SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    62801 1xdu:A (2.7) BS01 SFG 4.1.1.- GO:0003824 ... Q54527 15548527
    62802 1xe4:A (1.95) BS01 MG 2.3.2.10 GO:0009252 ... Q9EY50 15901708
    62803 1xe5:A (2.4) BS01 5FE 3.4.23.39 GO:0004190 ... P46925 N/A
    62804 1xe5:B (2.4) BS01 5FE 3.4.23.39 GO:0004190 ... P46925 N/A
    62805 1xe6:A (2.8) BS01 5FP 3.4.23.39 GO:0004190 ... P46925 N/A
    62806 1xe6:B (2.8) BS01 5FP 3.4.23.39 GO:0004190 ... P46925 N/A
    62807 1xe8:A (2.8) BS01 ADE ? GO:0003674 ... Q03629 15608122
    62808 1xed:A (1.9) BS01 MG ? N/A P01833 15530357
    62809 1xed:B (1.9) BS01 MG ? N/A P01833 15530357
    62810 1xef:A (2.5) BS01 ATP ? GO:0005524 ... P08716 15889153
    62811 1xef:A (2.5) BS02 ATP ? GO:0005524 ... P08716 15889153
    62812 1xef:B (2.5) BS01 ATP ? GO:0005524 ... P08716 15889153
    62813 1xef:B (2.5) BS02 ATP ? GO:0005524 ... P08716 15889153
    62814 1xef:C (2.5) BS01 ATP ? GO:0005524 ... P08716 15889153
    62815 1xef:C (2.5) BS02 ATP ? GO:0005524 ... P08716 15889153
    62816 1xef:D (2.5) BS01 ATP ? GO:0005524 ... P08716 15889153
    62817 1xef:D (2.5) BS02 ATP ? GO:0005524 ... P08716 15889153
    62818 1xeg:A (1.81) BS01 ACT 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 18323598
    62819 1xeg:A (1.81) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 18323598
    62820 1xel:A (1.8) BS01 NAD 5.1.3.2 GO:0003978 ... P09147 8611497
    62821 1xel:A (1.8) BS02 UPG 5.1.3.2 GO:0003978 ... P09147 8611497
    62822 1xem:A (1.76) BS01 ZN 3.5.1.88 GO:0005515 ... P0A6K3 15796505
    62823 1xen:A (1.85) BS01 FE 3.5.1.88 GO:0005515 ... P0A6K3 15796505
    62824 1xeo:A (1.3) BS01 CO 3.5.1.88 GO:0005515 ... P0A6K3 15796505
    62825 1xep:A (1.55) BS01 CAQ 3.2.1.17 GO:0003796 ... P00720 15916423
    62826 1xer:A (2.0) BS01 ZN ? GO:0008270 ... P55907 8836097
    62827 1xer:A (2.0) BS02 F3S ? GO:0008270 ... P55907 8836097
    62828 1xer:A (2.0) BS03 F3S ? GO:0008270 ... P55907 8836097
    62829 1xes:A (1.7) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62830 1xes:B (1.7) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62831 1xes:C (1.7) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62832 1xes:D (1.7) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62833 1xet:B (2.0) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62834 1xet:C (2.0) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62835 1xet:D (2.0) BS01 3IO 2.3.1.146 GO:0005737 ... Q02323 N/A
    62836 1xet:D (2.0) BS02 MCA 2.3.1.146 GO:0005737 ... Q02323 N/A
    62837 1xev:A (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    62838 1xev:B (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    62839 1xev:C (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    62840 1xev:D (2.2) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    62841 1xex:A (2.5) BS01 MG ? N/A Q8TZY2 15458651
    62842 1xex:A (2.5) BS02 ATP ? N/A Q8TZY2 15458651
    62843 1xey:A (2.05) BS01 PLP 4.1.1.15 GO:0004351 ... P69908 15735332
    62844 1xey:A (2.05) BS02 GUA 4.1.1.15 GO:0004351 ... P69908 15735332
    62845 1xey:A (2.05) BS03 PLP 4.1.1.15 GO:0004351 ... P69908 15735332
    62846 1xey:A (2.05) BS04 GUA 4.1.1.15 GO:0004351 ... P69908 15735332
    62847 1xey:B (2.05) BS01 PLP 4.1.1.15 GO:0004351 ... P69908 15735332
    62848 1xey:B (2.05) BS02 GUA 4.1.1.15 GO:0004351 ... P69908 15735332
    62849 1xey:B (2.05) BS03 PLP 4.1.1.15 GO:0004351 ... P69908 15735332
    62850 1xey:B (2.05) BS04 GUA 4.1.1.15 GO:0004351 ... P69908 15735332
    62851 1xez:A (2.3) BS01 BOG ? GO:0005576 ... P09545 15978620
    62852 1xf0:A (2.0) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 15087468
    62853 1xf0:A (2.0) BS02 ASD 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 15087468
    62854 1xf1:A (1.9) BS01 CA 3.4.21.110 GO:0004252 ... P15926 16344483
    62855 1xf1:B (1.9) BS01 CA 3.4.21.110 GO:0004252 ... P15926 16344483
    62856 1xf2:H (2.3) BS01 dna N/A N/A N/A 15784256
    62857 1xf2:L (2.3) BS01 dna N/A GO:0002250 ... P01837 15784256
    62858 1xf5:A (2.6) BS01 peptide N/A N/A N/A 15930632
    62859 1xf5:B (2.6) BS01 peptide N/A N/A N/A 15930632
    62860 1xf5:C (2.6) BS01 peptide N/A N/A N/A 15930632
    62861 1xf5:D (2.6) BS01 peptide N/A N/A N/A 15930632
    62862 1xf6:A (1.1) BS01 DBV ? GO:0030089 ... Q00433 15504407
    62863 1xf6:A (1.1) BS02 PEB ? GO:0030089 ... Q00433 15504407
    62864 1xf6:A (1.1) BS03 PEB ? GO:0030089 ... Q00433 15504407
    62865 1xf6:A (1.1) BS04 PEB ? GO:0030089 ... Q00433 15504407
    62866 1xf6:B (1.1) BS01 DBV ? GO:0030089 ... P30943 15504407
