SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    630801 7fjq:A (3.6) BS01 SPM 7.6.2.- GO:0000166 ... Q9NQ11 34728622
    630802 7fjt:A (1.4) BS01 SAM 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004482 ... C4TPE0 35758665
    630803 7fju:A (1.63) BS01 W1N ? GO:0000398 ... P33334 36260741
    630804 7fju:B (1.63) BS01 W1N ? N/A P32357 36260741
    630805 7fjv:A (1.63) BS01 W1N ? GO:0000398 ... P33334 36260741
    630806 7fjv:B (1.63) BS01 W1N ? N/A P32357 36260741
    630807 7fjw:A (1.63) BS01 W1W ? GO:0000398 ... P33334 36260741
    630808 7fjx:B (1.59) BS01 W2B ? N/A P32357 36260741
    630809 7fjy:A (1.63) BS01 W2I ? GO:0000398 ... P33334 36260741
    630810 7fjz:A (1.54) BS01 W2O ? GO:0000398 ... P33334 36260741
    630811 7fk0:B (1.69) BS01 W36 ? N/A P32357 36260741
    630812 7fk1:A (1.76) BS01 W3H ? GO:0000398 ... P33334 36260741
    630813 7fk1:B (1.76) BS01 W3H ? N/A P32357 36260741
    630814 7fk2:A (1.35) BS01 VF3 ? GO:0000398 ... P33334 36260741
    630815 7fk3:A (1.59) BS01 VNC ? GO:0000398 ... P33334 36260741
    630816 7fk4:A (1.59) BS01 VNN ? GO:0000398 ... P33334 36260741
    630817 7fk4:B (1.59) BS01 VNN ? N/A P32357 36260741
    630818 7fk5:B (1.53) BS01 V3F ? N/A P32357 36260741
    630819 7fk5:B (1.53) BS02 V3F ? N/A P32357 36260741
    630820 7fk6:A (1.61) BS01 WE5 ? GO:0000398 ... P33334 36260741
    630821 7fk7:B (1.72) BS01 V4C ? N/A P32357 36260741
    630822 7fk8:B (1.67) BS01 WAO ? N/A P32357 36260741
    630823 7fk9:B (1.35) BS01 WKL ? N/A P32357 36260741
    630824 7fka:A (1.55) BS01 V6Z ? GO:0000398 ... P33334 36260741
    630825 7fka:B (1.55) BS01 V6Z ? N/A P32357 36260741
    630826 7fka:B (1.55) BS02 V6Z ? N/A P32357 36260741
    630827 7fkb:B (1.68) BS01 W3Q ? N/A P32357 36260741
    630828 7fkc:B (1.54) BS01 V7L ? N/A P32357 36260741
    630829 7fkd:B (1.45) BS01 WAE ? N/A P32357 36260741
    630830 7fke:B (1.48) BS01 WAH ? N/A P32357 36260741
    630831 7fke:B (1.48) BS02 WAH ? N/A P32357 36260741
    630832 7fkf:B (1.69) BS01 W1I ? N/A P32357 36260741
    630833 7fkg:B (1.51) BS01 WOR ? N/A P32357 36260741
    630834 7fkh:A (1.44) BS01 WAX ? GO:0000398 ... P33334 36260741
    630835 7fki:B (1.47) BS01 W25 ? N/A P32357 36260741
    630836 7fkj:A (1.74) BS01 WB6 ? GO:0000398 ... P33334 36260741
    630837 7fkk:A (1.63) BS01 WBB ? GO:0000398 ... P33334 36260741
    630838 7fkl:A (1.63) BS01 W2U ? GO:0000398 ... P33334 36260741
    630839 7fkm:B (1.53) BS01 W3B ? N/A P32357 36260741
    630840 7fkn:A (1.55) BS01 AC6 ? GO:0000398 ... P33334 36260741
    630841 7fko:A (1.51) BS01 WBF ? GO:0000398 ... P33334 36260741
    630842 7fko:B (1.51) BS01 WBF ? N/A P32357 36260741
    630843 7fkp:A (1.52) BS01 WBL ? GO:0000398 ... P33334 36260741
    630844 7fkq:B (1.68) BS01 VRY ? N/A P32357 36260741
    630845 7fkq:B (1.68) BS02 VRY ? N/A P32357 36260741
    630846 7fkq:B (1.68) BS03 VRY ? N/A P32357 36260741
    630847 7fkr:A (1.69) BS01 VQ6 ? GO:0000398 ... P33334 36260741
