SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    622601 7e5e:C (1.95) BS04 GDP ? GO:0003924 ... P63092 36170854
    622602 7e5e:D (1.95) BS01 peptide ? GO:0003924 ... P63092 36170854
    622603 7e5e:D (1.95) BS02 peptide ? GO:0003924 ... P63092 36170854
    622604 7e5e:D (1.95) BS03 GDP ? GO:0003924 ... P63092 36170854
    622605 7e5f:A (1.79) BS01 S44 ? GO:0003677 ... Q07869 34471048 BindingDB: EC50=54nM
    622606 7e5g:A (1.66) BS01 HVX ? GO:0003677 ... Q07869 34471048
    622607 7e5h:A (1.66) BS01 HW3 ? GO:0003677 ... Q07869 34471048
    622608 7e5i:A (1.58) BS01 HW3 ? GO:0003677 ... Q07869 34471048
    622609 7e5q:A (1.9) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 36345957
    622610 7e5q:A (1.9) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 36345957
    622611 7e5q:B (1.9) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 36345957
    622612 7e5q:B (1.9) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... P39597 36345957
    622613 7e5v:A (1.61) BS01 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622614 7e5v:B (1.61) BS01 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622615 7e5v:B (1.61) BS02 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622616 7e5v:B (1.61) BS03 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622617 7e5v:C (1.61) BS01 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622618 7e5v:C (1.61) BS02 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622619 7e5v:C (1.61) BS03 HZC 5.5.1.- GO:0016853 ... A0A2Z5XAU0 34121297
    622620 7e5z:A (3.6) BS01 MGD 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622621 7e5z:A (3.6) BS02 MGD 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622622 7e5z:A (3.6) BS03 FES 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622623 7e5z:A (3.6) BS04 SF4 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622624 7e5z:A (3.6) BS05 SF4 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622625 7e5z:A (3.6) BS06 SF4 1.17.1.9 GO:0003954 ... C5ATT7 N/A
    622626 7e5z:B (3.6) BS01 FMN 1.2.1.2 GO:0000166 ... C5ATT6 N/A
    622627 7e5z:B (3.6) BS02 SF4 1.2.1.2 GO:0000166 ... C5ATT6 N/A
    622628 7e5z:B (3.6) BS03 FES 1.2.1.2 GO:0000166 ... C5ATT6 N/A
    622629 7e60:A (2.24) BS01 ZN N/A N/A N/A N/A
    622630 7e60:A (2.24) BS02 HX9 N/A N/A N/A N/A
    622631 7e61:A (1.8) BS01 ZN N/A N/A N/A N/A
    622632 7e61:A (1.8) BS02 HXF N/A N/A N/A N/A
    622633 7e62:C (1.99) BS01 ZN ? N/A Q99K90 34242591
    622634 7e62:J (1.99) BS01 ZN ? N/A Q99K90 34242591
    622635 7e63:A (2.4) BS01 ZN N/A N/A N/A N/A
    622636 7e63:B (2.4) BS01 ZN N/A N/A N/A N/A
    622637 7e63:B (2.4) BS02 HY9 N/A N/A N/A N/A
    622638 7e64:A (2.9) BS01 ZN N/A N/A N/A N/A
    622639 7e64:A (2.9) BS02 HWX N/A N/A N/A N/A
    622640 7e65:A (2.65) BS01 ZN N/A N/A N/A N/A
    622641 7e65:A (2.65) BS02 HXO N/A N/A N/A N/A
    622642 7e65:B (2.65) BS01 ZN N/A N/A N/A N/A
    622643 7e66:A (2.84) BS01 ZN N/A N/A N/A N/A
    622644 7e66:A (2.84) BS02 HY6 N/A N/A N/A N/A
    622645 7e67:A (2.85) BS01 ZN N/A N/A N/A N/A
    622646 7e67:A (2.85) BS02 HXR N/A N/A N/A N/A
    622647 7e69:A (2.61) BS01 ZN N/A N/A N/A N/A
    622648 7e69:A (2.61) BS02 HX6 N/A N/A N/A N/A
    622649 7e6b:A (1.84) BS01 PMP 2.8.1.7 GO:0005515 ... O32164 35395703
    622650 7e6c:A (1.73) BS01 7TS 2.8.1.7 GO:0005515 ... O32164 35395703
    622651 7e6e:A (2.28) BS01 PMP 2.8.1.7 GO:0005515 ... O32164 35395703
    622652 7e6f:A (2.74) BS01 PMP 2.8.1.7 GO:0005515 ... O32164 35395703
