SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    62201 1x29:B (2.2) BS02 PMG 2.6.1.1 GO:0003824 ... P00509 15938611
    62202 1x2a:A (2.2) BS01 PDG 2.6.1.1 GO:0003824 ... P00509 15938611
    62203 1x2a:A (2.2) BS02 PDG 2.6.1.1 GO:0003824 ... P00509 15938611
    62204 1x2a:B (2.2) BS01 PDG 2.6.1.1 GO:0003824 ... P00509 15938611
    62205 1x2a:B (2.2) BS02 PDG 2.6.1.1 GO:0003824 ... P00509 15938611
    62206 1x2b:A (2.4) BS01 STX 3.4.11.5 GO:0004177 ... O32449 16452443
    62207 1x2e:A (2.4) BS01 ATX 3.4.11.5 GO:0004177 ... O32449 16452443
    62208 1x2h:A (2.91) BS01 LPA 6.3.1.20 GO:0005737 ... P32099 16043486
    62209 1x2h:B (2.91) BS01 LPA 6.3.1.20 GO:0005737 ... P32099 16043486
    62210 1x2r:A (1.7) BS01 peptide ? N/A Q9Z2X8 16507366
    62211 1x2t:A (1.72) BS01 CA ? GO:0005509 ... Q7LZ71 16165155
    62212 1x2t:B (1.72) BS01 CA ? GO:0005509 ... P23807 16165155
    62213 1x2t:C (1.72) BS01 CA ? GO:0005509 ... Q7LZ71 16165155
    62214 1x2t:D (1.72) BS01 CA ? GO:0005509 ... P23807 16165155
    62215 1x31:A (2.15) BS01 NAD 1.5.3.24 GO:0005737 ... Q50LF0 15946648
    62216 1x31:A (2.15) BS02 FMN 1.5.3.24 GO:0005737 ... Q50LF0 15946648
    62217 1x31:B (2.15) BS01 FAD 1.5.3.24 GO:0005737 ... Q50LF2 15946648
    62218 1x31:B (2.15) BS02 FMN 1.5.3.24 GO:0005737 ... Q50LF2 15946648
    62219 1x31:B (2.15) BS03 DMG 1.5.3.24 GO:0005737 ... Q50LF2 15946648
    62220 1x31:D (2.15) BS01 ZN 1.5.3.24 GO:0005737 ... Q50LF1 15946648
    62221 1x33:A (3.6) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62222 1x33:A (3.6) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62223 1x33:B (3.6) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62224 1x33:B (3.6) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62225 1x33:C (3.6) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62226 1x33:C (3.6) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62227 1x35:A (4.1) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62228 1x35:A (4.1) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62229 1x35:B (4.1) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62230 1x35:B (4.1) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62231 1x35:C (4.1) BS01 CA ? GO:0005198 ... Q9EB06 16204893
    62232 1x35:C (4.1) BS02 CA ? GO:0005198 ... Q9EB06 16204893
    62233 1x36:A (2.7) BS01 CA ? GO:0005198 ... Q9EB06 16204894
    62234 1x38:A (1.698) BS01 XYP 3.2.1.21 GO:0004553 ... Q9XEI3 16342944
    62235 1x38:A (1.698) BS02 IDD 3.2.1.21 GO:0004553 ... Q9XEI3 16342944 MOAD: Ki=1.7nM
    62236 1x39:A (1.8) BS01 XYP 3.2.1.21 GO:0004553 ... Q9XEI3 16342944
    62237 1x39:A (1.8) BS02 IDE 3.2.1.21 GO:0004553 ... Q9XEI3 16342944 MOAD: Ki=0.6nM
    62238 1x3c:A (-1.00) BS01 ZN ? N/A O60281 N/A
    62239 1x3h:A (-1.00) BS01 ZN ? N/A O60711 N/A
    62240 1x3h:A (-1.00) BS02 ZN ? N/A O60711 N/A
