SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    610601 7c3u:A (1.86) BS02 AZG ? GO:0003824 ... Q82Y41 34010666
    610602 7c3u:B (1.86) BS01 ZN ? GO:0003824 ... Q82Y41 34010666
    610603 7c3u:B (1.86) BS02 AZG ? GO:0003824 ... Q82Y41 34010666
    610604 7c3v:A (2.20043) BS01 NAP ? GO:0000166 ... A0A1B0UHJ2 N/A
    610605 7c3y:A (1.632) BS01 NUT ? GO:0005634 ... O15151 N/A BindingDB: IC50=>10000nM
    610606 7c40:A (2.516) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 32486141
    610607 7c41:A (2.276) BS01 peptide 3.6.5.2 GO:0003924 ... P01116 32486141
    610608 7c41:A (2.276) BS02 GDP 3.6.5.2 GO:0003924 ... P01116 32486141
    610609 7c41:A (2.276) BS03 MG 3.6.5.2 GO:0003924 ... P01116 32486141
    610610 7c41:G (2.276) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 32486141
    610611 7c41:G (2.276) BS02 MG 3.6.5.2 GO:0003924 ... P01116 32486141
    610612 7c41:J (2.276) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 32486141
    610613 7c41:M (2.276) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 32486141
    610614 7c42:A (2.0) BS01 ZN ? GO:0000166 ... Q38DE2 33332555
    610615 7c42:A (2.0) BS02 ZN ? GO:0000166 ... Q38DE2 33332555
    610616 7c43:A (2.3) BS01 ZN ? GO:0000166 ... Q38DE2 33332555
    610617 7c43:A (2.3) BS02 ZN ? GO:0000166 ... Q38DE2 33332555
    610618 7c43:A (2.3) BS03 MN ? GO:0000166 ... Q38DE2 33332555
    610619 7c43:A (2.3) BS04 AMP ? GO:0000166 ... Q38DE2 33332555
    610620 7c44:A (1.65) BS01 NUT ? GO:0005634 ... O15151 N/A BindingDB: IC50=>10000nM
    610621 7c44:A (1.65) BS02 O4B ? GO:0005634 ... O15151 N/A
    610622 7c45:A (1.769) BS01 rna ? GO:0003676 ... Q38DE2 33332555
    610623 7c45:A (1.769) BS02 ZN ? GO:0003676 ... Q38DE2 33332555
    610624 7c45:A (1.769) BS03 ZN ? GO:0003676 ... Q38DE2 33332555
    610625 7c45:A (1.769) BS04 CA ? GO:0003676 ... Q38DE2 33332555
    610626 7c47:A (2.2) BS01 ZN ? GO:0000166 ... Q38DE2 33332555
    610627 7c47:A (2.2) BS02 ZN ? GO:0000166 ... Q38DE2 33332555
    610628 7c47:A (2.2) BS03 C ? GO:0000166 ... Q38DE2 33332555
    610629 7c47:A (2.2) BS04 C ? GO:0000166 ... Q38DE2 33332555
    610630 7c47:A (2.2) BS05 MN ? GO:0000166 ... Q38DE2 33332555
    610631 7c47:A (2.2) BS06 MN ? GO:0000166 ... Q38DE2 33332555
    610632 7c49:A (2.25) BS01 FAD 1.4.2.2 GO:0016491 ... F8G0P2 32873764
    610633 7c49:A (2.25) BS02 HNL 1.4.2.2 GO:0016491 ... F8G0P2 32873764
    610634 7c49:B (2.25) BS01 FAD 1.4.2.2 GO:0016491 ... F8G0P2 32873764
    610635 7c49:B (2.25) BS02 HNL 1.4.2.2 GO:0016491 ... F8G0P2 32873764
    610636 7c4a:A (2.05) BS01 FAD 1.4.2.2 GO:0000166 ... F8G0P2 32873764
    610637 7c4a:B (2.05) BS01 FAD 1.4.2.2 GO:0000166 ... F8G0P2 32873764
    610638 7c4b:A (2.101) BS01 ZN ? GO:0000166 ... Q38DE2 33332555
