SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    609601 7btb:N (3.22) BS02 rna ? GO:0002181 ... P05748 33037216
    609602 7btb:O (3.22) BS01 rna ? GO:0000470 ... P26784 33037216
    609603 7btb:P (3.22) BS01 rna ? GO:0000448 ... P05740 33037216
    609604 7btb:P (3.22) BS02 rna ? GO:0000448 ... P05740 33037216
    609605 7btb:Q (3.22) BS01 rna ? GO:0002181 ... P0CX49 33037216
    609606 7btb:R (3.22) BS01 rna ? GO:0002181 ... P0CX82 33037216
    609607 7btb:S (3.22) BS01 rna ? GO:0002181 ... P0CX23 33037216
    609608 7btb:T (3.22) BS01 rna ? GO:0002181 ... Q02753 33037216
    609609 7btb:U (3.22) BS01 rna ? GO:0002181 ... P05749 33037216
    609610 7btb:V (3.22) BS01 rna ? GO:0002181 ... P0CX41 33037216
    609611 7btb:W (3.22) BS01 rna ? GO:0000027 ... P33201 33037216
    609612 7btb:X (3.22) BS01 rna ? GO:0000027 ... P04456 33037216
    609613 7btb:X (3.22) BS02 rna ? GO:0000027 ... P04456 33037216
    609614 7btb:Y (3.22) BS01 rna ? GO:0002181 ... P05743 33037216
    609615 7btb:Y (3.22) BS02 rna ? GO:0002181 ... P05743 33037216
    609616 7btb:Z (3.22) BS01 rna ? GO:0002181 ... P0C2H6 33037216
    609617 7btb:a (3.22) BS01 rna ? GO:0002181 ... P02406 33037216
    609618 7btb:b (3.22) BS01 rna ? GO:0000054 ... Q02892 33037216
    609619 7btb:b (3.22) BS02 GTP ? GO:0000054 ... Q02892 33037216
    609620 7btb:b (3.22) BS03 MG ? GO:0000054 ... Q02892 33037216
    609621 7btb:c (3.22) BS01 rna ? GO:0002181 ... P14120 33037216
    609622 7btb:d (3.22) BS01 rna ? GO:0002181 ... P0C2H8 33037216
    609623 7btb:e (3.22) BS01 rna ? GO:0002181 ... P38061 33037216
    609624 7btb:f (3.22) BS01 rna ? GO:0000027 ... P05744 33037216
    609625 7btb:g (3.22) BS01 rna ? GO:0002181 ... P87262 33037216
    609626 7btb:h (3.22) BS01 rna ? GO:0000463 ... P0CX84 33037216
    609627 7btb:h (3.22) BS02 rna ? GO:0000463 ... P0CX84 33037216
    609628 7btb:i (3.22) BS01 rna ? GO:0002181 ... P05745 33037216
    609629 7btb:j (3.22) BS01 rna ? GO:0000448 ... P49166 33037216
    609630 7btb:j (3.22) BS02 rna ? GO:0000448 ... P49166 33037216
    609631 7btb:j (3.22) BS03 ZN ? GO:0000448 ... P49166 33037216
    609632 7btb:k (3.22) BS01 rna ? GO:0002181 ... P49167 33037216
    609633 7btb:m (3.22) BS01 rna ? GO:0000055 ... P53742 33037216
    609634 7btb:m (3.22) BS02 GTP ? GO:0000055 ... P53742 33037216
    609635 7btb:m (3.22) BS03 MG ? GO:0000055 ... P53742 33037216
    609636 7btb:n (3.22) BS01 rna ? GO:0000462 ... P53261 33037216
    609637 7btb:n (3.22) BS02 rna ? GO:0000462 ... P53261 33037216
    609638 7btb:o (3.22) BS01 rna ? GO:0000463 ... P53927 33037216
    609639 7btb:p (3.22) BS01 rna ? GO:0002181 ... P0CX25 33037216
    609640 7btb:p (3.22) BS02 ZN ? GO:0002181 ... P0CX25 33037216
    609641 7btb:q (3.22) BS01 rna ? GO:0000027 ... Q12080 33037216
    609642 7btb:q (3.22) BS02 rna ? GO:0000027 ... Q12080 33037216
    609643 7btb:r (3.22) BS01 rna ? GO:0000460 ... P40078 33037216
    609644 7btb:t (3.22) BS01 rna ? GO:0000463 ... P40693 33037216
    609645 7btb:t (3.22) BS02 rna ? GO:0000463 ... P40693 33037216
    609646 7btb:t (3.22) BS03 rna ? GO:0000463 ... P40693 33037216
    609647 7btb:u (3.22) BS01 rna ? GO:0001671 ... Q07915 33037216
    609648 7btb:v (3.22) BS01 rna ? GO:0000027 ... P36160 33037216
    609649 7btb:v (3.22) BS02 rna ? GO:0000027 ... P36160 33037216
    609650 7btb:w (3.22) BS01 rna ? GO:0000055 ... Q08746 33037216
    609651 7btb:y (3.22) BS01 rna ? GO:0000054 ... Q12522 33037216
    609652 7btb:z (3.22) BS01 rna ? GO:0003674 ... P38202 33037216
    609653 7btc:A (2.101) BS01 GDP 3.6.5.- GO:0000139 ... Q15382 32470140
