SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    622001 7e0k:U (3.09) BS16 CHL ? GO:0009416 ... Q93WL4 34239095
    622002 7e0k:V (3.09) BS01 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622003 7e0k:V (3.09) BS02 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622004 7e0k:V (3.09) BS03 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622005 7e0k:V (3.09) BS04 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622006 7e0k:V (3.09) BS05 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622007 7e0k:V (3.09) BS06 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622008 7e0k:V (3.09) BS07 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622009 7e0k:V (3.09) BS08 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622010 7e0k:V (3.09) BS09 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622011 7e0k:V (3.09) BS10 CHL ? GO:0009416 ... Q9ZSJ4 34239095
    622012 7e0k:V (3.09) BS11 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622013 7e0k:V (3.09) BS12 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622014 7e0k:V (3.09) BS13 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622015 7e0k:V (3.09) BS14 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622016 7e0k:V (3.09) BS15 CLA ? GO:0009416 ... Q9ZSJ4 34239095
    622017 7e0k:W (3.09) BS01 CHL ? GO:0009416 ... Q93WE0 34239095
    622018 7e0k:W (3.09) BS02 CHL ? GO:0009416 ... Q93WE0 34239095
    622019 7e0k:W (3.09) BS03 CHL ? GO:0009416 ... Q93WE0 34239095
    622020 7e0k:W (3.09) BS04 CLA ? GO:0009416 ... Q93WE0 34239095
    622021 7e0k:W (3.09) BS05 CLA ? GO:0009416 ... Q93WE0 34239095
    622022 7e0k:W (3.09) BS06 CLA ? GO:0009416 ... Q93WE0 34239095
    622023 7e0k:W (3.09) BS07 CHL ? GO:0009416 ... Q93WE0 34239095
    622024 7e0k:W (3.09) BS08 CHL ? GO:0009416 ... Q93WE0 34239095
    622025 7e0k:W (3.09) BS09 CHL ? GO:0009416 ... Q93WE0 34239095
    622026 7e0k:W (3.09) BS10 CHL ? GO:0009416 ... Q93WE0 34239095
    622027 7e0k:W (3.09) BS11 CHL ? GO:0009416 ... Q93WE0 34239095
    622028 7e0k:W (3.09) BS12 CLA ? GO:0009416 ... Q93WE0 34239095
    622029 7e0k:W (3.09) BS13 CLA ? GO:0009416 ... Q93WE0 34239095
    622030 7e0k:W (3.09) BS14 CLA ? GO:0009416 ... Q93WE0 34239095
    622031 7e0k:W (3.09) BS15 CLA ? GO:0009416 ... Q93WE0 34239095
    622032 7e0k:W (3.09) BS16 CLA ? GO:0009416 ... Q93WE0 34239095
    622033 7e0l:A (2.82) BS01 FS2 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622034 7e0l:A (2.82) BS02 SF4 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622035 7e0l:A (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622036 7e0l:B (2.82) BS01 FS2 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622037 7e0l:B (2.82) BS02 SF4 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622038 7e0l:B (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622039 7e0l:K (2.82) BS01 FS2 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622040 7e0l:K (2.82) BS02 SF4 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622041 7e0l:K (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622042 7e0l:M (2.82) BS01 FS2 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622043 7e0l:M (2.82) BS02 SF4 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622044 7e0l:M (2.82) BS03 FE 1.7.99.1 GO:0003824 ... D9PYV4 N/A
    622045 7e0o:A (3.337) BS01 HS0 1.13.11.52 GO:0002376 ... P14902 34110158
    622046 7e0o:A (3.337) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622047 7e0o:B (3.337) BS01 HS0 1.13.11.52 GO:0002376 ... P14902 34110158
    622048 7e0o:B (3.337) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622049 7e0p:A (2.635) BS01 HU0 1.13.11.52 GO:0002376 ... P14902 34110158 BindingDB: IC50=5300nM