    62867 1xf6:B (1.1) BS02 DBV ? GO:0030089 ... P30943 15504407
    62868 1xf6:B (1.1) BS03 PEB ? GO:0030089 ... P30943 15504407
    62869 1xf6:B (1.1) BS04 PEB ? GO:0030089 ... P30943 15504407
    62870 1xf6:C (1.1) BS01 PEB ? GO:0009535 ... P27198 15504407
    62871 1xf6:C (1.1) BS02 PEB ? GO:0009535 ... P27198 15504407
    62872 1xf6:C (1.1) BS03 PEB ? GO:0009535 ... P27198 15504407
    62873 1xf6:D (1.1) BS01 DBV ? GO:0009535 ... P27198 15504407
    62874 1xf6:D (1.1) BS02 PEB ? GO:0009535 ... P27198 15504407
    62875 1xf6:D (1.1) BS03 PEB ? GO:0009535 ... P27198 15504407
    62876 1xf6:D (1.1) BS04 PEB ? GO:0009535 ... P27198 15504407
    62877 1xf8:A (1.9) BS01 MG 2.3.2.10 GO:0009252 ... Q9EY50 15901708
    62878 1xf9:A (2.7) BS01 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62879 1xf9:B (2.7) BS01 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62880 1xf9:B (2.7) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62881 1xf9:C (2.7) BS01 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62882 1xf9:C (2.7) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62883 1xf9:D (2.7) BS01 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62884 1xf9:D (2.7) BS02 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62885 1xf9:D (2.7) BS03 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62886 1xfa:A (3.1) BS01 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62887 1xfa:A (3.1) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62888 1xfa:B (3.1) BS01 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62889 1xfa:B (3.1) BS02 MG 5.6.1.6 GO:0005524 ... P26361 15619636
    62890 1xfa:B (3.1) BS03 ATP 5.6.1.6 GO:0005524 ... P26361 15619636
    62891 1xfc:A (1.9) BS01 PLP 5.1.1.1 GO:0003824 ... P9WQA9 15683232
    62892 1xfc:B (1.9) BS01 PLP 5.1.1.1 GO:0003824 ... P9WQA9 15683232
    62893 1xfe:A (-1.00) BS01 CA ? GO:0005509 ... P01130 15494314
    62894 1xfe:A (-1.00) BS02 CA ? GO:0005509 ... P01130 15494314
    62895 1xff:A (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    62896 1xff:B (1.8) BS01 GLU 2.6.1.16 N/A P17169 8805567 MOAD: Ki=15uM
    62897 1xfg:A (1.85) BS01 HGA 2.6.1.16 N/A P17169 8805567
    62898 1xfg:B (1.85) BS01 HGA 2.6.1.16 N/A P17169 8805567
    62899 1xfi:A (1.7) BS01 MG 3.1.3.- GO:0004594 ... Q949P3 16511115
    62900 1xfo:A (1.96) BS01 ZN 3.4.11.- N/A O59196 15375159
    62901 1xfo:A (1.96) BS02 ZN 3.4.11.- N/A O59196 15375159
    62902 1xfo:B (1.96) BS01 ZN 3.4.11.- N/A O59196 15375159
    62903 1xfo:B (1.96) BS02 ZN 3.4.11.- N/A O59196 15375159
    62904 1xfo:C (1.96) BS01 ZN 3.4.11.- N/A O59196 15375159
    62905 1xfo:C (1.96) BS02 ZN 3.4.11.- N/A O59196 15375159
    62906 1xfo:D (1.96) BS01 ZN 3.4.11.- N/A O59196 15375159
    62907 1xfo:D (1.96) BS02 ZN 3.4.11.- N/A O59196 15375159
    62908 1xfu:A (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62909 1xfu:B (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62910 1xfu:C (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62911 1xfu:D (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62912 1xfu:E (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62913 1xfu:F (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62914 1xfu:O (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62915 1xfu:O (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62916 1xfu:O (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62917 1xfu:P (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62918 1xfu:P (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62919 1xfu:P (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62920 1xfu:Q (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62921 1xfu:Q (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62922 1xfu:Q (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62923 1xfu:R (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62924 1xfu:R (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62925 1xfu:R (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62926 1xfu:S (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62927 1xfu:S (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62928 1xfu:S (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62929 1xfu:T (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62930 1xfu:T (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62931 1xfu:T (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62932 1xfv:A (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62933 1xfv:A (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62934 