    610639 7c4b:A (2.101) BS02 ZN ? GO:0000166 ... Q38DE2 33332555
    610640 7c4b:A (2.101) BS03 MN ? GO:0000166 ... Q38DE2 33332555
    610641 7c4b:A (2.101) BS04 MN ? GO:0000166 ... Q38DE2 33332555
    610642 7c4b:A (2.101) BS05 U ? GO:0000166 ... Q38DE2 33332555
    610643 7c4c:A (2.265) BS01 ZN ? GO:0000166 ... Q38DE2 33332555
    610644 7c4c:A (2.265) BS02 ZN ? GO:0000166 ... Q38DE2 33332555
    610645 7c4c:A (2.265) BS03 ZN ? GO:0000166 ... Q38DE2 33332555
    610646 7c4c:A (2.265) BS04 ZN ? GO:0000166 ... Q38DE2 33332555
    610647 7c4c:A (2.265) BS05 ZN ? GO:0000166 ... Q38DE2 33332555
    610648 7c4c:A (2.265) BS06 ZN ? GO:0000166 ... Q38DE2 33332555
    610649 7c4c:A (2.265) BS07 MN ? GO:0000166 ... Q38DE2 33332555
    610650 7c4c:A (2.265) BS08 MN ? GO:0000166 ... Q38DE2 33332555
    610651 7c4c:A (2.265) BS09 MN ? GO:0000166 ... Q38DE2 33332555
    610652 7c4c:A (2.265) BS10 5GP ? GO:0000166 ... Q38DE2 33332555
    610653 7c4c:A (2.265) BS11 5GP ? GO:0000166 ... Q38DE2 33332555
    610654 7c4c:A (2.265) BS12 5GP ? GO:0000166 ... Q38DE2 33332555
    610655 7c4c:A (2.265) BS13 5GP ? GO:0000166 ... Q38DE2 33332555
    610656 7c4d:A (2.03) BS01 ACT ? GO:0016787 ... A0A2S1GUX0 33445864
    610657 7c4k:A (2.4) BS01 FAD N/A GO:0016491 ... N/A N/A
    610658 7c4l:A (2.6) BS01 FAD N/A GO:0016491 ... N/A N/A
    610659 7c4l:A (2.6) BS02 GLN N/A GO:0016491 ... N/A N/A
    610660 7c4m:A (2.4) BS01 FAD N/A GO:0016491 ... N/A N/A
    610661 7c4m:A (2.4) BS02 TRP N/A GO:0016491 ... N/A N/A
    610662 7c4n:A (2.2) BS01 FAD N/A GO:0016491 ... N/A N/A
    610663 7c4n:A (2.2) BS02 PHE N/A GO:0016491 ... N/A N/A
    610664 7c4p:A (1.995) BS01 dna ? GO:0000723 ... Q8JGS4 N/A
    610665 7c4p:A (1.995) BS02 dna ? GO:0000723 ... Q8JGS4 N/A
    610666 7c4p:B (1.995) BS01 dna ? GO:0000723 ... Q4FZZ9 N/A
    610667 7c4p:B (1.995) BS02 dna ? GO:0000723 ... Q4FZZ9 N/A
    610668 7c4q:A (2.5) BS01 dna ? GO:0000723 ... Q4FZZ9 N/A
    610669 7c4q:A (2.5) BS02 dna ? GO:0000723 ... Q4FZZ9 N/A
    610670 7c4q:B (2.5) BS01 dna ? GO:0000723 ... Q4FZZ9 N/A
    610671 7c4q:B (2.5) BS02 dna ? GO:0000723 ... Q4FZZ9 N/A
    610672 7c4r:A (2.44) BS01 dna ? GO:0000723 ... Q4FZZ9 N/A
    610673 7c4r:A (2.44) BS02 dna ? GO:0000723 ... Q4FZZ9 N/A
    610674 7c4r:B (2.44) BS01 dna ? GO:0000723 ... Q4FZZ9 N/A
    610675 7c4r:B (2.44) BS02 dna ? GO:0000723 ... Q4FZZ9 N/A
    610676 7c4s:A (3.2) BS01 S1P ? GO:0003376 ... Q99500 34108205 BindingDB: EC50=1.2nM, IC50=0.66nM
    610677 7c4s:B (3.2) BS01 S1P ? GO:0003376 ... Q99500 34108205 BindingDB: EC50=1.2nM, IC50=0.66nM
    610678 7c52:0 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610679 7c52:0 (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610680 7c52:0 (2.89) BS03 CRT ? GO:0005515 ... D2Z0P1 33597527
