 34426585
    609032 7bmu:A (1.9) BS02 CS ? GO:0000439 ... G0RZ08 34426585
    609033 7bmv:A (1.9) BS01 CS ? GO:0000439 ... G0RZ08 34426585
    609034 7bmv:A (1.9) BS02 CL ? GO:0000439 ... G0RZ08 34426585
    609035 7bmw:A (1.9) BS01 CS ? GO:0000439 ... G0RZ08 34426585
    609036 7bmw:A (1.9) BS02 CS ? GO:0000439 ... G0RZ08 34426585
    609037 7bmw:A (1.9) BS03 CL ? GO:0000439 ... G0RZ08 34426585
    609038 7bmx:A (1.9) BS01 CS ? GO:0000439 ... G0RZ08 34426585
    609039 7bmx:A (1.9) BS02 CS ? GO:0000439 ... G0RZ08 34426585
    609040 7bmx:A (1.9) BS03 CL ? GO:0000439 ... G0RZ08 34426585
    609041 7bmy:A (1.8) BS01 CS ? GO:0000439 ... G0RZ08 34426585
    609042 7bmy:A (1.8) BS02 CL ? GO:0000439 ... G0RZ08 34426585
    609043 7bn1:A (1.97) BS01 peptide ? GO:0005198 ... Q00610 N/A
    609044 7bn1:B (1.97) BS01 peptide ? GO:0005198 ... Q00610 N/A
    609045 7bn2:AAA (1.965) BS01 peptide ? GO:0005198 ... Q00610 N/A
    609046 7bn2:BBB (1.965) BS01 peptide ? GO:0005198 ... Q00610 N/A
    609047 7bn3:A (1.93) BS01 peptide ? GO:0003723 ... P11940 N/A
    609048 7bn3:B (1.93) BS01 peptide ? GO:0003723 ... P11940 N/A
    609049 7bn3:C (1.93) BS01 peptide ? GO:0003723 ... P11940 N/A
    609050 7bn5:A (2.22) BS01 U4K 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609051 7bn6:A (1.5) BS01 U5N ? GO:0000166 ... M2XAQ9 N/A
    609052 7bn6:A (1.5) BS02 FMN ? GO:0000166 ... M2XAQ9 N/A
    609053 7bn6:B (1.5) BS01 FMN ? GO:0000166 ... M2XAQ9 N/A
    609054 7bn7:A (2.45) BS01 FMN 1.6.99.1 GO:0003959 ... Q03558 N/A
    609055 7bn7:B (2.45) BS01 FMN 1.6.99.1 GO:0003959 ... Q03558 N/A
    609056 7bn7:C (2.45) BS01 FMN 1.6.99.1 GO:0003959 ... Q03558 N/A
    609057 7bn7:D (2.45) BS01 FMN 1.6.99.1 GO:0003959 ... Q03558 N/A
    609058 7bn8:A (1.78) BS01 U4T 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609059 7bnb:A (1.16) BS01 U58 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609060 7bnc:A (1.86) BS01 U5B 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609061 7bnd:A (2.1) BS01 U5E 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609062 7bne:A (1.7) BS01 NCT 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609063 7bnf:A (1.45) BS01 U5H 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609064 7bng:A (1.47) BS01 GGB N/A N/A N/A N/A
    609065 7bnj:A (1.49) BS01 657 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609066 7bnk:A (1.9) BS01 TS6 ? GO:0003677 ... Q1CVJ4 34562373
    609067 7bnk:A (1.9) BS02 CDP ? GO:0003677 ... Q1CVJ4 34562373
    609068 7bnk:A (1.9) BS03 MG ? GO:0003677 ... Q1CVJ4 34562373
    609069 7bnk:A (1.9) BS04 CDP ? GO:0003677 ... Q1CVJ4 34562373
    609070 7bnk:B (1.9) BS01 CDP ? GO:0003677 ... Q1CVJ4 34562373
    609071 7bnk:B (1.9) BS02 TS6 ? GO:0003677 ... Q1CVJ4 34562373
    609072 7bnk:B (1.9) BS03 CDP ? GO:0003677 ... Q1CVJ4 34562373
    609073 7bnk:B (1.9) BS04 MG ? GO:0003677 ... Q1CVJ4 34562373
    609074 7bnl:A (1.23) BS01 U5T 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609075 7bnr:A (1.7) BS01 UFQ ? GO:0003677 ... Q1CVJ4 34562373
    609076 7bnr:A (1.7) BS02 MG ? GO:0003677 ... Q1CVJ4 34562373
    609077 7bnr:A (1.7) BS03 UFQ ? GO:0003677 ... Q1CVJ4 34562373
    609078 7bnr:B (1.7) BS01 UFQ ? GO:0003677 ... Q1CVJ4 34562373
    609079 7bnr:B (1.7) BS02 UFQ ? GO:0003677 ... Q1CVJ4 34562373
    609080 7bnr:B (1.7) BS03 MG ? GO:0003677 ... Q1CVJ4 34562373
    609081 7bns:A2 (2.7) BS01 peptide ? GO:0003677 ... Q9PTN2 35955580
    609082 7bns:A2 (2.7) BS02 U5W ? GO:0003677 ... Q9PTN2 35955580
    609083 7bnu:A2 (2.4) BS01 peptide ? GO:0003677 ... Q9PTN2 35955580
    609084 7bnu:A2 (2.4) BS02 U5W ? GO:0003677 ... Q9PTN2 35955580
    609085 7bo0:A (1.63) BS01 U6W ? GO:0000166 ... M2XAQ9 N/A
    609086 7bo0:A (1.63) BS02 FMN ? GO:0000166 ... M2XAQ9 N/A
    609087 7bo0:B (1.63) BS01 FMN ? GO:0000166 ... M2XAQ9 N/A
