SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    615401 7d0j:F (3.42) BS03 CLA ? GO:0009522 ... P12356 33597543
    615402 7d0j:F (3.42) BS04 CLA ? GO:0009522 ... P12356 33597543
    615403 7d0j:G (3.42) BS01 CLA ? GO:0009522 ... P14224 33597543
    615404 7d0j:G (3.42) BS02 CLA ? GO:0009522 ... P14224 33597543
    615405 7d0j:G (3.42) BS03 CLA ? GO:0009522 ... P14224 33597543
    615406 7d0j:G (3.42) BS04 CLA ? GO:0009522 ... P14224 33597543
    615407 7d0j:H (3.42) BS01 CLA ? GO:0009522 ... P13352 33597543
    615408 7d0j:H (3.42) BS02 CLA ? GO:0009522 ... P13352 33597543
    615409 7d0j:H (3.42) BS03 CLA ? GO:0009522 ... P13352 33597543
    615410 7d0j:H (3.42) BS04 CLA ? GO:0009522 ... P13352 33597543
    615411 7d0j:I (3.42) BS01 CLA ? GO:0009522 ... A8IFG7 33597543
    615412 7d0j:J (3.42) BS01 CLA ? GO:0009507 ... P59777 33597543
    615413 7d0j:J (3.42) BS02 CLA ? GO:0009507 ... P59777 33597543
    615414 7d0j:J (3.42) BS03 CLA ? GO:0009507 ... P59777 33597543
    615415 7d0j:J (3.42) BS04 CLA ? GO:0009507 ... P59777 33597543
    615416 7d0j:K (3.42) BS01 CLA ? GO:0009522 ... P14225 33597543
    615417 7d0j:K (3.42) BS02 CLA ? GO:0009522 ... P14225 33597543
    615418 7d0j:K (3.42) BS03 CLA ? GO:0009522 ... P14225 33597543
    615419 7d0j:K (3.42) BS04 CLA ? GO:0009522 ... P14225 33597543
    615420 7d0j:K (3.42) BS05 CLA ? GO:0009522 ... P14225 33597543
    615421 7d0j:L (3.42) BS01 CLA ? GO:0009522 ... A8IL32 33597543
    615422 7d0j:L (3.42) BS02 CLA ? GO:0009522 ... A8IL32 33597543
    615423 7d0j:L (3.42) BS03 CLA ? GO:0009522 ... A8IL32 33597543
    615424 7d0j:L (3.42) BS04 CLA ? GO:0009522 ... A8IL32 33597543
    615425 7d0j:L (3.42) BS05 CLA ? GO:0009522 ... A8IL32 33597543
    615426 7d0j:L (3.42) BS06 CLA ? GO:0009522 ... A8IL32 33597543
    615427 7d0j:L (3.42) BS07 CLA ? GO:0009522 ... A8IL32 33597543
    615428 7d0j:O (3.42) BS01 CLA ? N/A A8JCL6 33597543
    615429 7d0j:O (3.42) BS02 CLA ? N/A A8JCL6 33597543
    615430 7d0j:O (3.42) BS03 CLA ? N/A A8JCL6 33597543
    615431 7d0j:O (3.42) BS04 CLA ? N/A A8JCL6 33597543
    615432 7d0j:O (3.42) BS05 CLA ? N/A A8JCL6 33597543
    615433 7d0j:P (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    615434 7d0j:P (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    615435 7d0j:P (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    615436 7d0j:P (3.42) BS04 CHL ? GO:0009765 ... Q93WL4 33597543
    615437 7d0j:P (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    615438 7d0j:P (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    615439 7d0j:P (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    615440 7d0j:P (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    615441 7d0j:P (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    615442 7d0j:P (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    615443 7d0j:P (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    615444 7d0j:P (3.42) BS12 CHL ? GO:0009765 ... Q93WL4 33597543
    615445 7d0j:P (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    615446 7d0j:Q (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    615447 7d0j:Q (3.42) BS02 CHL ? GO:0009765 ... Q93WL4 33597543
