SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3135 3136 3137 3138 3139 3140 3141 3142 3143 3144 3145 3146 3147 3148 3149 3150 3151 3152 3153 3154 3155 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    628801 7f74:B (2.0) BS02 FMN ? GO:0000166 ... O05773 36750726
    628802 7f74:C (2.0) BS01 FMN ? GO:0000166 ... O05773 36750726
    628803 7f74:D (2.0) BS01 FMN ? GO:0000166 ... O05773 36750726
    628804 7f75:C (4.2) BS01 dna 2.7.7.6 GO:0000428 ... P37870 34530448
    628805 7f75:C (4.2) BS02 dna 2.7.7.6 GO:0000428 ... P37870 34530448
    628806 7f75:D (4.2) BS01 dna 2.7.7.6 GO:0000287 ... P37871 34530448
    628807 7f75:D (4.2) BS02 dna 2.7.7.6 GO:0000287 ... P37871 34530448
    628808 7f75:D (4.2) BS03 MG 2.7.7.6 GO:0000287 ... P37871 34530448
    628809 7f75:D (4.2) BS04 ZN 2.7.7.6 GO:0000287 ... P37871 34530448
    628810 7f75:D (4.2) BS05 ZN 2.7.7.6 GO:0000287 ... P37871 34530448
    628811 7f75:F (4.2) BS01 dna ? GO:0003677 ... P06224 34530448
    628812 7f75:F (4.2) BS02 dna ? GO:0003677 ... P06224 34530448
    628813 7f75:G (4.2) BS01 dna ? GO:0005515 ... O31602 34530448
    628814 7f75:G (4.2) BS02 dna ? GO:0005515 ... O31602 34530448
    628815 7f76:A (1.57) BS01 FMN ? GO:0000166 ... A0A223KLJ1 N/A
    628816 7f76:B (1.57) BS01 FMN ? GO:0000166 ... A0A223KLJ1 N/A
    628817 7f79:A (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628818 7f79:A (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628819 7f79:B (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628820 7f79:B (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628821 7f79:C (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628822 7f79:C (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628823 7f79:D (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628824 7f79:D (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628825 7f79:E (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628826 7f79:E (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628827 7f79:F (2.7) BS01 NDP ? GO:0000166 ... A0A1D8PMH8 34271431
    628828 7f79:F (2.7) BS02 AKG ? GO:0000166 ... A0A1D8PMH8 34271431
    628829 7f7a:A (2.7) BS01 ADE N/A GO:0009279 ... N/A N/A
    628830 7f7a:A (2.7) BS02 MG N/A GO:0009279 ... N/A N/A
    628831 7f7b:A (2.34) BS01 MG N/A GO:0009279 ... N/A N/A
    628832 7f7c:A (2.2) BS01 ADN N/A GO:0009279 ... N/A N/A
    628833 7f7c:A (2.2) BS02 MG N/A GO:0009279 ... N/A N/A
    628834 7f7d:A (2.2) BS01 ADN N/A GO:0009279 ... N/A N/A
    628835 7f7d:A (2.2) BS02 MG N/A GO:0009279 ... N/A N/A
    628836 7f7f:A (3.81) BS01 MG 7.6.2.1 GO:0000166 ... P32660 35294892
    628837 7f7g:A (2.446) BS01 peptide ? N/A P31016 34458841
    628838 7f7g:B (2.446) BS01 peptide ? N/A P31016 34458841
    628839 7f7i:A (2.595) BS01 peptide ? N/A P31016 34458841
    628840 7f7i:B (2.595) BS01 peptide ? N/A P31016 34458841
    628841 7f7i:B (2.595) BS02 peptide ? N/A P31016 34458841
    628842 7f7i:C (2.595) BS01 peptide ? N/A P31016 34458841
    628843 7f7i:D (2.595) BS01 peptide ? N/A P31016 34458841
    628844 7f7i:D (2.595) BS02 peptide ? N/A P31016 34458841
    628845 7f7i:E (2.595) BS01 peptide ? N/A P31016 34458841
    628846 7f7i:E (2.595) BS02 peptide ? N/A P31016 34458841
    628847 7f7i:F (2.595) BS01 peptide ? N/A P31016 34458841
    628848 7f7i:F (2.595) BS02 peptide ? N/A P31016 34458841
    628849 7f7k:A (2.36) BS01 NAP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628850 7f7k:B (2.36) BS01 NAP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628851 7f7l:A (2.25) BS01 NDP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628852 7f7l:B (2.25) BS01 NDP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628853 7f7m:A (2.47) BS01 GPJ ? GO:0000166 ... A0A5J6VLZ7 N/A
    628854 7f7m:A (2.47) BS02 NAP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628855 7f7m:B (2.47) BS01 NAP ? GO:0000166 ... A0A5J6VLZ7 N/A
    628856 7f7o:A (2.8) BS01 peptide ? GO:0008013 ... P25054 N/A
    628857 7f7o:A (2.8) BS02 4CI ? GO:0008013 ... P25054 N/A
    628858 7f7q:A (1.42) BS01 NPO ? GO:0003824 ... Q833V2 34826537
    628859 7f7r:A (1.63) BS01 SER ? GO:0003824 ... Q833V2 34826537
    628860 7f7r:A (1.63) BS02 CA ? GO:0003824 ... Q833V2 34826537
    628861 7f7w:A (1.83) BS01 36H 2.7.10.2 GO:0004672 ... O60674 35256594
    628862 7f7w:B (1.83) BS01 36H 2.7.10.2 GO:0004672 ... O60674 35256594
    628863 7f80:A (2.8) BS01 1KF ? GO:0003677 ... Q03181 N/A
    628864 7f80:B (2.8) BS01 1KF ? GO:0003677 ... Q03181 N/A