    62241 1x3k:A (1.64) BS01 HEM ? GO:0019825 ... Q7M422 17590288
    62242 1x3m:A (2.2) BS01 ADP 2.7.2.15 GO:0005829 ... O06961 16139298
    62243 1x3n:A (2.3) BS01 ANP 2.7.2.15 GO:0005829 ... O06961 16139298
    62244 1x3s:A (1.32) BS01 MG ? GO:0003924 ... Q9NP72 N/A
    62245 1x3s:A (1.32) BS02 GNP ? GO:0003924 ... Q9NP72 N/A
    62246 1x3w:A (3.0) BS01 FRU 3.5.1.52 GO:0000224 ... Q02890 15964983
    62247 1x3w:A (3.0) BS02 GLC 3.5.1.52 GO:0000224 ... Q02890 15964983
    62248 1x3w:A (3.0) BS03 ZN 3.5.1.52 GO:0000224 ... Q02890 15964983
    62249 1x3x:A (1.8) BS01 HEM ? GO:0016020 ... Q17091 16288599
    62250 1x3x:B (1.8) BS01 HEM ? GO:0016020 ... Q17091 16288599
    62251 1x3z:A (2.8) BS01 peptide 3.5.1.52 GO:0000224 ... Q02890 15964983
    62252 1x3z:A (2.8) BS02 GLC 3.5.1.52 GO:0000224 ... Q02890 15964983
    62253 1x3z:A (2.8) BS03 GLC 3.5.1.52 GO:0000224 ... Q02890 15964983
    62254 1x3z:A (2.8) BS04 FRU 3.5.1.52 GO:0000224 ... Q02890 15964983
    62255 1x3z:A (2.8) BS05 ZN 3.5.1.52 GO:0000224 ... Q02890 15964983
    62256 1x46:A (1.5) BS01 HEM ? GO:0005576 ... Q7M421 17590288
    62257 1x4i:A (-1.00) BS01 ZN ? N/A Q9NXR8 N/A
    62258 1x4i:A (-1.00) BS02 ZN ? N/A Q9NXR8 N/A
    62259 1x4j:A (-1.00) BS01 ZN 2.3.2.27 N/A Q9H0F5 N/A
    62260 1x4j:A (-1.00) BS02 ZN 2.3.2.27 N/A Q9H0F5 N/A
    62261 1x4k:A (-1.00) BS01 ZN ? N/A Q14192 N/A
    62262 1x4k:A (-1.00) BS02 ZN ? N/A Q14192 N/A
    62263 1x4l:A (-1.00) BS01 ZN ? N/A Q14192 N/A
    62264 1x4l:A (-1.00) BS02 ZN ? N/A Q14192 N/A
    62265 1x4s:A (-1.00) BS01 ZN ? N/A Q9UHR6 17656577
    62266 1x4s:A (-1.00) BS02 ZN ? N/A Q9UHR6 17656577
    62267 1x4u:A (-1.00) BS01 ZN ? GO:0016192 ... Q5T4F4 N/A
    62268 1x4u:A (-1.00) BS02 ZN ? GO:0016192 ... Q5T4F4 N/A
    62269 1x4v:A (-1.00) BS01 ZN ? GO:0008270 ... Q8WV99 N/A
    62270 1x4v:A (-1.00) BS02 ZN ? GO:0008270 ... Q8WV99 N/A
    62271 1x4w:A (-1.00) BS01 ZN ? GO:0008270 ... Q9H8U3 N/A
    62272 1x4w:A (-1.00) BS02 ZN ? GO:0008270 ... Q9H8U3 N/A
    62273 1x54:A (1.45) BS01 4AD 6.1.1.22 GO:0000166 ... O57980 16753178
    62274 1x55:A (1.8) BS01 NSS 6.1.1.22 GO:0000166 ... O57980 16753178
    62275 1x5w:A (-1.00) BS01 ZN ? N/A Q9NTW7 N/A
    62276 1x5w:A (-1.00) BS02 ZN ? N/A Q9NTW7 N/A
    62277 1x61:A (-1.00) BS01 ZN ? N/A Q15654 N/A
    62278 1x61:A (-1.00) BS02 ZN ? N/A Q15654 N/A
    62279 1x62:A (-1.00) BS01 ZN ? N/A O00151 N/A
    62280 1x62:A (-1.00) BS02 ZN ? N/A O00151 N/A
    62281 1x63:A (-1.00) BS01 ZN ? GO:0007517 ... Q13642 N/A
    62282 1x63:A (-1.00) BS02 ZN ? GO:0007517 ... Q13642 N/A
    62283 1x64:A (-1.00) BS01 ZN ? N/A O70209 N/A
    62284 1x64:A (-1.00) BS02 ZN ? N/A O70209 N/A
    62285 1x6e:A (-1.00) BS01 ZN ? N/A P17028 N/A
    62286 1x6e:A (-1.00) BS02 ZN ? N/A P17028 N/A
    62287 1x6f:A (-1.00) BS01 ZN ? N/A Q96JM2 N/A
    62288 1x6h:A (-1.00) BS01 ZN ? N/A P49711 N/A