    615448 7d0j:Q (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    615449 7d0j:Q (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    615450 7d0j:Q (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    615451 7d0j:Q (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    615452 7d0j:Q (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    615453 7d0j:Q (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    615454 7d0j:Q (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    615455 7d0j:Q (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    615456 7d0j:Q (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    615457 7d0j:Q (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    615458 7d0j:Q (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    615459 7d0j:R (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    615460 7d0j:R (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    615461 7d0j:R (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    615462 7d0j:R (3.42) BS04 CHL ? GO:0009765 ... Q93WL4 33597543
    615463 7d0j:R (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    615464 7d0j:R (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    615465 7d0j:R (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    615466 7d0j:R (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    615467 7d0j:R (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    615468 7d0j:R (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    615469 7d0j:R (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    615470 7d0j:R (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    615471 7d0j:R (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    615472 7d0j:S (3.42) BS01 CLA ? GO:0009416 ... A8J264 33597543
    615473 7d0j:S (3.42) BS02 CLA ? GO:0009416 ... A8J264 33597543
    615474 7d0j:S (3.42) BS03 CHL ? GO:0009416 ... A8J264 33597543
    615475 7d0j:S (3.42) BS04 CLA ? GO:0009416 ... A8J264 33597543
    615476 7d0j:S (3.42) BS05 CLA ? GO:0009416 ... A8J264 33597543
    615477 7d0j:S (3.42) BS06 CLA ? GO:0009416 ... A8J264 33597543
    615478 7d0j:S (3.42) BS07 CHL ? GO:0009416 ... A8J264 33597543
    615479 7d0j:S (3.42) BS08 CHL ? GO:0009416 ... A8J264 33597543
    615480 7d0j:S (3.42) BS09 CHL ? GO:0009416 ... A8J264 33597543
    615481 7d0j:S (3.42) BS10 CHL ? GO:0009416 ... A8J264 33597543
    615482 7d0j:S (3.42) BS11 CHL ? GO:0009416 ... A8J264 33597543
    615483 7d0j:S (3.42) BS12 CLA ? GO:0009416 ... A8J264 33597543
    615484 7d0j:S (3.42) BS13 CLA ? GO:0009416 ... A8J264 33597543
    615485 7d0j:S (3.42) BS14 CLA ? GO:0009416 ... A8J264 33597543
    615486 7d0j:S (3.42) BS15 CLA ? GO:0009416 ... A8J264 33597543
    615487 7d0j:S (3.42) BS16 CLA ? GO:0009416 ... A8J264 33597543
    615488 7d0j:S (3.42) BS17 CHL ? GO:0009416 ... A8J264 33597543
    615489 7d0j:T (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    615490 7d0j:T (3.42) BS02 CHL ? GO:0009765 ... Q93WL4 33597543
    615491 7d0j:T (3.42) BS03 CLA ? GO:0009765 ... Q93WL4 33597543
    615492 7d0j:T (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    615493 7d0j:T (3.42) BS05 CHL ? GO:0009765 ... Q93WL4 33597543
    615494 7d0j:T (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    615495 7d0j:T (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    615496 7d0j:T (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    615497 7d0j:T (3.42) BS09 CLA ? GO:0009765 ... Q93WL4 33597543
    615498 7d0j:T (3.42) BS10 CLA ? GO:0009765 ... Q93WL4 33597543
    615499 7d0j:T (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    615500 7d0j:T (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    615501 7d0j:T (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    615502 7d0j:U (3.42) BS01 CHL ? GO:0009765 ... Q93WL4 33597543
    615503 7d0j:U (3.42) BS02 CLA ? GO:0009765 ... Q93WL4 33597543
    615504 7d0j:U (3.42) BS03 CHL ? GO:0009765 ... Q93WL4 33597543
    615505 7d0j:U (3.42) BS04 CLA ? GO:0009765 ... Q93WL4 33597543