    622653 7e6g:A (2.65) BS01 MG 2.7.7.65 GO:0005886 ... A0A069QEY1 34498587
    622654 7e6g:A (2.65) BS02 G2P 2.7.7.65 GO:0005886 ... A0A069QEY1 34498587
    622655 7e6i:A (2.39) BS01 BG6 1.1.1.49 GO:0004345 ... P48828 33765558
    622656 7e6j:A (1.9) BS01 peptide 1.14.11.16 GO:0018193 ... Q12797 33887099
    622657 7e6k:A (1.6) BS01 HYR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    622658 7e6k:A (1.6) BS02 HYR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    622659 7e6k:A (1.6) BS03 HYR 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    622660 7e6p:H (2.5) BS01 peptide N/A N/A N/A 34464082
    622661 7e6p:L (2.5) BS01 peptide N/A N/A N/A 34464082
    622662 7e6q:A (2.2) BS01 CA 3.2.1.18 GO:0004308 ... A1ILL9 35423449
    622663 7e6q:A (2.2) BS02 HZF 3.2.1.18 GO:0004308 ... A1ILL9 35423449
    622664 7e6q:B (2.2) BS01 CA 3.2.1.18 GO:0004308 ... A1ILL9 35423449
    622665 7e6q:B (2.2) BS02 HZF 3.2.1.18 GO:0004308 ... A1ILL9 35423449
    622666 7e6t:A (3.0) BS01 CA ? GO:0004930 ... P41180 34467854
    622667 7e6t:A (3.0) BS02 CA ? GO:0004930 ... P41180 34467854
    622668 7e6t:A (3.0) BS03 TCR ? GO:0004930 ... P41180 34467854
    622669 7e6t:B (3.0) BS01 CA ? GO:0004930 ... P41180 34467854
    622670 7e6t:B (3.0) BS02 CA ? GO:0004930 ... P41180 34467854
    622671 7e6t:B (3.0) BS03 TCR ? GO:0004930 ... P41180 34467854
    622672 7e6x:A (2.5) BS01 RET ? GO:0016020 ... Q8RUT8
    Q93WP2
    33752801
    622673 7e6y:A (2.5) BS01 RET ? GO:0016020 ... Q8RUT8
    Q93WP2
    33752801
    622674 7e6z:A (2.5) BS01 RET ? GO:0016020 ... Q8RUT8
    Q93WP2
    33752801
    622675 7e70:A (2.5) BS01 RET ? GO:0016020 ... Q8RUT8
    Q93WP2
    33752801
    622676 7e71:A (2.5) BS01 RET ? GO:0016020 ... Q8RUT8
    Q93WP2
    33752801
    622677 7e74:A (2.9) BS01 peptide ? N/A Q03111 36272410
    622678 7e74:B (2.9) BS01 peptide ? N/A Q03111 36272410
    622679 7e74:C (2.9) BS01 peptide ? N/A Q03111 36272410
    622680 7e74:D (2.9) BS01 peptide ? N/A Q03111 36272410
    622681 7e78:A (2.21) BS01 G6P 5.3.1.9 GO:0004347 ... Q1PBI3 33774822
    622682 7e78:C (2.21) BS01 G6P 5.3.1.9 GO:0004347 ... Q1PBI3 33774822
    622683 7e7b:A (2.6) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622684 7e7b:A (2.6) BS02 VCG ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622685 7e7b:B (2.6) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622686 7e7b:B (2.6) BS02 VCG ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622687 7e7b:B (2.6) BS03 VCG ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622688 7e7b:C (2.6) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622689 7e7b:C (2.6) BS02 VCG ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622690 7e7c:A (1.84) BS01 peptide ? N/A Q03111 N/A
    622691 7e7d:A (3.2) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622692 7e7d:B (3.2) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622693 7e7d:B (3.2) BS02 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622694 7e7d:C (3.2) BS01 ELA ? GO:0005201 ... P02452
    P0DTC2
    33692215
    622695 7e7e:A (3.8) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 34404805
    622696 7e7e:B (3.8) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 34404805
    622697 7e7f:A (1.4) BS01 HEM 1.14.15.4 GO:0004497 ... P15538 34485929
    622698 7e7f:A (1.4) BS02 MYT 1.14.15.4 GO:0004497 ... P15538 34485929 BindingDB: IC50=15nM
    622699 7e7h:A (2.2) BS01 FAD N/A GO:0016491 ... N/A N/A