    628865 7f82:A (1.3) BS01 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628866 7f82:A (1.3) BS02 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628867 7f82:A (1.3) BS03 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628868 7f82:A (1.3) BS04 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628869 7f82:A (1.3) BS05 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628870 7f82:A (1.3) BS06 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628871 7f82:A (1.3) BS07 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628872 7f82:B (1.3) BS01 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628873 7f82:B (1.3) BS02 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628874 7f82:B (1.3) BS03 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628875 7f82:B (1.3) BS04 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628876 7f82:C (1.3) BS01 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628877 7f82:C (1.3) BS02 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628878 7f82:C (1.3) BS03 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628879 7f82:C (1.3) BS04 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628880 7f82:C (1.3) BS05 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628881 7f82:C (1.3) BS06 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628882 7f82:C (1.3) BS07 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628883 7f82:D (1.3) BS01 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628884 7f82:D (1.3) BS02 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628885 7f82:D (1.3) BS03 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628886 7f82:D (1.3) BS04 BGC 3.2.1.-
    3.2.1.4
    GO:0004553 ... K0IUV6 N/A
    628887 7f83:A (2.94) BS01 1KQ ? GO:0004930 ... P0ABE7
    Q92847
    35027551
    628888 7f83:B (2.94) BS01 1KQ ? GO:0004930 ... P0ABE7
    Q92847
    35027551
    628889 7f86:A (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628890 7f86:A (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628891 7f86:A (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628892 7f86:A (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628893 7f86:B (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628894 7f86:B (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628895 7f86:B (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628896 7f86:B (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628897 7f86:C (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628898 7f86:C (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628899 7f86:C (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628900 7f86:C (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628901 7f86:D (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628902 7f86:D (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628903 7f86:D (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628904 7f86:D (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628905 7f86:E (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628906 7f86:E (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628907 7f86:E (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628908 7f86:F (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628909 7f86:F (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628910 7f86:F (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628911 7f86:F (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628912 7f86:G (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628913 7f86:G (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628914 7f86:G (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628915 7f86:G (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628916 7f86:H (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628917 7f86:H (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628918 7f86:H (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628919 7f86:H (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628920 7f86:I (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628921 7f86:I (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628922 7f86:I (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628923 7f86:I (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628924 7f86:J (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628925 7f86:J (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628926 7f86:J (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628927 7f86:J (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628928 7f86:K (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628929 7f86:K (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628930 7f86:K (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628931 7f86:K (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628932 7f86:L (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628933 7f86:L (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628934 