SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3108 3109 3110 3111 3112 3113 3114 3115 3116 3117 3118 3119 3120 3121 3122 3123 3124 3125 3126 3127 3128 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    623401 7eeu:D (2.9) BS03 ZN ? GO:0000976 ... P04637 N/A
    623402 7eeu:E (2.9) BS01 dna ? GO:0000976 ... P04637 N/A
    623403 7eeu:E (2.9) BS02 dna ? GO:0000976 ... P04637 N/A
    623404 7eeu:E (2.9) BS03 ZN ? GO:0000976 ... P04637 N/A
    623405 7eeu:F (2.9) BS01 dna ? GO:0000976 ... P04637 N/A
    623406 7eeu:F (2.9) BS02 dna ? GO:0000976 ... P04637 N/A
    623407 7eeu:F (2.9) BS03 ZN ? GO:0000976 ... P04637 N/A
    623408 7eeu:G (2.9) BS01 dna ? GO:0000976 ... P04637 N/A
    623409 7eeu:G (2.9) BS02 dna ? GO:0000976 ... P04637 N/A
    623410 7eeu:G (2.9) BS03 ZN ? GO:0000976 ... P04637 N/A
    623411 7eeu:H (2.9) BS01 dna ? GO:0000976 ... P04637 N/A
    623412 7eeu:H (2.9) BS02 dna ? GO:0000976 ... P04637 N/A
    623413 7eeu:H (2.9) BS03 ZN ? GO:0000976 ... P04637 N/A
    623414 7eev:A (2.15) BS01 DUT ? GO:0003935 ... N/A N/A
    623415 7eev:A (2.15) BS02 ZN ? GO:0003935 ... N/A N/A
    623416 7eev:B (2.15) BS01 DUT ? GO:0003935 ... N/A N/A
    623417 7eev:B (2.15) BS02 ZN ? GO:0003935 ... N/A N/A
    623418 7eew:A (2.896) BS01 SAH 2.1.1.72 GO:0003677 ... Q7MJG0 35337914
    623419 7eez:A (1.902) BS01 ZN ? GO:0003682 ... B7ZYP9 33913587
    623420 7ef0:A (1.5) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623421 7ef0:A (1.5) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623422 7ef0:B (1.5) BS01 ZN ? GO:0003682 ... B7ZYP9 33913587
    623423 7ef1:A (1.9) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623424 7ef1:A (1.9) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623425 7ef1:B (1.9) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623426 7ef1:B (1.9) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623427 7ef2:A (2.0) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623428 7ef2:A (2.0) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623429 7ef2:B (2.0) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623430 7ef2:B (2.0) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623431 7ef3:A (2.1) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623432 7ef3:A (2.1) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623433 7ef3:B (2.1) BS01 peptide ? GO:0003682 ... B7ZYP9 33913587
    623434 7ef3:B (2.1) BS02 ZN ? GO:0003682 ... B7ZYP9 33913587
    623435 7ef6:A (1.34) BS01 MG ? GO:0005634 ... Q9SKY5 34824243
    623436 7ef7:A (1.5) BS01 MG ? GO:0005634 ... Q9SKY5 34824243
    623437 7ef7:A (1.5) BS02 XMP ? GO:0005634 ... Q9SKY5 34824243
    623438 7ef8:A (2.45) BS01 dna 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623439 7ef8:A (2.45) BS02 dna 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623440 7ef8:A (2.45) BS03 SF4 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623441 7ef8:A (2.45) BS04 ZN 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623442 7ef9:A (1.97) BS01 dna 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623443 7ef9:A (1.97) BS02 dna 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623444 7ef9:A (1.97) BS03 SF4 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623445 7ef9:A (1.97) BS04 ZN 3.2.2.31 GO:0003677 ... Q99P21 34142156
    623446 7efc:A (1.7) BS01 BTN ? GO:0009374 ... P22629 N/A BindingDB: Kd=1.000000nM
    623447 7efd:A (1.77) BS01 BTN ? GO:0009374 ... P22629 N/A BindingDB: Kd=1.000000nM
    623448 7efj:A (1.992) BS01 J2C 5.2.1.8 GO:0000413 ... Q13526 35089030
    623449 7efl:A (3.4) BS01 MG 7.2.2.19 GO:0000166 ... P19156 34588453