    622050 7e0p:A (2.635) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622051 7e0p:B (2.635) BS01 HU0 1.13.11.52 GO:0002376 ... P14902 34110158 BindingDB: IC50=5300nM
    622052 7e0p:B (2.635) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622053 7e0q:A (2.462) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622054 7e0q:A (2.462) BS02 HU3 1.13.11.52 GO:0002376 ... P14902 34110158
    622055 7e0q:B (2.462) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622056 7e0q:B (2.462) BS02 HU3 1.13.11.52 GO:0002376 ... P14902 34110158
    622057 7e0s:A (2.712) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622058 7e0s:A (2.712) BS02 HU6 1.13.11.52 GO:0002376 ... P14902 34110158
    622059 7e0s:B (2.712) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622060 7e0s:B (2.712) BS02 HU6 1.13.11.52 GO:0002376 ... P14902 34110158
    622061 7e0t:A (2.137) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622062 7e0t:A (2.137) BS02 HU9 1.13.11.52 GO:0002376 ... P14902 34110158
    622063 7e0t:B (2.137) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622064 7e0t:B (2.137) BS02 HU9 1.13.11.52 GO:0002376 ... P14902 34110158
    622065 7e0u:A (2.278) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622066 7e0u:A (2.278) BS02 HUC 1.13.11.52 GO:0002376 ... P14902 34110158
    622067 7e0u:B (2.278) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 34110158
    622068 7e0u:B (2.278) BS02 HUC 1.13.11.52 GO:0002376 ... P14902 34110158
    622069 7e0x:A (1.887) BS01 CO 1.13.11.27 GO:0003868 ... P93836 34542283
    622070 7e0x:A (1.887) BS02 4HP 1.13.11.27 GO:0003868 ... P93836 34542283
    622071 7e0z:A (2.162) BS01 peptide 2.7.11.11 GO:0000122 ... P05132 35297759
    622072 7e0z:A (2.162) BS02 ANP 2.7.11.11 GO:0000122 ... P05132 35297759
    622073 7e0z:A (2.162) BS03 MG 2.7.11.11 GO:0000122 ... P05132 35297759
    622074 7e11:A (3.43) BS01 peptide 2.7.11.11 GO:0000122 ... P05132 35297759
    622075 7e11:A (3.43) BS02 ANP 2.7.11.11 GO:0000122 ... P05132 35297759
    622076 7e12:A (2.796) BS01 peptide 2.7.11.11 GO:0000122 ... P05132 35297759
    622077 7e12:A (2.796) BS02 ANP 2.7.11.11 GO:0000122 ... P05132 35297759
    622078 7e12:A (2.796) BS03 MG 2.7.11.11 GO:0000122 ... P05132 35297759
    622079 7e13:A (2.86) BS01 PLP N/A GO:0004372 ... N/A N/A
    622080 7e13:A (2.86) BS02 PLP N/A GO:0004372 ... N/A N/A
    622081 7e13:B (2.86) BS01 PLP N/A GO:0004372 ... N/A N/A
    622082 7e13:B (2.86) BS02 PLP N/A GO:0004372 ... N/A N/A
    622083 7e13:C (2.86) BS01 PLP N/A GO:0004372 ... N/A N/A
    622084 7e13:D (2.86) BS01 PLP N/A GO:0004372 ... N/A N/A
    622085 7e14:R (2.9) BS01 V6G ? GO:0004888 ... P43220 34145245 BindingDB: EC50=600nM
    622086 7e14:R (2.9) BS02 CLR ? GO:0004888 ... P43220 34145245
    622087 7e14:R (2.9) BS03 CLR ? GO:0004888 ... P43220 34145245
    622088 7e14:R (2.9) BS04 CLR ? GO:0004888 ... P43220 34145245
    622089 7e14:R (2.9) BS05 CLR ? GO:0004888 ... P43220 34145245
    622090 7e14:R (2.9) BS06 CLR ? GO:0004888 ... P43220 34145245
    622091 7e18:A (1.65) BS01 HUR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 34313428
    622092 7e19:A (2.15) BS01 HUO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 34313428
    622093 7e1a:U (3.66) BS01 TCH 7.6.2.- GO:0000139 ... O95342 35043010