    610681 7c52:1 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P2 33597527
    610682 7c52:1 (2.89) BS02 CA ? GO:0005515 ... D2Z0P2 33597527
    610683 7c52:1 (2.89) BS03 CRT ? GO:0005515 ... D2Z0P2 33597527
    610684 7c52:1 (2.89) BS04 BCL ? GO:0005515 ... D2Z0P2 33597527
    610685 7c52:1 (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610686 7c52:2 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610687 7c52:2 (2.89) BS02 CRT ? GO:0005515 ... D2Z0P1 33597527
    610688 7c52:2 (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527
    610689 7c52:3 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P2 33597527
    610690 7c52:3 (2.89) BS02 CA ? GO:0005515 ... D2Z0P2 33597527
    610691 7c52:3 (2.89) BS03 CRT ? GO:0005515 ... D2Z0P2 33597527
    610692 7c52:3 (2.89) BS04 CRT ? GO:0005515 ... D2Z0P2 33597527
    610693 7c52:3 (2.89) BS05 BCL ? GO:0005515 ... D2Z0P2 33597527
    610694 7c52:4 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610695 7c52:4 (2.89) BS02 CRT ? GO:0005515 ... D2Z0P1 33597527
    610696 7c52:4 (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527
    610697 7c52:5 (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610698 7c52:5 (2.89) BS02 BCL ? GO:0005515 ... D2Z0P2 33597527
    610699 7c52:5 (2.89) BS03 CA ? GO:0005515 ... D2Z0P2 33597527
    610700 7c52:5 (2.89) BS04 BCL ? GO:0005515 ... D2Z0P2 33597527
    610701 7c52:5 (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610702 7c52:6 (2.89) BS01 CRT ? GO:0005515 ... D2Z0P1 33597527
    610703 7c52:6 (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610704 7c52:6 (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527
    610705 7c52:7 (2.89) BS01 UQ8 ? GO:0005515 ... D2Z0P2 33597527
    610706 7c52:7 (2.89) BS02 UQ8 ? GO:0005515 ... D2Z0P2 33597527
    610707 7c52:7 (2.89) BS03 CRT ? GO:0005515 ... D2Z0P2 33597527
    610708 7c52:7 (2.89) BS04 BCL ? GO:0005515 ... D2Z0P2 33597527
    610709 7c52:7 (2.89) BS05 CA ? GO:0005515 ... D2Z0P2 33597527
    610710 7c52:7 (2.89) BS06 BCL ? GO:0005515 ... D2Z0P2 33597527
    610711 7c52:7 (2.89) BS07 CRT ? GO:0005515 ... D2Z0P2 33597527
    610712 7c52:7 (2.89) BS08 CRT ? GO:0005515 ... D2Z0P2 33597527
    610713 7c52:8 (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610714 7c52:8 (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610715 7c52:8 (2.89) BS03 CRT ? GO:0005515 ... D2Z0P1 33597527
    610716 7c52:9 (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610717 7c52:9 (2.89) BS02 CRT ? GO:0005515 ... D2Z0P2 33597527
    610718 7c52:9 (2.89) BS03 BCL ? GO:0005515 ... D2Z0P2 33597527
    610719 7c52:9 (2.89) BS04 CA ? GO:0005515 ... D2Z0P2 33597527