    623450 7efl:A (3.4) BS02 J3C 7.2.2.19 GO:0000166 ... P19156 34588453
    623451 7efm:A (3.2) BS01 MG 7.2.2.19 GO:0000166 ... P19156 34588453
    623452 7efm:A (3.2) BS02 J3C 7.2.2.19 GO:0000166 ... P19156 34588453
    623453 7efn:A (3.2) BS01 MG 7.2.2.19 GO:0000166 ... P19156 34588453
    623454 7efn:A (3.2) BS02 J3C 7.2.2.19 GO:0000166 ... P19156 34588453
    623455 7efo:F (3.85) BS01 JSG ? GO:0005886 ... A0A1Y0Q3P9 34303191
    623456 7efo:G (3.85) BS01 JSG ? GO:0005886 ... A0A1Y0Q3C0 34303191
    623457 7efq:A (2.3) BS01 J3F ? GO:0003677 ... P37231 33919837
    623458 7efx:A (2.41) BS01 J3X 5.2.1.8 GO:0000413 ... Q13526 35089030
    623459 7eg0:A (3.4) BS01 J33 3.1.4.17 GO:0004114 ... Q14432 34707099 BindingDB: IC50=50nM
    623460 7eg0:A (3.4) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623461 7eg0:B (3.4) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623462 7eg0:C (3.4) BS01 J33 3.1.4.17 GO:0004114 ... Q14432 34707099 BindingDB: IC50=50nM
    623463 7eg0:C (3.4) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623464 7eg0:D (3.4) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623465 7eg1:A (3.2) BS01 X5M 3.1.4.17 GO:0004114 ... Q14432 34707099
    623466 7eg1:A (3.2) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623467 7eg1:B (3.2) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623468 7eg1:C (3.2) BS01 X5M 3.1.4.17 GO:0004114 ... Q14432 34707099
    623469 7eg1:C (3.2) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623470 7eg1:D (3.2) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623471 7eg2:A (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623472 7eg2:B (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623473 7eg2:C (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623474 7eg2:D (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623475 7eg2:E (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623476 7eg2:F (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623477 7eg2:G (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623478 7eg2:H (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623479 7eg2:I (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623480 7eg2:J (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623481 7eg2:K (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623482 7eg2:L (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623483 7eg2:M (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623484 7eg2:N (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623485 7eg2:O (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623486 7eg2:P (2.22) BS01 J2X ? GO:0005509 ... P02592 34115795
    623487 7eg3:A (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623488 7eg3:B (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623489 7eg3:C (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623490 7eg3:D (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623491 7eg3:E (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623492 7eg3:F (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623493 7eg3:G (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623494 7eg3:H (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623495 7eg3:I (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623496 7eg3:J (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623497 7eg3:K (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623498 7eg3:L (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623499 7eg3:M (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623500 7eg3:N (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623501 7eg3:O (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623502 7eg3:P (2.09) BS01 J2U ? GO:0005509 ... P02592 34115795