    62289 1x6h:A (-1.00) BS02 ZN ? N/A P49711 N/A
    62290 1x6m:A (2.35) BS01 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62291 1x6m:A (2.35) BS02 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62292 1x6m:B (2.35) BS01 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62293 1x6m:B (2.35) BS02 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62294 1x6m:C (2.35) BS01 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62295 1x6m:C (2.35) BS02 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62296 1x6m:D (2.35) BS01 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62297 1x6m:D (2.35) BS02 ZN 4.4.1.22 GO:0008270 ... Q51669 15548539
    62298 1x6n:A (2.0) BS01 AMI 3.2.1.14 GO:0004553 ... P07254 N/A
    62299 1x6u:A (2.7) BS01 DO8 2.5.1.55 GO:0005737 ... P0A715 16023668
    62300 1x6v:B (1.75) BS01 ADP 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    62301 1x70:A (2.1) BS01 715 3.4.14.5 GO:0001618 ... P27487 15634008 MOAD: ic50=18nM
    BindingDB: IC50=18nM, Kd=1.3nM
    62302 1x70:B (2.1) BS01 715 3.4.14.5 GO:0001618 ... P27487 15634008 MOAD: ic50=18nM
    BindingDB: IC50=18nM, Kd=1.3nM
    62303 1x71:A (2.1) BS01 DB1 ? GO:0002020 ... P80188 15642259
    62304 1x71:A (2.1) BS02 DB1 ? GO:0002020 ... P80188 15642259
    62305 1x71:B (2.1) BS01 DB1 ? GO:0002020 ... P80188 15642259
    62306 1x71:B (2.1) BS02 DB1 ? GO:0002020 ... P80188 15642259
    62307 1x71:C (2.1) BS01 DB1 ? GO:0002020 ... P80188 15642259
    62308 1x76:A (2.2) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62309 1x76:A (2.2) BS02 697 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=1.9nM
    BindingDB: IC50=2.2nM
    62310 1x76:B (2.2) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62311 1x76:B (2.2) BS02 697 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=1.9nM
    BindingDB: IC50=2.2nM
    62312 1x77:A (2.7) BS01 FMN 1.-.-.- GO:0003955 ... Q9I4D4 16552139
    62313 1x77:A (2.7) BS02 FMN 1.-.-.- GO:0003955 ... Q9I4D4 16552139
    62314 1x77:B (2.7) BS01 FMN 1.-.-.- GO:0003955 ... Q9I4D4 16552139
    62315 1x77:B (2.7) BS02 FMN 1.-.-.- GO:0003955 ... Q9I4D4 16552139
    62316 1x78:A (2.3) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62317 1x78:A (2.3) BS02 244 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    62318 1x78:B (2.3) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62319 1x78:B (2.3) BS02 244 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=14nM
    BindingDB: IC50=14nM
    62320 1x7a:C (2.9) BS01 187 3.4.21.22 GO:0004252 ... P16293 15454208
    62321 1x7b:A (2.3) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62322 1x7b:A (2.3) BS02 041 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=4.1nM
    BindingDB: IC50=5nM
    62323 1x7b:B (2.3) BS01 peptide ? GO:0003677 ... Q92731 15548008
    62324 1x7b:B (2.3) BS02 041 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=4.1nM