1xfv:B (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62935 1xfv:B (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62936 1xfv:C (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62937 1xfv:C (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62938 1xfv:D (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62939 1xfv:D (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62940 1xfv:E (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62941 1xfv:E (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62942 1xfv:F (3.35) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62943 1xfv:F (3.35) BS02 3AT 4.6.1.1 GO:0003824 ... P40136 15719022
    62944 1xfv:O (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62945 1xfv:O (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62946 1xfv:O (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62947 1xfv:P (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62948 1xfv:P (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62949 1xfv:P (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62950 1xfv:Q (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62951 1xfv:Q (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62952 1xfv:Q (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62953 1xfv:R (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62954 1xfv:R (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62955 1xfv:R (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62956 1xfv:S (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62957 1xfv:S (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62958 1xfv:S (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62959 1xfv:T (3.35) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62960 1xfv:T (3.35) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62961 1xfv:T (3.35) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62962 1xfw:A (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62963 1xfw:A (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62964 1xfw:B (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62965 1xfw:B (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62966 1xfw:C (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62967 1xfw:C (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62968 1xfw:D (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62969 1xfw:D (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62970 1xfw:E (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62971 1xfw:E (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62972 1xfw:F (3.4) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62973 1xfw:F (3.4) BS02 CMP 4.6.1.1 GO:0003824 ... P40136 15719022
    62974 1xfw:O (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62975 1xfw:O (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62976 1xfw:O (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62977 1xfw:P (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62978 1xfw:P (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62979 1xfw:P (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62980 1xfw:Q (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62981 1xfw:Q (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62982 1xfw:Q (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62983 1xfw:R (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62984 1xfw:R (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62985 1xfw:R (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62986 1xfw:S (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62987 1xfw:S (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62988 1xfw:S (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62989 1xfw:T (3.4) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62990 1xfw:T (3.4) BS02 CA ? GO:0000922 ... P0DP23 15719022
    62991 1xfw:T (3.4) BS03 CA ? GO:0000922 ... P0DP23 15719022
    62992 1xfx:A (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62993 1xfx:B (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62994 1xfx:C (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62995 1xfx:D (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62996 1xfx:E (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62997 1xfx:F (3.2) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    62998 1xfx:O (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    62999 1xfx:O (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63000 1xfx:O (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).