    623503 7eg4:A (3.2) BS01 J36 3.1.4.17 GO:0004114 ... Q14432 34707099
    623504 7eg4:A (3.2) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623505 7eg4:B (3.2) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623506 7eg4:C (3.2) BS01 J36 3.1.4.17 GO:0004114 ... Q14432 34707099
    623507 7eg4:C (3.2) BS02 MG 3.1.4.17 GO:0004114 ... Q14432 34707099
    623508 7eg4:D (3.2) BS01 ZN 3.1.-.- GO:0004540 ... Q8IYM2 34707099
    623509 7eg5:A (1.96) BS01 FMN ? GO:0000166 ... Q9CDV0 N/A
    623510 7eg5:B (1.96) BS01 FMN ? GO:0000166 ... Q9CDV0 N/A
    623511 7eg5:B (1.96) BS02 FMN ? GO:0000166 ... Q9CDV0 N/A
    623512 7eg6:A (3.1) BS01 dna ? GO:0000786 ... P84233 33907182
    623513 7eg6:A (3.1) BS02 dna ? GO:0000786 ... P84233 33907182
    623514 7eg6:B (3.1) BS01 dna ? GO:0000786 ... P62799 33907182
    623515 7eg6:B (3.1) BS02 dna ? GO:0000786 ... P62799 33907182
    623516 7eg6:C (3.1) BS01 dna ? GO:0000786 ... P06897 33907182
    623517 7eg6:C (3.1) BS02 dna ? GO:0000786 ... P06897 33907182
    623518 7eg6:D (3.1) BS01 dna ? GO:0000786 ... P02281 33907182
    623519 7eg6:D (3.1) BS02 dna ? GO:0000786 ... P02281 33907182
    623520 7eg6:E (3.1) BS01 dna ? GO:0000786 ... P84233 33907182
    623521 7eg6:E (3.1) BS02 dna ? GO:0000786 ... P84233 33907182
    623522 7eg6:F (3.1) BS01 dna ? GO:0000786 ... P62799 33907182
    623523 7eg6:F (3.1) BS02 dna ? GO:0000786 ... P62799 33907182
    623524 7eg6:G (3.1) BS01 peptide ? GO:0000786 ... P06897 33907182
    623525 7eg6:G (3.1) BS02 dna ? GO:0000786 ... P06897 33907182
    623526 7eg6:G (3.1) BS03 dna ? GO:0000786 ... P06897 33907182
    623527 7eg6:H (3.1) BS01 peptide ? GO:0000786 ... P02281 33907182
    623528 7eg6:H (3.1) BS02 dna ? GO:0000786 ... P02281 33907182
    623529 7eg6:H (3.1) BS03 dna ? GO:0000786 ... P02281 33907182
    623530 7eg7:A (6.2) BS01 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623531 7eg7:A (6.2) BS02 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623532 7eg7:P (6.2) BS01 dna ? GO:0000785 ... P20226 33795473
    623533 7eg7:P (6.2) BS02 dna ? GO:0000785 ... P20226 33795473
    623534 7eg7:Q (6.2) BS01 dna ? GO:0000979 ... P52655 33795473
    623535 7eg7:R (6.2) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623536 7eg7:R (6.2) BS02 ZN 2.3.1.48 GO:0000776 ... Q00403 33795473
    623537 7eg7:o (6.2) BS01 dna 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623538 7eg7:o (6.2) BS02 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623539 7eg7:o (6.2) BS03 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623540 7eg7:o (6.2) BS04 MG 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623541 7eg7:p (6.2) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 33795473
    623542 7eg7:q (6.2) BS01 ZN ? GO:0000428 ... I3LCH3 33795473
    623543 7eg7:w (6.2) BS01 ZN ? GO:0000428 ... P60899 33795473
    623544 7eg7:w (6.2) BS02 ZN ? GO:0000428 ... P60899 33795473
    623545 7eg7:x (6.2) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 33795473
    623546 7eg7:z (6.2) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 33795473
    623547 7eg8:A (7.4) BS01 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623548 7eg8:A (7.4) BS02 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623549 7eg8:P (7.4) BS01 dna ? GO:0000785 ... P20226 33795473
    623550 7eg8:P (7.4) BS02 dna ? GO:0000785 ... P20226 33795473
    623551 7eg8:R (7.4) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623552 7eg8:R (7.4) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623553 7eg8:R (7.4) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 33795473