    609654 7btc:B (2.101) BS01 GDP 3.6.5.- GO:0000139 ... Q15382 32470140
    609655 7btc:C (2.101) BS01 GDP 3.6.5.- GO:0000139 ... Q15382 32470140
    609656 7btc:D (2.101) BS01 GDP 3.6.5.- GO:0000139 ... Q15382 32470140
    609657 7btd:A (2.0) BS01 MG 3.6.5.- GO:0000139 ... Q15382 32470140
    609658 7btd:A (2.0) BS02 GNP 3.6.5.- GO:0000139 ... Q15382 32470140
    609659 7bte:A (4.2) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609660 7bte:A (4.2) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609661 7bte:C (4.2) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609662 7bte:C (4.2) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609663 7bte:E (4.2) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609664 7bte:E (4.2) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609665 7bte:G (4.2) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609666 7bte:G (4.2) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609667 7bte:I (4.2) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609668 7bte:I (4.2) BS02 MG 3.6.4.- GO:0001725 ... P68139 32567727
    609669 7bte:I (4.2) BS03 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609670 7btf:A (2.95) BS01 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0DTD1 32277040
    609671 7bti:A (3.6) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609672 7bti:A (3.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609673 7bti:B (3.6) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609674 7bti:B (3.6) BS02 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609675 7bti:B (3.6) BS03 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609676 7bti:C (3.6) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609677 7bti:C (3.6) BS02 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609678 7bti:C (3.6) BS03 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609679 7bti:D (3.6) BS01 peptide 3.6.4.- GO:0001725 ... P68139 32567727
    609680 7bti:D (3.6) BS02 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609681 7bti:E (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 32567727
    609682 7btj:A (2.373) BS01 NAD N/A GO:0016491 ... N/A N/A
    609683 7btj:A (2.373) BS02 FDA N/A GO:0016491 ... N/A N/A
    609684 7btj:B (2.373) BS01 NAD N/A GO:0016491 ... N/A N/A
    609685 7btj:B (2.373) BS02 FDA N/A GO:0016491 ... N/A N/A
    609686 7btj:C (2.373) BS01 NAD N/A GO:0016491 ... N/A N/A
    609687 7btj:C (2.373) BS02 FDA N/A GO:0016491 ... N/A N/A
    609688 7btj:D (2.373) BS01 NAD N/A GO:0016491 ... N/A N/A
    609689 7btj:D (2.373) BS02 FDA N/A GO:0016491 ... N/A N/A
    609690 7btk:A (2.7) BS01 F6L 3.2.1.23 GO:0000287 ... P00722 33624914
    609691 7btk:A (2.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609692 7btk:A (2.7) BS03 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609693 7btk:B (2.7) BS01 F6L 3.2.1.23 GO:0000287 ... P00722 33624914
    609694 7btk:B (2.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609695 7btk:C (2.7) BS01 F6L 3.2.1.23 GO:0000287 ... P00722 33624914
    609696 7btk:C (2.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609697 7btk:C (2.7) BS03 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609698 7btk:D (2.7) BS01 F6L 3.2.1.23 GO:0000287 ... P00722 33624914
    609699 7btk:D (2.7) BS02 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609700 7btk:D (2.7) BS03 MG 3.2.1.23 GO:0000287 ... P00722 33624914