    BindingDB: IC50=5nM
    62325 1x7d:A (1.6) BS01 NAD 4.3.1.12 GO:0008473 ... Q88H32 15518536
    62326 1x7d:A (1.6) BS02 ORN 4.3.1.12 GO:0008473 ... Q88H32 15518536
    62327 1x7d:B (1.6) BS01 ORN 4.3.1.12 GO:0008473 ... Q88H32 15518536
    62328 1x7d:B (1.6) BS02 NAD 4.3.1.12 GO:0008473 ... Q88H32 15518536
    62329 1x7e:A (2.8) BS01 peptide ? N/A P03372 15548008
    62330 1x7e:A (2.8) BS02 244 ? N/A P03372 15548008 BindingDB: IC50=1152nM
    62331 1x7e:B (2.8) BS01 peptide ? N/A P03372 15548008
    62332 1x7e:B (2.8) BS02 244 ? N/A P03372 15548008 BindingDB: IC50=1152nM
    62333 1x7g:A (2.3) BS01 NAP 1.3.1.- GO:0006629 ... P16544 15544323
    62334 1x7g:B (2.3) BS01 NAP 1.3.1.- GO:0006629 ... P16544 15544323
    62335 1x7h:A (2.3) BS01 NDP 1.3.1.- GO:0006629 ... P16544 15544323
    62336 1x7h:B (2.3) BS01 NDP 1.3.1.- GO:0006629 ... P16544 15544323
    62337 1x7i:B (1.7) BS01 CA ? GO:0005507 ... P67825 15624211
    62338 1x7j:A (2.3) BS01 peptide ? GO:0003677 ... Q92731 15576033
    62339 1x7j:A (2.3) BS02 GEN ? GO:0003677 ... Q92731 15576033 MOAD: ic50=9nM
    BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    62340 1x7j:B (2.3) BS01 peptide ? GO:0003677 ... Q92731 15576033
    62341 1x7j:B (2.3) BS02 GEN ? GO:0003677 ... Q92731 15576033 MOAD: ic50=9nM
    BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    62342 1x7n:A (1.89) BS01 MN 5.3.1.9 GO:0004347 ... P83194 15465052
    62343 1x7n:A (1.89) BS02 PA5 5.3.1.9 GO:0004347 ... P83194 15465052
    62344 1x7p:A (2.55) BS01 SAM 2.1.1.208 GO:0003723 ... Q9F5K6 15581897
    62345 1x7p:B (2.55) BS01 SAM 2.1.1.208 GO:0003723 ... Q9F5K6 15581897
    62346 1x7q:A (1.45) BS01 peptide ? N/A P04439 16041067
    62347 1x7r:A (2.0) BS01 peptide ? N/A P03372 15576033
    62348 1x7r:A (2.0) BS02 GEN ? N/A P03372 15576033 MOAD: ic50=360nM
    BindingDB: IC50=395nM, EC50=240nM, Ki=370nM
    62349 1x7w:A (1.73) BS01 MN 1.2.4.4 GO:0003863 ... P12694 15576032
    62350 1x7w:A (1.73) BS02 TPP 1.2.4.4 GO:0003863 ... P12694 15576032
    62351 1x7x:A (2.1) BS01 MN 1.2.4.4 GO:0003863 ... P12694 15576032
    62352 1x7x:A (2.1) BS02 TPP 1.2.4.4 GO:0003863 ... P12694 15576032
    62353 1x7y:A (1.57) BS01 MN 1.2.4.4 GO:0003863 ... P12694 15576032
    62354 1x7y:A (1.57) BS02 TPP 1.2.4.4 GO:0003863 ... P12694 15576032
    62355 1x7z:A (1.72) BS01 MN 1.2.4.4 GO:0003863 ... P12694 15576032
    62356 1x7z:A (1.72) BS02 TPP 1.2.4.4 GO:0003863 ... P12694 15576032
    62357 1x80:A (2.0) BS01 MN 1.2.4.4 GO:0003863 ... P12694 15576032
    62358 1x80:A (2.0) BS02 TPP 1.2.4.4 GO:0003863 ... P12694 15576032
    62359 1x81:B (3.5) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 15454228
    62360 1x81:B (3.5) BS02 JAN 2.5.1.58 GO:0003824 ... Q02293 15454228
    62361 1x82:A (1.5) BS01 PA5 5.3.1.9 GO:0004347 ... P83194 15465052