    610720 7c52:9 (2.89) BS05 BCL ? GO:0005515 ... D2Z0P2 33597527
    610721 7c52:A (2.89) BS01 BCL ? GO:0005515 ... D2Z0P2 33597527
    610722 7c52:A (2.89) BS02 CA ? GO:0005515 ... D2Z0P2 33597527
    610723 7c52:A (2.89) BS03 BCL ? GO:0005515 ... D2Z0P2 33597527
    610724 7c52:A (2.89) BS04 CRT ? GO:0005515 ... D2Z0P2 33597527
    610725 7c52:A (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610726 7c52:A (2.89) BS06 CRT ? GO:0005515 ... D2Z0P2 33597527
    610727 7c52:B (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610728 7c52:B (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610729 7c52:B (2.89) BS03 CRT ? GO:0005515 ... D2Z0P1 33597527
    610730 7c52:C (2.89) BS01 HEM ? GO:0005506 ... D2Z0P5 33597527
    610731 7c52:C (2.89) BS02 HEM ? GO:0005506 ... D2Z0P5 33597527
    610732 7c52:C (2.89) BS03 HEM ? GO:0005506 ... D2Z0P5 33597527
    610733 7c52:C (2.89) BS04 HEM ? GO:0005506 ... D2Z0P5 33597527
    610734 7c52:C (2.89) BS05 CA ? GO:0005506 ... D2Z0P5 33597527
    610735 7c52:D (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610736 7c52:D (2.89) BS02 CRT ? GO:0005515 ... D2Z0P2 33597527
    610737 7c52:D (2.89) BS03 BCL ? GO:0005515 ... D2Z0P2 33597527
    610738 7c52:D (2.89) BS04 CA ? GO:0005515 ... D2Z0P2 33597527
    610739 7c52:D (2.89) BS05 BCL ? GO:0005515 ... D2Z0P2 33597527
    610740 7c52:D (2.89) BS06 CRT ? GO:0005515 ... D2Z0P2 33597527
    610741 7c52:E (2.89) BS01 CRT ? GO:0005515 ... D2Z0P1 33597527
    610742 7c52:E (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610743 7c52:E (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527
    610744 7c52:F (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610745 7c52:F (2.89) BS02 BCL ? GO:0005515 ... D2Z0P2 33597527
    610746 7c52:F (2.89) BS03 CA ? GO:0005515 ... D2Z0P2 33597527
    610747 7c52:F (2.89) BS04 BCL ? GO:0005515 ... D2Z0P2 33597527
    610748 7c52:F (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610749 7c52:F (2.89) BS06 CRT ? GO:0005515 ... D2Z0P2 33597527
    610750 7c52:G (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610751 7c52:G (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610752 7c52:G (2.89) BS03 CRT ? GO:0005515 ... D2Z0P1 33597527
    610753 7c52:I (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610754 7c52:I (2.89) BS02 BCL ? GO:0005515 ... D2Z0P2 33597527
    610755 7c52:I (2.89) BS03 CA ? GO:0005515 ... D2Z0P2 33597527
    610756 7c52:I (2.89) BS04 CRT ? GO:0005515 ... D2Z0P2 33597527
    610757 7c52:I (2.89) BS05 BCL ? GO:0005515 ... D2Z0P2 33597527
    610758 7c52:I (2.89) BS06 CRT ? GO:0005515 ... D2Z0P2 33597527
    610759 7c52:J (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610760 7c52:J (2.89) BS02 CRT ? GO:0005515 ... D2Z0P1 33597527