    609701 7btl:A (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609702 7btl:B (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609703 7btl:C (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609704 7btl:D (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609705 7btl:E (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609706 7btl:F (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609707 7btl:G (2.25) BS01 MAN ? N/A D7DTD6 32651948
    609708 7btn:A (2.382) BS01 MG 3.6.1.1 GO:0000287 ... Q15181 33036755
    609709 7btn:A (2.382) BS02 MG 3.6.1.1 GO:0000287 ... Q15181 33036755
    609710 7btq:A (4.54) BS01 dna 2.1.1.72 GO:0003676 ... P10484 32483229
    609711 7btq:D (4.54) BS01 dna 2.1.1.72 GO:0003676 ... P10484 32483229
    609712 7btq:E (4.54) BS01 dna ? GO:0003677 ... P10485 32483229
    609713 7btq:E (4.54) BS02 dna ? GO:0003677 ... P10485 32483229
    609714 7bts:A (3.13) BS01 ALE 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609715 7bts:A (3.13) BS02 CLR 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609716 7bts:A (3.13) BS03 1WV 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609717 7btt:A (1.86) BS01 F8R 2.7.10.1 GO:0004672 ... Q9UM73 N/A
    609718 7btv:A (2.0) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609719 7btv:A (2.0) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609720 7btv:A (2.0) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609721 7btv:A (2.0) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609722 7btv:A (2.0) BS05 SAM 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609723 7btv:A (2.0) BS06 N47 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218 MOAD: ic50=16.9nM
    609724 7btv:B (2.0) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609725 7btv:B (2.0) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609726 7btv:B (2.0) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609727 7btv:B (2.0) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609728 7btv:B (2.0) BS05 SAM 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609729 7btv:B (2.0) BS06 N47 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218 MOAD: ic50=16.9nM
    609730 7btz:A (2.4) BS01 SAH 2.1.1.- GO:0008168 ... Q9RPT0 N/A
    609731 7btz:B (2.4) BS01 SAH 2.1.1.- GO:0008168 ... Q9RPT0 N/A
    609732 7bu0:A (2.43) BS01 AYE ? N/A Q5ZSI8 33136002
    609733 7bu0:B (2.43) BS01 AYE ? N/A Q5ZSI8 33136002
    609734 7bu1:A (2.49) BS01 SAM 2.1.1.- GO:0008168 ... Q9RPT0 N/A
    609735 7bu1:B (2.49) BS01 SAM 2.1.1.- GO:0008168 ... Q9RPT0 N/A
    609736 7bu2:A (1.553) BS01 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609737 7bu2:A (1.553) BS02 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609738 7bu2:B (1.553) BS01 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609739 7bu2:B (1.553) BS02 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609740 7bu3:A (2.0) BS01 ASP 1.1.1.2 GO:0006631 ... P27250 32455802
    609741 7bu3:A (2.0) BS02 NAP 1.1.1.2 GO:0006631 ... P27250 32455802
    609742 7bu3:A (2.0) BS03 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609743 7bu3:A (2.0) BS04 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609744 7bu3:B (2.0) BS01 NAP 1.1.1.2 GO:0006631 ... P27250 32455802
    609745 7bu3:B (2.0) BS02 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609746 7bu3:B (2.0) BS03 ZN 1.1.1.2 GO:0006631 ... P27250 32455802
    609747 7bu4:A (1.70227) BS01 Y49 2.7.11.1 GO:0004672 ... P68400 N/A
    609748 7bu5:A (1.8) BS01 GLY 3.1.22.- GO:0006302 ... Q96NY9 N/A