7f86:L (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628935 7f86:L (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628936 7f86:M (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628937 7f86:M (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628938 7f86:M (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628939 7f86:M (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628940 7f86:N (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628941 7f86:N (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628942 7f86:N (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628943 7f86:N (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628944 7f86:O (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628945 7f86:O (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628946 7f86:O (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628947 7f86:O (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628948 7f86:P (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628949 7f86:P (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628950 7f86:P (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628951 7f86:P (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628952 7f86:Q (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628953 7f86:Q (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628954 7f86:Q (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628955 7f86:R (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628956 7f86:R (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628957 7f86:R (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628958 7f86:T (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628959 7f86:T (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628960 7f86:T (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628961 7f86:U (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628962 7f86:U (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628963 7f86:U (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628964 7f86:U (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628965 7f86:V (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628966 7f86:V (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628967 7f86:V (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628968 7f86:V (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628969 7f86:W (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628970 7f86:W (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628971 7f86:W (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628972 7f86:W (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628973 7f86:X (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628974 7f86:X (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628975 7f86:X (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IW87 35354393
    628976 7f86:Y (2.21) BS01 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628977 7f86:Y (2.21) BS02 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628978 7f86:Y (2.21) BS03 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628979 7f86:Y (2.21) BS04 PEB ? GO:0009579 ... A0A1W1IVY1 35354393
    628980 7f87:A (1.69) BS01 peptide ? N/A A0A0E3D3H8 N/A
    628981 7f87:B (1.69) BS01 peptide ? N/A A0A0E3D3H8 N/A
    628982 7f8b:A (2.248) BS01 SAM ? GO:0000154 ... Q79N53 35007529
    628983 7f8c:A (2.248) BS01 SFG ? GO:0000154 ... Q79N53 35007529
    628984 7f8d:A (2.4) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 34850194
    628985 7f8d:B (2.4) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 34850194
    628986 7f8d:C (2.4) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 34850194
    628987 7f8d:D (2.4) BS01 NAD 1.1.1.37 GO:0000166 ... A0A143T1U9 34850194
    628988 7f8g:A (3.491) BS01 1RI 3.1.3.48 GO:0004725 ... O00167 34761455
    628989 7f8g:B (3.491) BS01 1RI 3.1.3.48 GO:0004725 ... O00167 34761455
    628990 7f8h:A (3.3) BS01 1SI 3.1.3.48 GO:0004725 ... O00167 34761455
    628991 7f8h:B (3.3) BS01 1SI 3.1.3.48 GO:0004725 ... O00167 34761455
    628992 7f8h:C (3.3) BS01 1SI 3.1.3.48 GO:0004725 ... O00167 34761455
    628993 7f8j:A (3.6) BS01 LBN ? GO:0002020 ... Q96RD7 35133866
    628994 7f8j:A (3.6) BS02 LBN ? GO:0002020 ... Q96RD7 35133866
    628995 7f8j:A (3.6) BS03 LBN ? GO:0002020 ... Q96RD7 35133866
    628996 7f8j:A (3.6) BS04 LBN ? GO:0002020 ... Q96RD7 35133866
    628997 7f8j:A (3.6) BS05 LBN ? GO:0002020 ... Q96RD7 35133866
    628998 7f8j:A (3.6) BS06 LBN ? GO:0002020 ... Q96RD7 35133866
    628999 7f8j:B (3.6) BS01 LBN ? GO:0002020 ... Q96RD7 35133866
    629000 7f8j:B (3.6) BS02 LBN ? GO:0002020 ... Q96RD7 35133866

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).