    622094 7e1b:A (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622095 7e1b:A (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622096 7e1b:B (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622097 7e1b:B (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622098 7e1b:C (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622099 7e1b:C (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622100 7e1b:D (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622101 7e1b:E (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622102 7e1b:E (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622103 7e1b:F (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622104 7e1b:F (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622105 7e1b:G (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622106 7e1b:G (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622107 7e1b:H (4.587) BS01 dna ? GO:0000156 ... Q87HP4 36647726
    622108 7e1b:H (4.587) BS02 dna ? GO:0000156 ... Q87HP4 36647726
    622109 7e1b:H (4.587) BS03 dna ? GO:0000156 ... Q87HP4 36647726
    622110 7e1c:A (1.9) BS01 CA ? GO:0000902 ... A0A0H3XJK5 36285441
    622111 7e1e:A (3.34) BS01 CA ? N/A Q98TC9 N/A
    622112 7e1e:A (3.34) BS02 CA ? N/A Q98TC9 N/A
    622113 7e1e:B (3.34) BS01 CA ? N/A Q98TC9 N/A
    622114 7e1e:B (3.34) BS02 CA ? N/A Q98TC9 N/A
    622115 7e1e:C (3.34) BS01 CA ? N/A Q98TC9 N/A
    622116 7e1e:C (3.34) BS02 CA ? N/A Q98TC9 N/A
    622117 7e1g:A (1.75) BS01 ANP ? GO:0000902 ... A0A0H3XJK5 36285441
    622118 7e1g:B (1.75) BS01 ANP ? GO:0000902 ... A0A0H3XJK5 36285441
    622119 7e1h:A (2.805) BS01 BEF ? GO:0000160 ... Q87HP4 36647726
    622120 7e1h:A (2.805) BS02 MG ? GO:0000160 ... Q87HP4 36647726
    622121 7e1h:B (2.805) BS01 BEF ? GO:0000160 ... Q87HP4 36647726
    622122 7e1h:B (2.805) BS02 MG ? GO:0000160 ... Q87HP4 36647726
    622123 7e1h:E (2.805) BS01 BEF ? GO:0000160 ... Q87HP4 36647726
    622124 7e1h:E (2.805) BS02 MG ? GO:0000160 ... Q87HP4 36647726
    622125 7e1i:A (3.301) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622126 7e1i:B (3.301) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622127 7e1i:D (3.301) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622128 7e1i:E (3.301) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622129 7e1i:I (3.301) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622130 7e1j:A (2.72) BS01 IHP ? GO:0005198 ... P12493 N/A
    622131 7e1j:B (2.72) BS01 IHP ? GO:0005198 ... P12493 N/A
    622132 7e1j:C (2.72) BS01 IHP ? GO:0005198 ... P12493 N/A
    622133 7e1j:D (2.72) BS01 IHP ? GO:0005198 ... P12493 N/A
    622134 7e1j:E (2.72) BS01 IHP ? GO:0005198 ... P12493 N/A
    622135 7e1k:A (2.4) BS01 IHP ? GO:0005198 ... T2CJ20 N/A
    622136 7e1n:A (2.1) BS01 ZHG ? GO:0000976 ... Q4JIX5 35568198
    622137 7e1n:B (2.1) BS01 ZHG ? GO:0000976 ... Q4JIX5 35568198
    622138 7e1p:A (1.63) BS01 J03 2.1.1.63 GO:0003824 ... Q973C7 N/A
    622139 7e1q:A (1.7) BS01 SF4 ? GO:0000166 ... A0A0B2E3F3 34836944
    622140 7e1q:A (1.7) BS02 FMN ? GO:0000166 ... A0A0B2E3F3 34836944
    622141 7e1r:A (2.795) BS01 FMN ? GO:0000166 ... B5Z7D6 34836944
    622142 7e1r:A (2.795) BS02 SF4 ? GO:0000166 ... B5Z7D6 34836944
    622143 7e1r:A (2.795) BS03 PN7 ? GO:0000166 ... B5Z7D6 34836944
    622144 7e1r:C (2.795) BS01 FMN ? GO:0000166 ... B5Z7D6 34836944
    622145 7e1r:C (2.795) BS02 SF4 ? GO:0000166 ... B5Z7D6 34836944
    622146 7e1r:C (2.795) BS03 PN7 ? GO:0000166 ... B5Z7D6 34836944
    622147 7e1s:A (2.31) BS01 FMN ? GO:0000166 ... B5Z7D6 34836944
    622148 7e1s:A (2.31) BS02 SF4 ? GO:0000166 ... B5Z7D6 34836944
    622149 7e1s:A (2.31) BS03 66S ? GO:0000166 ... B5Z7D6 34836944
    622150 7e1s:C (2.31) BS01 peptide ? GO:0000166 ... B5Z7D6 34836944
    622151 7e1s:C (2.31) BS02 FMN ? GO:0000166 ... B5Z7D6 34836944
    622152 7e1s:C (2.31) BS03 SF4 ? GO:0000166 ... B5Z7D6 34836944