    609749 7bu6:A (2.7) BS01 GLC 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609750 7bu6:A (2.7) BS02 GLC 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609751 7bu6:A (2.7) BS03 E5E 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609752 7bu6:A (2.7) BS04 480 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609753 7bu6:A (2.7) BS05 CLR 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609754 7bu7:A (2.6) BS01 GLC 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609755 7bu7:A (2.6) BS02 GLC 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609756 7bu7:A (2.6) BS03 P0G 3.2.1.17 GO:0003796 ... D9IEF7
    P08588
    33093660
    609757 7bu9:A (3.502) BS01 peptide ? GO:0007276 ... Q9Y657 32994220
    609758 7bu9:C (3.502) BS01 peptide ? GO:0007276 ... Q9Y657 32994220
    609759 7bu9:E (3.502) BS01 peptide ? GO:0007276 ... Q9Y657 32994220
    609760 7bu9:G (3.502) BS01 peptide ? GO:0007276 ... Q9Y657 32994220
    609761 7buc:A (2.6) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609762 7buc:A (2.6) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609763 7buc:A (2.6) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609764 7buc:A (2.6) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609765 7buc:A (2.6) BS05 SAM 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609766 7buc:A (2.6) BS06 F80 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609767 7buc:B (2.6) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609768 7buc:B (2.6) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609769 7buc:B (2.6) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609770 7buc:B (2.6) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609771 7buc:B (2.6) BS05 SAM 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609772 7buc:B (2.6) BS06 F80 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 32781218
    609773 7bug:A (1.6) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609774 7bug:A (1.6) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609775 7bug:A (1.6) BS03 MXE ? GO:0016491 ... Q84II6 N/A
    609776 7bug:B (1.6) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609777 7bug:B (1.6) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609778 7bug:B (1.6) BS03 CO3 ? GO:0016491 ... Q84II6 N/A
    609779 7bug:C (1.6) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609780 7bug:C (1.6) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609781 7bug:C (1.6) BS03 MXE ? GO:0016491 ... Q84II6 N/A
    609782 7buh:A (1.79) BS01 FES ? GO:0008901 ... Q8GI16 N/A
    609783 7bui:A (2.15) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609784 7bui:A (2.15) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609785 7bui:B (2.15) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609786 7bui:B (2.15) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609787 7bui:C (2.15) BS01 FES ? GO:0016491 ... Q84II6 N/A
    609788 7bui:C (2.15) BS02 FE2 ? GO:0016491 ... Q84II6 N/A
    609789 7bui:D (2.15) BS01 FES ? GO:0008901 ... Q8GI16 N/A
    609790 7bui:E (2.15) BS01 FES ? GO:0008901 ... Q8GI16 N/A
    609791 7buj:A (2.13) BS01 ZN 2.7.7.86 N/A Q8C6L5 32814054
    609792 7buj:A (2.13) BS02 GTP 2.7.7.86 N/A Q8C6L5 32814054
    609793 7buj:A (2.13) BS03 5GP 2.7.7.86 N/A Q8C6L5 32814054
    609794 7buj:B (2.13) BS01 ZN 2.7.7.86 N/A Q8C6L5 32814054
    609795 7buj:B (2.13) BS02 GTP 2.7.7.86 N/A Q8C6L5 32814054
    609796 7buj:B (2.13) BS03 5GP 2.7.7.86 N/A Q8C6L5 32814054
    609797 7buk:A (2.644) BS01 ZN 3.1.1.3 GO:0004806 ... Q842J9 34061877
    609798 7buk:A (2.644) BS02 CA 3.1.1.3 GO:0004806 ... Q842J9 34061877
    609799 7buk:B (2.644) BS01 ZN 3.1.1.3 GO:0004806 ... Q842J9 34061877
    609800 7buk:B (2.644) BS02 CA 3.1.1.3 GO:0004806 ... Q842J9 34061877

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).