    62362 1x83:A (1.8) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    62363 1x83:A (1.8) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    62364 1x83:A (1.8) BS03 SBH 5.3.3.2 GO:0000287 ... Q46822 15643873
    62365 1x83:B (1.8) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    62366 1x83:B (1.8) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    62367 1x83:B (1.8) BS03 SBH 5.3.3.2 GO:0000287 ... Q46822 15643873
    62368 1x84:A (1.78) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    62369 1x84:A (1.78) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    62370 1x84:A (1.78) BS03 SBH 5.3.3.2 GO:0000287 ... Q46822 15643873
    62371 1x84:B (1.78) BS01 MN 5.3.3.2 GO:0000287 ... Q46822 15643873
    62372 1x84:B (1.78) BS02 MG 5.3.3.2 GO:0000287 ... Q46822 15643873
    62373 1x84:B (1.78) BS03 SBH 5.3.3.2 GO:0000287 ... Q46822 15643873
    62374 1x87:A (2.4) BS01 NAD 4.2.1.49 GO:0005737 ... Q5L084 N/A
    62375 1x87:B (2.4) BS01 NAD 4.2.1.49 GO:0005737 ... Q5L084 N/A
    62376 1x88:A (1.8) BS01 ADP ? GO:0003777 ... P52732 N/A
    62377 1x88:A (1.8) BS02 NAT ? GO:0003777 ... P52732 N/A BindingDB: IC50=10000nM
    62378 1x88:B (1.8) BS01 ADP ? GO:0003777 ... P52732 N/A
    62379 1x88:B (1.8) BS02 NAT ? GO:0003777 ... P52732 N/A BindingDB: IC50=10000nM
    62380 1x89:A (2.1) BS01 CM1 ? GO:0002020 ... P80188 15642259
    62381 1x89:B (2.1) BS01 CM1 ? GO:0002020 ... P80188 15642259
    62382 1x89:C (2.1) BS01 CM1 ? GO:0002020 ... P80188 15642259
    62383 1x8b:A (1.81) BS01 MG 2.7.10.2 GO:0004672 ... P30291 15837193
    62384 1x8b:A (1.81) BS02 MG 2.7.10.2 GO:0004672 ... P30291 15837193
    62385 1x8b:A (1.81) BS03 824 2.7.10.2 GO:0004672 ... P30291 15837193 MOAD: ic50=97nM
    BindingDB: IC50=97nM
    62386 1x8c:B (2.1) BS01 CA ? GO:0005507 ... P67825 15624211
    62387 1x8d:A (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    62388 1x8d:B (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    62389 1x8d:C (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    62390 1x8d:D (1.8) BS01 RNS 5.1.3.32 GO:0005737 ... P32156 15876375 MOAD: Kd=6.16mM
    62391 1x8g:A (1.7) BS01 ZN 3.5.2.6 GO:0008270 ... P26918 15588826
    62392 1x8g:A (1.7) BS02 CO3 3.5.2.6 GO:0008270 ... P26918 15588826
    62393 1x8h:A (1.6) BS01 ZN 3.5.2.6 GO:0008270 ... P26918 15588826
    62394 1x8h:A (1.6) BS02 CO3 3.5.2.6 GO:0008270 ... P26918 15588826
    62395 1x8i:A (1.9) BS01 ZN 3.5.2.6 GO:0008270 ... P26918 15588826
    62396 1x8i:A (1.9) BS02 BMH 3.5.2.6 GO:0008270 ... P26918 15588826
    62397 1x8j:A (2.35) BS01 CA ? GO:0008146 ... Q26490 15608121
    62398 1x8j:A (2.35) BS02 A3P ? GO:0008146 ... Q26490 15608121
    62399 1x8j:A (2.35) BS03 AOI ? GO:0008146 ... Q26490 15608121 MOAD: Ki=0.11uM
    62400 1x8j:B (2.35) BS01 A3P ? GO:0008146 ... Q26490 15608121

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).