    622700 7e7h:B (2.2) BS01 FAD N/A GO:0016491 ... N/A N/A
    622701 7e7l:A (3.53) BS01 4HP ? GO:0003824 ... A0A100YWM3 N/A
    622702 7e7l:B (3.53) BS01 4HP ? GO:0003824 ... A0A100YWM3 N/A
    622703 7e7m:A (2.85) BS01 RIP ? GO:0030246 ... Q8E283 N/A
    622704 7e7m:B (2.85) BS01 RIP ? GO:0030246 ... Q8E283 N/A
    622705 7e7m:C (2.85) BS01 RIP ? GO:0030246 ... Q8E283 N/A
    622706 7e7m:D (2.85) BS01 RIP ? GO:0030246 ... Q8E283 N/A
    622707 7e7n:A (1.55) BS01 R3F ? N/A A0A0S4WQH1 N/A
    622708 7e7n:A (1.55) BS02 R3F ? N/A A0A0S4WQH1 N/A
    622709 7e7n:A (1.55) BS03 R3F ? N/A A0A0S4WQH1 N/A
    622710 7e7o:A (3.4) BS01 HZL 7.6.2.1 GO:0001523 ... P78363 34158497
    622711 7e7q:A (3.3) BS01 ATP 7.6.2.1 GO:0001523 ... P78363 34158497
    622712 7e7q:A (3.3) BS02 ATP 7.6.2.1 GO:0001523 ... P78363 34158497
    622713 7e7q:A (3.3) BS03 MG 7.6.2.1 GO:0001523 ... P78363 34158497
    622714 7e7q:A (3.3) BS04 MG 7.6.2.1 GO:0001523 ... P78363 34158497
    622715 7e7r:A (1.82) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622716 7e7r:A (1.82) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622717 7e7r:A (1.82) BS03 R2F ? N/A A0A0S4WQH1 N/A
    622718 7e7r:B (1.82) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622719 7e7r:B (1.82) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622720 7e7r:B (1.82) BS03 R2F ? N/A A0A0S4WQH1 N/A
    622721 7e7s:A (3.3) BS01 CA 7.2.2.10 GO:0000045 ... P16615 34459010
    622722 7e7s:A (3.3) BS02 CA 7.2.2.10 GO:0000045 ... P16615 34459010
    622723 7e7t:A (1.98) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622724 7e7t:A (1.98) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622725 7e7t:A (1.98) BS03 R2F ? N/A A0A0S4WQH1 N/A
    622726 7e7t:B (1.98) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622727 7e7t:B (1.98) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622728 7e7t:B (1.98) BS03 R2F ? N/A A0A0S4WQH1 N/A
    622729 7e7u:A (2.1) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622730 7e7u:A (2.1) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622731 7e7u:B (2.1) BS01 R2F ? N/A A0A0S4WQH1 N/A
    622732 7e7u:B (2.1) BS02 R2F ? N/A A0A0S4WQH1 N/A
    622733 7e7v:A (1.61) BS01 R3F ? N/A A0A0S4WQH1 N/A
    622734 7e7v:A (1.61) BS02 R3F ? N/A A0A0S4WQH1 N/A
    622735 7e7v:B (1.61) BS01 R3F ? N/A A0A0S4WQH1 N/A
    622736 7e7v:B (1.61) BS02 R3F ? N/A A0A0S4WQH1 N/A
    622737 7e7v:C (1.61) BS01 R3F ? N/A A0A0S4WQH1 N/A
    622738 7e7v:C (1.61) BS02 R3F ? N/A A0A0S4WQH1 N/A
    622739 7e80:a (3.67) BS01 peptide ? GO:0009288 ... P16323 33882274
    622740 7e80:b (3.67) BS01 peptide ? GO:0009288 ... P16323 33882274
    622741 7e80:b (3.67) BS02 peptide ? GO:0009288 ... P16323 33882274
    622742 7e80:c (3.67) BS01 peptide ? GO:0009288 ... P16323 33882274
    622743 7e80:d (3.67) BS01 peptide ? GO:0009288 ... P16323 33882274
    622744 7e80:e (3.67) BS01 peptide ? GO:0009288 ... P16323 33882274
    622745 7e80:f (3.67) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622746 7e80:h (3.67) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622747 7e80:i (3.67) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622748 7e80:j (3.67) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622749 7e80:k (3.67) BS01 peptide ? GO:0009288 ... P16437 33882274
    622750 7e80:k (3.67) BS02 peptide ? GO:0009288 ... P16437 33882274
    622751 7e80:l (3.67) BS01 peptide ? GO:0009288 ... P16437 33882274