    610761 7c52:J (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527
    610762 7c52:K (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610763 7c52:K (2.89) BS02 BCL ? GO:0005515 ... D2Z0P2 33597527
    610764 7c52:K (2.89) BS03 CA ? GO:0005515 ... D2Z0P2 33597527
    610765 7c52:K (2.89) BS04 BCL ? GO:0005515 ... D2Z0P2 33597527
    610766 7c52:K (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610767 7c52:K (2.89) BS06 CRT ? GO:0005515 ... D2Z0P2 33597527
    610768 7c52:L (2.89) BS01 BCL ? GO:0005515 ... D2Z0P3 33597527
    610769 7c52:L (2.89) BS02 BCL ? GO:0005515 ... D2Z0P3 33597527
    610770 7c52:L (2.89) BS03 BPH ? GO:0005515 ... D2Z0P3 33597527
    610771 7c52:L (2.89) BS04 UQ8 ? GO:0005515 ... D2Z0P3 33597527
    610772 7c52:L (2.89) BS05 BCL ? GO:0005515 ... D2Z0P3 33597527
    610773 7c52:L (2.89) BS06 UQ8 ? GO:0005515 ... D2Z0P3 33597527
    610774 7c52:L (2.89) BS07 UQ8 ? GO:0005515 ... D2Z0P3 33597527
    610775 7c52:L (2.89) BS08 UQ8 ? GO:0005515 ... D2Z0P3 33597527
    610776 7c52:L (2.89) BS09 BPH ? GO:0005515 ... D2Z0P3 33597527
    610777 7c52:L (2.89) BS10 FE ? GO:0005515 ... D2Z0P3 33597527
    610778 7c52:L (2.89) BS11 MQ8 ? GO:0005515 ... D2Z0P3 33597527
    610779 7c52:M (2.89) BS01 BCL ? GO:0005515 ... A8ASG6 33597527
    610780 7c52:M (2.89) BS02 BPH ? GO:0005515 ... A8ASG6 33597527
    610781 7c52:M (2.89) BS03 BCL ? GO:0005515 ... A8ASG6 33597527
    610782 7c52:M (2.89) BS04 UQ8 ? GO:0005515 ... A8ASG6 33597527
    610783 7c52:M (2.89) BS05 BCL ? GO:0005515 ... A8ASG6 33597527
    610784 7c52:M (2.89) BS06 BPH ? GO:0005515 ... A8ASG6 33597527
    610785 7c52:M (2.89) BS07 FE ? GO:0005515 ... A8ASG6 33597527
    610786 7c52:M (2.89) BS08 MQ8 ? GO:0005515 ... A8ASG6 33597527
    610787 7c52:M (2.89) BS09 CRT ? GO:0005515 ... A8ASG6 33597527
    610788 7c52:M (2.89) BS10 UQ8 ? GO:0005515 ... A8ASG6 33597527
    610789 7c52:N (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610790 7c52:N (2.89) BS02 BCL ? GO:0005515 ... D2Z0P1 33597527
    610791 7c52:N (2.89) BS03 CRT ? GO:0005515 ... D2Z0P1 33597527
    610792 7c52:O (2.89) BS01 CRT ? GO:0005515 ... D2Z0P2 33597527
    610793 7c52:O (2.89) BS02 BCL ? GO:0005515 ... D2Z0P2 33597527
    610794 7c52:O (2.89) BS03 CA ? GO:0005515 ... D2Z0P2 33597527
    610795 7c52:O (2.89) BS04 CRT ? GO:0005515 ... D2Z0P2 33597527
    610796 7c52:O (2.89) BS05 CRT ? GO:0005515 ... D2Z0P2 33597527
    610797 7c52:O (2.89) BS06 BCL ? GO:0005515 ... D2Z0P2 33597527
    610798 7c52:P (2.89) BS01 BCL ? GO:0005515 ... D2Z0P1 33597527
    610799 7c52:P (2.89) BS02 CRT ? GO:0005515 ... D2Z0P1 33597527
    610800 7c52:P (2.89) BS03 BCL ? GO:0005515 ... D2Z0P1 33597527

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).