SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    613801 7cpd:D (2.506) BS01 G9U ? GO:0000226 ... Q6B856 N/A
    613802 7cpd:D (2.506) BS02 GDP ? GO:0000226 ... Q6B856 N/A
    613803 7cph:A (2.3) BS01 ZN 3.5.4.33 GO:0002100 ... P21335 34037063
    613804 7cph:B (2.3) BS01 ZN 3.5.4.33 GO:0002100 ... P21335 34037063
    613805 7cpi:A (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613806 7cpi:A (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613807 7cpi:B (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613808 7cpi:B (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613809 7cpi:C (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613810 7cpi:C (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613811 7cpi:D (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613812 7cpi:D (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613813 7cpi:E (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613814 7cpi:E (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613815 7cpi:F (2.602) BS01 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613816 7cpi:F (2.602) BS02 FE 1.16.3.1 GO:0004322 ... T2B7E1 33197176
    613817 7cpj:0 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613818 7cpj:1 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613819 7cpj:2 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613820 7cpj:3 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613821 7cpj:4 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613822 7cpj:5 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613823 7cpj:6 (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613824 7cpj:C (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613825 7cpj:C (3.3) BS02 rna N/A GO:0003723 ... N/A 34906996
    613826 7cpj:D (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613827 7cpj:E (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613828 7cpj:F (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613829 7cpj:F (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613830 7cpj:F (3.3) BS03 rna N/A GO:0003735 ... N/A 34906996
    613831 7cpj:G (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613832 7cpj:H (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613833 7cpj:I (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613834 7cpj:J (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613835 7cpj:K (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613836 7cpj:K (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613837 7cpj:L (3.3) BS01 rna ? GO:0003735 ... A0A037Y8L6 34906996
    613838 7cpj:M (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613839 7cpj:M (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613840 7cpj:N (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613841 7cpj:O (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613842 7cpj:O (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613843 7cpj:P (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613844 7cpj:P (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613845 7cpj:Q (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613846 7cpj:R (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613847 7cpj:S (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613848 7cpj:T (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613849 7cpj:U (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613850 7cpj:V (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613851 7cpj:W (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613852 7cpj:W (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613853 7cpj:X (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613854 7cpj:Y (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613855 7cpj:Z (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613856 7cpj:Z (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613857 7cpj:b (3.3) BS01 rna ? GO:0003735 ... C3TPN2 34906996
    613858 7cpj:c (3.3) BS01 rna N/A GO:0003676 ... N/A 34906996
    613859 7cpj:d (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613860 7cpj:e (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613861 7cpj:f (3.3) BS01 rna ? GO:0002181 ... P02358 34906996
    613862 7cpj:g (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613863 7cpj:h (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613864 7cpj:i (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613865 7cpj:j (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613866 7cpj:k (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613867 7cpj:l (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613868 7cpj:m (3.3) BS01 rna ? GO:0000049 ... A0A0H3ML81 34906996