    609088 7bo1:A (1.4) BS01 U5Z 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609089 7bo1:A (1.4) BS02 U5Z 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609090 7bo2:A (1.21) BS01 U62 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609091 7bo3:A (2.2) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 35299116
    609092 7bo3:A (2.2) BS02 IA4 3.1.1.8 GO:0001540 ... P06276 35299116
    609093 7bo3:A (2.2) BS03 SIA 3.1.1.8 GO:0001540 ... P06276 35299116
    609094 7bo4:A (2.401) BS01 FUC 3.1.1.8 GO:0001540 ... P06276 35299116
    609095 7bo4:A (2.401) BS02 FUC 3.1.1.8 GO:0001540 ... P06276 35299116
    609096 7bo4:A (2.401) BS03 A87 3.1.1.8 GO:0001540 ... P06276 35299116
    609097 7bo4:A (2.401) BS04 SIA 3.1.1.8 GO:0001540 ... P06276 35299116
    609098 7bo5:A (1.38) BS01 U65 3.1.1.98 GO:0016787 ... Q6P988 N/A
    609099 7bo6:A (2.86) BS01 peptide ? GO:0003677 ... Q9PTN2 33853023
    609100 7bo6:A (2.86) BS02 FKC ? GO:0003677 ... Q9PTN2 33853023
    609101 7bo7:AAA (2.83) BS01 U6K 2.1.1.320 GO:0000387 ... O14744 N/A
    609102 7bo9:A (1.56) BS01 peptide N/A N/A N/A 33881308
    609103 7bo9:D (1.56) BS01 peptide N/A N/A N/A 33881308
    609104 7boc:A (2.55) BS01 peptide 2.1.1.320 GO:0016274 ... O14744 33624332
    609105 7bod:D (2.88) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609106 7bod:E (2.88) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609107 7bod:F (2.88) BS01 rna ? GO:0002181 ... P02358 34088665
    609108 7bod:H (2.88) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609109 7bod:K (2.88) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609110 7bod:L (2.88) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609111 7bod:O (2.88) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609112 7bod:P (2.88) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609113 7bod:Q (2.88) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609114 7bod:R (2.88) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609115 7bod:T (2.88) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609116 7bod:U (2.88) BS01 rna ? GO:0000028 ... P68679 34088665
    609117 7boe:B (2.9) BS01 rna ? GO:0000028 ... P0A7V0 34088665
    609118 7boe:B (2.9) BS02 ZN ? GO:0000028 ... P0A7V0 34088665
    609119 7boe:C (2.9) BS01 rna ? GO:0000028 ... P0A7V3 34088665
    609120 7boe:D (2.9) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609121 7boe:E (2.9) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609122 7boe:F (2.9) BS01 rna ? GO:0002181 ... P02358 34088665
    609123 7boe:G (2.9) BS01 rna ? GO:0000028 ... P02359 34088665
    609124 7boe:H (2.9) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609125 7boe:I (2.9) BS01 rna ? GO:0000049 ... P0A7X3 34088665
    609126 7boe:J (2.9) BS01 rna ? GO:0000049 ... P0A7R5 34088665
    609127 7boe:K (2.9) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609128 7boe:L (2.9) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609129 7boe:M (2.9) BS01 rna ? GO:0000049 ... P0A7S9 34088665
    609130 7boe:N (2.9) BS01 rna ? GO:0000028 ... P0AG59 34088665
    609131 7boe:O (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609132 7boe:P (2.9) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609133 7boe:Q (2.9) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609134 7boe:R (2.9) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609135 7boe:S (2.9) BS01 rna ? GO:0000028 ... P0A7U3 34088665
    609136 7boe:T (2.9) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609137 7boe:U (2.9) BS01 rna ? GO:0000028 ... P68679 34088665
    609138 7bof:D (2.92) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609139 7bof:E (2.92) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609140 7bof:F (2.92) BS01 rna ? GO:0002181 ... P02358 34088665