    622153 7e1s:C (2.31) BS04 66S ? GO:0000166 ... B5Z7D6 34836944
    622154 7e1t:A (2.45) BS01 peptide ? GO:0000139 ... P51151 34793709
    622155 7e1t:A (2.45) BS02 MG ? GO:0000139 ... P51151 34793709
    622156 7e1t:A (2.45) BS03 GTP ? GO:0000139 ... P51151 34793709
    622157 7e1t:B (2.45) BS01 peptide ? GO:0000139 ... P51151 34793709
    622158 7e1t:B (2.45) BS02 MG ? GO:0000139 ... P51151 34793709
    622159 7e1t:B (2.45) BS03 GTP ? GO:0000139 ... P51151 34793709
    622160 7e1t:C (2.45) BS01 peptide ? GO:0008017 ... Q9NXR1 34793709
    622161 7e1v:A (2.68) BS01 MQ9 ? GO:0004497 ... P9WH23 34819223
    622162 7e1v:A (2.68) BS02 FES ? GO:0004497 ... P9WH23 34819223
    622163 7e1v:A (2.68) BS03 9YF ? GO:0004497 ... P9WH23 34819223
    622164 7e1v:A (2.68) BS04 9YF ? GO:0004497 ... P9WH23 34819223
    622165 7e1v:B (2.68) BS01 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622166 7e1v:B (2.68) BS02 HEM 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622167 7e1v:B (2.68) BS03 HEM 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622168 7e1v:B (2.68) BS04 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622169 7e1v:B (2.68) BS05 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622170 7e1v:B (2.68) BS06 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622171 7e1v:C (2.68) BS01 HEC 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622172 7e1v:C (2.68) BS02 HEC 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622173 7e1v:C (2.68) BS03 MQ9 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622174 7e1v:C (2.68) BS04 MQ9 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622175 7e1v:E (2.68) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34819223
    622176 7e1v:E (2.68) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34819223
    622177 7e1v:F (2.68) BS01 CU N/A GO:0004129 ... N/A 34819223
    622178 7e1v:F (2.68) BS02 HEA N/A GO:0004129 ... N/A 34819223
    622179 7e1v:F (2.68) BS03 HEA N/A GO:0004129 ... N/A 34819223
    622180 7e1v:G (2.68) BS01 9Y0 7.1.1.9 GO:0004129 ... A0R049 34819223
    622181 7e1v:H (2.68) BS01 MQ9 7.1.1.9 GO:0004129 ... A0R056 34819223
    622182 7e1v:M (2.68) BS01 FES ? GO:0004497 ... P9WH23 34819223
    622183 7e1v:M (2.68) BS02 9YF ? GO:0004497 ... P9WH23 34819223
    622184 7e1v:M (2.68) BS03 9YF ? GO:0004497 ... P9WH23 34819223
    622185 7e1v:N (2.68) BS01 HEM 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622186 7e1v:N (2.68) BS02 HEM 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622187 7e1v:N (2.68) BS03 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622188 7e1v:N (2.68) BS04 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622189 7e1v:N (2.68) BS05 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622190 7e1v:N (2.68) BS06 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622191 7e1v:N (2.68) BS07 MQ9 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622192 7e1v:N (2.68) BS08 9YF 7.1.1.8 GO:0005886 ... P9WP37 34819223
    622193 7e1v:O (2.68) BS01 MQ9 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622194 7e1v:O (2.68) BS02 HEC 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622195 7e1v:O (2.68) BS03 HEC 7.1.1.8 GO:0004129 ... P9WP35 34819223
    622196 7e1v:Q (2.68) BS01 CU 7.1.1.9 GO:0004129 ... A0R057 34819223
    622197 7e1v:Q (2.68) BS02 CU 7.1.1.9 GO:0004129 ... A0R057 34819223
    622198 7e1v:R (2.68) BS01 CU N/A GO:0004129 ... N/A 34819223
    622199 7e1v:R (2.68) BS02 HEA N/A GO:0004129 ... N/A 34819223
    622200 7e1v:R (2.68) BS03 HEA N/A GO:0004129 ... N/A 34819223

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).