    613869 7cpj:n (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613870 7cpj:o (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613871 7cpj:o (3.3) BS02 rna N/A GO:0003735 ... N/A 34906996
    613872 7cpj:p (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613873 7cpj:q (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613874 7cpj:r (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613875 7cpj:s (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613876 7cpj:t (3.3) BS01 rna N/A GO:0003723 ... N/A 34906996
    613877 7cpj:u (3.3) BS01 rna N/A GO:0003735 ... N/A 34906996
    613878 7cpk:A (1.6) BS01 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613879 7cpk:A (1.6) BS02 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613880 7cpk:A (1.6) BS03 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613881 7cpl:A (1.52) BS01 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613882 7cpl:A (1.52) BS02 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613883 7cpl:A (1.52) BS03 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    613884 7cpo:A (2.5) BS01 peptide ? N/A G1KTN1 33637616
    613885 7cpp:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 2713354
    613886 7cpp:A (2.0) BS02 NCM 1.14.15.1 GO:0004497 ... P00183 2713354
    613887 7cpq:A (2.595) BS01 GTP 3.6.5.- GO:0000226 ... P81947 N/A
    613888 7cpq:A (2.595) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A
    613889 7cpq:B (2.595) BS01 G9X ? GO:0000226 ... Q6B856 N/A
    613890 7cpq:B (2.595) BS02 GDP ? GO:0000226 ... Q6B856 N/A
    613891 7cpq:B (2.595) BS03 CA ? GO:0000226 ... Q6B856 N/A
    613892 7cpq:C (2.595) BS01 GTP 3.6.5.- GO:0000226 ... P81947 N/A
    613893 7cpq:D (2.595) BS01 GDP ? GO:0000226 ... Q6B856 N/A
    613894 7cpq:D (2.595) BS02 MG ? GO:0000226 ... Q6B856 N/A
    613895 7cpr:A (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613896 7cpr:B (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613897 7cpr:C (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613898 7cpr:D (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613899 7cpr:E (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613900 7cpr:F (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613901 7cpr:G (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613902 7cpr:H (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613903 7cpr:I (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613904 7cpr:J (2.12) BS01 ADP 6.3.1.2 GO:0003824 ... P20478 33327463
    613905 7cpu:LA (2.82) BS01 rna ? GO:0002181 ... P62918 36517592
    613906 7cpu:LA (2.82) BS02 rna ? GO:0002181 ... P62918 36517592
    613907 7cpu:LA (2.82) BS03 MG ? GO:0002181 ... P62918 36517592
    613908 7cpu:LB (2.82) BS01 rna ? GO:0002181 ... P27659 36517592
    613909 7cpu:LC (2.82) BS01 rna ? GO:0002181 ... Q9D8E6 36517592
    613910 7cpu:LC (2.82) BS02 rna ? GO:0002181 ... Q9D8E6 36517592
    613911 7cpu:LD (2.82) BS01 rna ? GO:0002181 ... P47962 36517592
    613912 7cpu:LD (2.82) BS02 rna ? GO:0002181 ... P47962 36517592
    613913 7cpu:LE (2.82) BS01 rna ? GO:0002181 ... P47911 36517592
    613914 7cpu:LF (2.82) BS01 rna ? GO:0000463 ... P14148 36517592
    613915 7cpu:LF (2.82) BS02 rna ? GO:0000463 ... P14148 36517592
    613916 7cpu:LG (2.82) BS01 rna ? GO:0002181 ... P12970 36517592
    613917 7cpu:LG (2.82) BS02 rna ? GO:0002181 ... P12970 36517592
    613918 7cpu:LH (2.82) BS01 rna ? GO:0002181 ... P51410 36517592
    613919 7cpu:LI (2.82) BS01 rna ? GO:0003735 ... Q6ZWV3 36517592
    613920 7cpu:LI (2.82) BS02 rna ? GO:0003735 ... Q6ZWV3 36517592
    613921 7cpu:LJ (2.82) BS01 rna ? GO:0000027 ... Q9CXW4 36517592
    613922 7cpu:LJ (2.82) BS02 rna ? GO:0000027 ... Q9CXW4 36517592
    613923 7cpu:LL (2.82) BS01 rna ? GO:0001824 ... P47963 36517592
    613924 7cpu:LL (2.82) BS02 rna ? GO:0001824 ... P47963 36517592
    613925 7cpu:LM (2.82) BS01 rna ? GO:0002181 ... Q9CR57 36517592
    613926 7cpu:LN (2.82) BS01 rna ? GO:0002181 ... Q9CZM2 36517592
    613927 7cpu:LN (2.82) BS02 rna ? GO:0002181 ... Q9CZM2 36517592
    613928 7cpu:LO (2.82) BS01 rna ? GO:0002181 ... P19253 36517592
    613929 7cpu:LP (2.82) BS01 rna ? GO:0002181 ... Q9CPR4 36517592
    613930 7cpu:LP (2.82) BS02 rna ? GO:0002181 ... Q9CPR4 36517592
    613931 7cpu:LQ (2.82) BS01 rna ? GO:0002181 ... P35980 36517592
    613932 7cpu:LR (2.82) BS01 rna ? GO:0002181 ... P84099 36517592
    613933 7cpu:LR (2.82) BS02 rna ? GO:0002181 ... P84099 36517592