    622752 7e80:l (3.67) BS02 peptide ? GO:0009288 ... P16437 33882274
    622753 7e80:m (3.67) BS01 peptide ? GO:0009288 ... P16437 33882274
    622754 7e80:m (3.67) BS02 peptide ? GO:0009288 ... P16437 33882274
    622755 7e80:n (3.67) BS01 peptide ? GO:0009288 ... P16437 33882274
    622756 7e80:n (3.67) BS02 peptide ? GO:0009288 ... P16437 33882274
    622757 7e80:o (3.67) BS01 peptide ? GO:0009288 ... P16437 33882274
    622758 7e80:p (3.67) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622759 7e81:Ca (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622760 7e81:Cb (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622761 7e81:Cc (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622762 7e81:Cd (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622763 7e81:Cf (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622764 7e81:Ch (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622765 7e81:Cm (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622766 7e81:Cm (4.5) BS02 peptide ? GO:0003774 ... P15928 33882274
    622767 7e81:Cn (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622768 7e81:Cn (4.5) BS02 peptide ? GO:0003774 ... P15928 33882274
    622769 7e81:Cr (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622770 7e81:Cs (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622771 7e81:Ct (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622772 7e81:Cv (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622773 7e81:Ea (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622774 7e81:Ec (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622775 7e81:Ed (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622776 7e81:Ee (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622777 7e81:Ef (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622778 7e81:Fh (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622779 7e81:cg (4.5) BS01 peptide ? GO:0003774 ... P15928 33882274
    622780 7e82:a (3.3) BS01 peptide ? GO:0009288 ... P16323 33882274
    622781 7e82:b (3.3) BS01 peptide ? GO:0009288 ... P16323 33882274
    622782 7e82:b (3.3) BS02 peptide ? GO:0009288 ... P16323 33882274
    622783 7e82:c (3.3) BS01 peptide ? GO:0009288 ... P16323 33882274
    622784 7e82:d (3.3) BS01 peptide ? GO:0009288 ... P16323 33882274
    622785 7e82:e (3.3) BS01 peptide ? GO:0009288 ... P16323 33882274
    622786 7e82:f (3.3) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622787 7e82:h (3.3) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622788 7e82:i (3.3) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622789 7e82:j (3.3) BS01 peptide ? GO:0009288 ... P0A1I7 33882274
    622790 7e82:k (3.3) BS01 peptide ? GO:0009288 ... P16437 33882274
    622791 7e82:k (3.3) BS02 peptide ? GO:0009288 ... P16437 33882274
    622792 7e82:l (3.3) BS01 peptide ? GO:0009288 ... P16437 33882274
    622793 7e82:l (3.3) BS02 peptide ? GO:0009288 ... P16437 33882274
    622794 7e82:m (3.3) BS01 peptide ? GO:0009288 ... P16437 33882274
    622795 7e82:m (3.3) BS02 peptide ? GO:0009288 ... P16437 33882274
    622796 7e82:n (3.3) BS01 peptide ? GO:0009288 ... P16437 33882274
    622797 7e82:n (3.3) BS02 peptide ? GO:0009288 ... P16437 33882274
    622798 7e82:o (3.3) BS01 peptide ? GO:0009288 ... P16437 33882274
    622799 7e82:o (3.3) BS02 peptide ? GO:0009288 ... P16437 33882274
    622800 7e82:p (3.3) BS01 peptide ? GO:0009288 ... P0A1I7 33882274

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).