    623554 7eg8:T (7.4) BS01 dna 3.6.4.12 GO:0003677 ... P13984 33795473
    623555 7eg8:T (7.4) BS02 dna 3.6.4.12 GO:0003677 ... P13984 33795473
    623556 7eg8:o (7.4) BS01 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623557 7eg8:o (7.4) BS02 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623558 7eg8:o (7.4) BS03 MG 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623559 7eg8:p (7.4) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 33795473
    623560 7eg8:q (7.4) BS01 ZN ? GO:0000428 ... I3LCH3 33795473
    623561 7eg8:w (7.4) BS01 ZN ? GO:0000428 ... P60899 33795473
    623562 7eg8:w (7.4) BS02 ZN ? GO:0000428 ... P60899 33795473
    623563 7eg8:x (7.4) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 33795473
    623564 7eg8:z (7.4) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 33795473
    623565 7eg9:A (3.7) BS01 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623566 7eg9:A (3.7) BS02 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623567 7eg9:P (3.7) BS01 dna ? GO:0000785 ... P20226 33795473
    623568 7eg9:P (3.7) BS02 dna ? GO:0000785 ... P20226 33795473
    623569 7eg9:Q (3.7) BS01 dna ? GO:0000979 ... P52655 33795473
    623570 7eg9:R (3.7) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623571 7eg9:R (3.7) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623572 7eg9:R (3.7) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 33795473
    623573 7eg9:U (3.7) BS01 ZN ? GO:0005515 ... P29083 33795473
    623574 7eg9:o (3.7) BS01 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623575 7eg9:o (3.7) BS02 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623576 7eg9:o (3.7) BS03 MG 2.7.7.6 GO:0000428 ... A0A7M4DUC2 33795473
    623577 7eg9:p (3.7) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 33795473
    623578 7eg9:q (3.7) BS01 ZN ? GO:0000428 ... I3LCH3 33795473
    623579 7eg9:w (3.7) BS01 ZN ? GO:0000428 ... P60899 33795473
    623580 7eg9:w (3.7) BS02 ZN ? GO:0000428 ... P60899 33795473
    623581 7eg9:x (3.7) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 33795473
    623582 7eg9:z (3.7) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 33795473
    623583 7ega:A (4.1) BS01 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623584 7ega:A (4.1) BS02 dna 2.3.1.48
    2.7.11.1
    GO:0000122 ... P21675 33795473
    623585 7ega:P (4.1) BS01 dna ? GO:0000785 ... P20226 33795473
    623586 7ega:P (4.1) BS02 dna ? GO:0000785 ... P20226 33795473
    623587 7ega:Q (4.1) BS01 dna ? GO:0000979 ... P52655 33795473
    623588 7ega:R (4.1) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623589 7ega:R (4.1) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 33795473
    623590 7ega:R (4.1) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 33795473
    623591 7ega:T (4.1) BS01 dna 3.6.4.12 GO:0003677 ... P13984 33795473
    623592 7ega:U (4.1) BS01 ZN ? GO:0005515 ... P29083 33795473
    623593 7ega:o (4.1) BS01 ZN 2.7.7.6 GO:0003677 ... A0A7M4DUC2 33795473
    623594 7ega:o (4.1) BS02 ZN 2.7.7.6 GO:0003677 ... A0A7M4DUC2 33795473
    623595 7ega:o (4.1) BS03 MG 2.7.7.6 GO:0003677 ... A0A7M4DUC2 33795473
    623596 7ega:p (4.1) BS01 ZN 2.7.7.6 GO:0000428 ... I3LGP4 33795473
    623597 7ega:q (4.1) BS01 ZN ? GO:0000428 ... I3LCH3 33795473
    623598 7ega:w (4.1) BS01 ZN ? GO:0000428 ... P60899 33795473
    623599 7ega:w (4.1) BS02 ZN ? GO:0000428 ... P60899 33795473
    623600 7ega:x (4.1) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 33795473

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).