    613934 7cpu:LS (2.82) BS01 rna ? GO:0002181 ... P62717 36517592
    613935 7cpu:LS (2.82) BS02 rna ? GO:0002181 ... P62717 36517592
    613936 7cpu:LT (2.82) BS01 rna ? GO:0002181 ... O09167 36517592
    613937 7cpu:LT (2.82) BS02 rna ? GO:0002181 ... O09167 36517592
    613938 7cpu:LT (2.82) BS03 MG ? GO:0002181 ... O09167 36517592
    613939 7cpu:LU (2.82) BS01 rna ? GO:0003723 ... P67984 36517592
    613940 7cpu:LV (2.82) BS01 rna ? GO:0000122 ... P62830 36517592
    613941 7cpu:LV (2.82) BS02 rna ? GO:0000122 ... P62830 36517592
    613942 7cpu:LV (2.82) BS03 MG ? GO:0000122 ... P62830 36517592
    613943 7cpu:LW (2.82) BS01 rna ? GO:0000027 ... Q8BP67 36517592
    613944 7cpu:LX (2.82) BS01 rna ? GO:0002181 ... P62751 36517592
    613945 7cpu:LX (2.82) BS02 rna ? GO:0002181 ... P62751 36517592
    613946 7cpu:LY (2.82) BS01 rna ? GO:0002181 ... P61255 36517592
    613947 7cpu:LY (2.82) BS02 rna ? GO:0002181 ... P61255 36517592
    613948 7cpu:LZ (2.82) BS01 rna ? GO:0002181 ... P61358 36517592
    613949 7cpu:La (2.82) BS01 rna ? GO:0002181 ... P14115 36517592
    613950 7cpu:Lb (2.82) BS01 rna ? GO:0002181 ... P47915 36517592
    613951 7cpu:Lc (2.82) BS01 rna ? GO:0002181 ... P62889 36517592
    613952 7cpu:Ld (2.82) BS01 rna ? GO:0002181 ... P62900 36517592
    613953 7cpu:Le (2.82) BS01 rna ? GO:0002181 ... P62911 36517592
    613954 7cpu:Le (2.82) BS02 MG ? GO:0002181 ... P62911 36517592
    613955 7cpu:Lf (2.82) BS01 rna ? GO:0002181 ... O55142 36517592
    613956 7cpu:Lf (2.82) BS02 MG ? GO:0002181 ... O55142 36517592
    613957 7cpu:Lg (2.82) BS01 rna ? GO:0002181 ... Q9D1R9 36517592
    613958 7cpu:Lg (2.82) BS02 MG ? GO:0002181 ... Q9D1R9 36517592
    613959 7cpu:Lh (2.82) BS01 rna ? GO:0000463 ... Q6ZWV7 36517592
    613960 7cpu:Lh (2.82) BS02 rna ? GO:0000463 ... Q6ZWV7 36517592
    613961 7cpu:Li (2.82) BS01 rna ? GO:0002181 ... P47964 36517592
    613962 7cpu:Lj (2.82) BS01 rna ? GO:0002181 ... Q9D823 36517592
    613963 7cpu:Lj (2.82) BS02 rna ? GO:0002181 ... Q9D823 36517592
    613964 7cpu:Lj (2.82) BS03 ZN ? GO:0002181 ... Q9D823 36517592
    613965 7cpu:Lk (2.82) BS01 rna ? GO:0001501 ... Q9JJI8 36517592
    613966 7cpu:Ll (2.82) BS01 rna ? GO:0003735 ... Q505A8 36517592
    613967 7cpu:Ll (2.82) BS02 rna ? GO:0003735 ... Q505A8 36517592
    613968 7cpu:Lm (2.82) BS01 rna ? GO:0002181 ... P62984 36517592
    613969 7cpu:Lm (2.82) BS02 ZN ? GO:0002181 ... P62984 36517592
    613970 7cpu:Lo (2.82) BS01 rna ? GO:0002181 ... P83882 36517592
    613971 7cpu:Lo (2.82) BS02 rna ? GO:0002181 ... P83882 36517592
    613972 7cpu:Lo (2.82) BS03 ZN ? GO:0002181 ... P83882 36517592
    613973 7cpu:Lp (2.82) BS01 rna ? GO:0002181 ... P61514 36517592
    613974 7cpu:Lp (2.82) BS02 ZN ? GO:0002181 ... P61514 36517592
    613975 7cpu:Lr (2.82) BS01 rna ? GO:0002181 ... P41105 36517592
    613976 7cpu:SA (2.82) BS01 rna ? GO:0000028 ... P14206 36517592
    613977 7cpu:SB (2.82) BS01 rna ? GO:0002181 ... P97351 36517592
    613978 7cpu:SB (2.82) BS02 rna ? GO:0002181 ... P97351 36517592
    613979 7cpu:SC (2.82) BS01 rna ? GO:0002181 ... P25444 36517592
    613980 7cpu:SD (2.82) BS01 rna 4.2.99.18 GO:0002181 ... P62908 36517592
    613981 7cpu:SE (2.82) BS01 rna ? GO:0002181 ... P62702 36517592
    613982 7cpu:SF (2.82) BS01 rna ? GO:0002181 ... P97461 36517592
    613983 7cpu:SF (2.82) BS02 MG ? GO:0002181 ... P97461 36517592
    613984 7cpu:SG (2.82) BS01 rna ? GO:0000082 ... P62754 36517592
    613985 7cpu:SH (2.82) BS01 rna ? GO:0001843 ... P62082 36517592
    613986 7cpu:SI (2.82) BS01 rna ? GO:0002181 ... P62242 36517592
    613987 7cpu:SJ (2.82) BS01 rna ? GO:0002181 ... Q6ZWN5 36517592
    613988 7cpu:SK (2.82) BS01 rna ? GO:0002181 ... P63325 36517592
    613989 7cpu:SL (2.82) BS01 rna ? GO:0002181 ... P62281 36517592
    613990 7cpu:SN (2.82) BS01 rna ? GO:0002181 ... P62301 36517592
    613991 7cpu:SN (2.82) BS02 rna ? GO:0002181 ... P62301 36517592
    613992 7cpu:SO (2.82) BS01 rna ? GO:0000028 ... P62264 36517592
    613993 7cpu:SP (2.82) BS01 rna ? GO:0000056 ... P62843 36517592
    613994 7cpu:SQ (2.82) BS01 rna ? GO:0002181 ... P14131 36517592
    613995 7cpu:SR (2.82) BS01 rna ? GO:0002181 ... P63276 36517592
    613996 7cpu:SS (2.82) BS01 rna ? GO:0002181 ... P62270 36517592
    613997 7cpu:ST (2.82) BS01 rna ? GO:0002181 ... Q9CZX8 36517592
    613998 7cpu:SU (2.82) BS01 rna ? GO:0002181 ... P60867 36517592
    613999 7cpu:SW (2.82) BS01 rna ? GO:0002181 ... P62245 36517592
    614000 7cpu:SX (2.82) BS01 rna ? GO:0002181 ... P62267 36517592

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).