    615506 7d0j:U (3.42) BS05 CLA ? GO:0009765 ... Q93WL4 33597543
    615507 7d0j:U (3.42) BS06 CHL ? GO:0009765 ... Q93WL4 33597543
    615508 7d0j:U (3.42) BS07 CHL ? GO:0009765 ... Q93WL4 33597543
    615509 7d0j:U (3.42) BS08 CHL ? GO:0009765 ... Q93WL4 33597543
    615510 7d0j:U (3.42) BS09 CHL ? GO:0009765 ... Q93WL4 33597543
    615511 7d0j:U (3.42) BS10 CHL ? GO:0009765 ... Q93WL4 33597543
    615512 7d0j:U (3.42) BS11 CLA ? GO:0009765 ... Q93WL4 33597543
    615513 7d0j:U (3.42) BS12 CLA ? GO:0009765 ... Q93WL4 33597543
    615514 7d0j:U (3.42) BS13 CLA ? GO:0009765 ... Q93WL4 33597543
    615515 7d0j:U (3.42) BS14 CLA ? GO:0009765 ... Q93WL4 33597543
    615516 7d0j:a (3.42) BS01 CHL ? GO:0009765 ... Q05093 33597543
    615517 7d0j:a (3.42) BS02 CLA ? GO:0009765 ... Q05093 33597543
    615518 7d0j:a (3.42) BS03 CLA ? GO:0009765 ... Q05093 33597543
    615519 7d0j:a (3.42) BS04 CLA ? GO:0009765 ... Q05093 33597543
    615520 7d0j:a (3.42) BS05 CLA ? GO:0009765 ... Q05093 33597543
    615521 7d0j:a (3.42) BS06 CHL ? GO:0009765 ... Q05093 33597543
    615522 7d0j:a (3.42) BS07 CLA ? GO:0009765 ... Q05093 33597543
    615523 7d0j:a (3.42) BS08 CLA ? GO:0009765 ... Q05093 33597543
    615524 7d0j:a (3.42) BS09 CLA ? GO:0009765 ... Q05093 33597543
    615525 7d0j:a (3.42) BS10 CLA ? GO:0009765 ... Q05093 33597543
    615526 7d0j:a (3.42) BS11 CLA ? GO:0009765 ... Q05093 33597543
    615527 7d0j:a (3.42) BS12 CLA ? GO:0009765 ... Q05093 33597543
    615528 7d0j:a (3.42) BS13 CLA ? GO:0009765 ... Q05093 33597543
    615529 7d0o:A (2.51) BS01 peptide 2.3.1.48 GO:0004402 ... O95251 34259319
    615530 7d0o:A (2.51) BS02 ZN 2.3.1.48 GO:0004402 ... O95251 34259319
    615531 7d0p:A (1.8) BS01 peptide 2.3.1.48 GO:0004402 ... O95251 34259319
    615532 7d0p:A (1.8) BS02 1VU 2.3.1.48 GO:0004402 ... O95251 34259319
    615533 7d0p:A (1.8) BS03 ZN 2.3.1.48 GO:0004402 ... O95251 34259319
    615534 7d0q:A (2.21) BS01 peptide 2.3.1.48 GO:0004402 ... O95251 34259319
    615535 7d0q:A (2.21) BS02 ZN 2.3.1.48 GO:0004402 ... O95251 34259319
    615536 7d0q:A (2.21) BS03 BCO 2.3.1.48 GO:0004402 ... O95251 34259319
    615537 7d0r:A (1.95) BS01 peptide 2.3.1.48 GO:0004402 ... O95251 34259319
    615538 7d0r:A (1.95) BS02 ZN 2.3.1.48 GO:0004402 ... O95251 34259319
    615539 7d0r:A (1.95) BS03 COO 2.3.1.48 GO:0004402 ... O95251 34259319
    615540 7d0s:A (2.3) BS01 peptide 2.3.1.48 GO:0004402 ... O95251 34259319
    615541 7d0s:A (2.3) BS02 SCA 2.3.1.48 GO:0004402 ... O95251 34259319
    615542 7d0s:A (2.3) BS03 ZN 2.3.1.48 GO:0004402 ... O95251 34259319
    615543 7d0t:A (1.74) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615544 7d0t:A (1.74) BS02 ZP6 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615545 7d0t:A (1.74) BS03 GQR 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615546 7d0t:B (1.74) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615547 7d0t:B (1.74) BS02 ZP6 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615548 7d0t:B (1.74) BS03 GQR 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615549 7d0u:A (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615550 7d0u:A (1.68) BS02 D0L 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615551 7d0u:B (1.68) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615552 7d0u:B (1.68) BS02 D0L 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615553 7d0v:A (2.175) BS01 FUC 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615554 7d0v:A (2.175) BS02 ZN 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615555 7d0v:A (2.175) BS03 ZN 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615556 7d0v:A (2.175) BS04 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615557 7d0v:B (2.175) BS01 ZN 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615558 7d0v:B (2.175) BS02 ZN 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615559 7d0v:B (2.175) BS03 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    615560 7d11:A (-1.00) BS01 ZN ? GO:0003700 ... Q9SI37 N/A