    609141 7bof:H (2.92) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609142 7bof:K (2.92) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609143 7bof:L (2.92) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609144 7bof:O (2.92) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609145 7bof:P (2.92) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609146 7bof:Q (2.92) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609147 7bof:R (2.92) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609148 7bof:T (2.92) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609149 7bog:D (2.75) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609150 7bog:E (2.75) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609151 7bog:F (2.75) BS01 rna ? GO:0002181 ... P02358 34088665
    609152 7bog:H (2.75) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609153 7bog:K (2.75) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609154 7bog:L (2.75) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609155 7bog:O (2.75) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609156 7bog:P (2.75) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609157 7bog:Q (2.75) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609158 7bog:R (2.75) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609159 7bog:T (2.75) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609160 7bog:V (2.75) BS01 rna ? GO:0005737 ... P0A7G2 34088665
    609161 7boh:B (2.82) BS01 rna ? GO:0000028 ... P0A7V0 34088665
    609162 7boh:B (2.82) BS02 ZN ? GO:0000028 ... P0A7V0 34088665
    609163 7boh:C (2.82) BS01 rna ? GO:0000028 ... P0A7V3 34088665
    609164 7boh:D (2.82) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609165 7boh:E (2.82) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609166 7boh:F (2.82) BS01 rna ? GO:0002181 ... P02358 34088665
    609167 7boh:G (2.82) BS01 rna ? GO:0000028 ... P02359 34088665
    609168 7boh:H (2.82) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609169 7boh:I (2.82) BS01 rna ? GO:0000049 ... P0A7X3 34088665
    609170 7boh:J (2.82) BS01 rna ? GO:0000049 ... P0A7R5 34088665
    609171 7boh:K (2.82) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609172 7boh:L (2.82) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609173 7boh:M (2.82) BS01 rna ? GO:0000049 ... P0A7S9 34088665
    609174 7boh:N (2.82) BS01 rna ? GO:0000028 ... P0AG59 34088665
    609175 7boh:O (2.82) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609176 7boh:P (2.82) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609177 7boh:Q (2.82) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609178 7boh:R (2.82) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609179 7boh:S (2.82) BS01 rna ? GO:0000028 ... P0A7U3 34088665
    609180 7boh:T (2.82) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609181 7boh:V (2.82) BS01 rna ? GO:0005737 ... P0A7G2 34088665
    609182 7boi:D (2.98) BS01 rna ? GO:0000028 ... P0A7V8 34088665
    609183 7boi:E (2.98) BS01 rna ? GO:0000028 ... P0A7W1 34088665
    609184 7boi:F (2.98) BS01 rna ? GO:0002181 ... P02358 34088665
    609185 7boi:H (2.98) BS01 rna ? GO:0000028 ... P0A7W7 34088665
    609186 7boi:K (2.98) BS01 rna ? GO:0002181 ... P0A7R9 34088665
    609187 7boi:L (2.98) BS01 rna ? GO:0000049 ... P0A7S3 34088665
    609188 7boi:O (2.98) BS01 rna ? GO:0000028 ... P0ADZ4 34088665
    609189 7boi:P (2.98) BS01 rna ? GO:0000028 ... P0A7T3 34088665
    609190 7boi:Q (2.98) BS01 rna ? GO:0000028 ... P0AG63 34088665
    609191 7boi:R (2.98) BS01 rna ? GO:0002181 ... P0A7T7 34088665
    609192 7boi:T (2.98) BS01 rna ? GO:0000028 ... P0A7U7 34088665
    609193 7boi:U (2.98) BS01 rna ? GO:0000028 ... P68679 34088665
    609194 7boi:W (2.98) BS01 rna 3.6.1.- GO:0000028 ... P39286 34088665
    609195 7boi:W (2.98) BS02 ZN 3.6.1.- GO:0000028 ... P39286 34088665
    609196 7boi:W (2.98) BS03 GNP 3.6.1.- GO:0000028 ... P39286 34088665
    609197 7boi:W (2.98) BS04 MG 3.6.1.- GO:0000028 ... P39286 34088665
    609198 7boi:W (2.98) BS05 MG 3.6.1.- GO:0000028 ... P39286 34088665
    609199 7bok:A (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951
    609200 7bok:B (3.7) BS01 HEM 1.11.1.7 GO:0004601 ... A0R4G9 33853951

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).