    615561 7d17:A (2.998) BS01 ZN 2.3.2.5 GO:0008270 ... A0A267GXB9 33774034
    615562 7d18:A (1.332) BS01 ZN ? GO:0008270 ... A0A1Q3QTC5 33774034
    615563 7d19:A (2.35) BS01 GOC ? N/A P97784 33464888
    615564 7d19:B (2.35) BS01 GOC ? N/A P97784 33464888
    615565 7d1a:C (3.8) BS01 rna 2.7.7.49
    3.1.-.-
    GO:0003720 ... P0A3U0 33021674
    615566 7d1a:C (3.8) BS02 rna 2.7.7.49
    3.1.-.-
    GO:0003720 ... P0A3U0 33021674
    615567 7d1b:A (1.24) BS01 ZN ? GO:0004177 ... A0A225DNX9 33774034
    615568 7d1c:A (1.91) BS01 GOF ? N/A P97784 33464888
    615569 7d1d:A (1.75) BS01 ZN ? GO:0004177 ... Q8A4P9 33774034
    615570 7d1d:A (1.75) BS02 1BN ? GO:0004177 ... Q8A4P9 33774034
    615571 7d1e:A (1.85) BS01 ZN N/A N/A N/A 33774034
    615572 7d1e:A (1.85) BS02 AHN N/A N/A N/A 33774034
    615573 7d1f:A (1.45) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615574 7d1f:A (1.45) BS02 D0L 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615575 7d1f:B (1.45) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615576 7d1f:B (1.45) BS02 D0L 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 N/A
    615577 7d1h:A (1.69) BS01 ZN 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615578 7d1m:A (1.35) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 32887884 BindingDB: IC50=190nM
    615579 7d1m:B (1.35) BS01 K36 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 32887884 BindingDB: IC50=190nM
    615580 7d1n:A (2.26) BS01 CU 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615581 7d1n:A (2.26) BS02 CU 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615582 7d1n:A (2.26) BS03 CU 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615583 7d1n:A (2.26) BS04 CU 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615584 7d1n:A (2.26) BS05 BCT 2.3.2.5 GO:0005576 ... B7QK46 33774034
    615585 7d1o:A (1.78) BS01 NNA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 33542181
    615586 7d1t:A (1.95) BS01 OEX 1.10.3.9 GO:0005506 ... P51765 33753866
    615587 7d1t:A (1.95) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 33753866
    615588 7d1t:A (1.95) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 33753866
    615589 7d1t:A (1.95) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 33753866
    615590 7d1t:A (1.95) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 33753866
    615591 7d1t:A (1.95) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 33753866
    615592 7d1t:A (1.95) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 33753866
    615593 7d1t:A (1.95) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 33753866
    615594 7d1t:A (1.95) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 33753866
    615595 7d1t:A (1.95) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 33753866
    615596 7d1t:B (1.95) BS01 CLA ? GO:0009521 ... D0VWR1 33753866
    615597 7d1t:B (1.95) BS02 CLA ? GO:0009521 ... D0VWR1 33753866
    615598 7d1t:B (1.95) BS03 CLA ? GO:0009521 ... D0VWR1 33753866
    615599 7d1t:B (1.95) BS04 CLA ? GO:0009521 ... D0VWR1 33753866
    615600 7d1t:B (1.95) BS05 CLA ? GO:0009521 ... D0VWR1 33753866

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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