    630848 7fks:B (1.58) BS01 VQB ? N/A P32357 36260741
    630849 7fkt:A (1.44) BS01 VBI ? GO:0000398 ... P33334 36260741
    630850 7fkt:B (1.44) BS01 VBI ? N/A P32357 36260741
    630851 7fkt:B (1.44) BS02 VBI ? N/A P32357 36260741
    630852 7fkt:B (1.44) BS03 VBI ? N/A P32357 36260741
    630853 7fku:B (1.55) BS01 VBX ? N/A P32357 36260741
    630854 7fkv:A (1.75) BS01 VCO ? GO:0000398 ... P33334 36260741
    630855 7fkw:A (1.47) BS01 VD6 ? GO:0000398 ... P33334 36260741
    630856 7fkx:A (1.85) BS01 VDI ? GO:0000398 ... P33334 36260741
    630857 7fky:B (1.59) BS01 VKO ? N/A P32357 36260741
    630858 7fky:B (1.59) BS02 VKO ? N/A P32357 36260741
    630859 7fkz:B (1.58) BS01 VL8 ? N/A P32357 36260741
    630860 7fl0:B (1.51) BS01 VNX ? N/A P32357 36260741
    630861 7fl1:A (1.55) BS01 VO9 ? GO:0000398 ... P33334 36260741
    630862 7fl1:A (1.55) BS02 VO9 ? GO:0000398 ... P33334 36260741
    630863 7fl2:B (1.58) BS01 UYR ? N/A P32357 36260741
    630864 7fl3:A (1.51) BS01 UZ8 ? GO:0000398 ... P33334 36260741
    630865 7fl3:B (1.51) BS01 UZ8 ? N/A P32357 36260741
    630866 7fl3:B (1.51) BS02 UZ8 ? N/A P32357 36260741
    630867 7fl3:B (1.51) BS03 UZ8 ? N/A P32357 36260741
    630868 7fl4:B (1.51) BS01 UZ8 ? N/A P32357 36260741
    630869 7fl4:B (1.51) BS02 UZ8 ? N/A P32357 36260741
    630870 7fl5:B (1.89) BS01 V0C ? N/A P32357 36260741
    630871 7fl6:A (1.58) BS01 VIK ? GO:0000398 ... P33334 36260741
    630872 7fl7:B (1.72) BS01 VIX ? N/A P32357 36260741
    630873 7fl8:B (1.51) BS01 VJ9 ? N/A P32357 36260741
    630874 7fl9:A (1.59) BS01 VJO ? GO:0000398 ... P33334 36260741
    630875 7fla:A (1.87) BS01 VJY ? GO:0000398 ... P33334 36260741
    630876 7fla:B (1.87) BS01 VJY ? N/A P32357 36260741
    630877 7flb:B (1.57) BS01 VKF ? N/A P32357 36260741
    630878 7flc:B (1.95) BS01 VPW ? N/A P32357 36260741
    630879 7fld:A (1.51) BS01 VQ2 ? GO:0000398 ... P33334 36260741
    630880 7fle:A (1.57) BS01 VB9 ? GO:0000398 ... P33334 36260741
    630881 7flf:A (1.54) BS01 VBO ? GO:0000398 ... P33334 36260741
    630882 7flf:A (1.54) BS02 VBO ? GO:0000398 ... P33334 36260741
    630883 7flf:B (1.54) BS01 VBO ? N/A P32357 36260741
    630884 7flg:A (1.58) BS01 L5W ? GO:0000398 ... P33334 36260741
    630885 7flh:B (1.67) BS01 VCX ? N/A P32357 36260741
    630886 7fli:A (1.75) BS01 VDD ? GO:0000398 ... P33334 36260741
    630887 7flj:B (1.47) BS01 VE0 ? N/A P32357 36260741
    630888 7flk:A (1.62) BS01 VKX ? GO:0000398 ... P33334 36260741
    630889 7flk:A (1.62) BS02 VKX ? GO:0000398 ... P33334 36260741
    630890 7fll:A (1.48) BS01 VLI ? GO:0000398 ... P33334 36260741
    630891 7fll:B (1.48) BS01 VLI ? N/A P32357 36260741
    630892 7flm:A (1.55) BS01 VO5 ? GO:0000398 ... P33334 36260741
    630893 7flm:A (1.55) BS02 VO5 ? GO:0000398 ... P33334 36260741
    630894 7fln:B (1.57) BS01 UYL ? N/A P32357 36260741
    630895 7flo:B (1.58) BS01 UYY ? N/A P32357 36260741
    630896 7flp:A (1.58) BS01 UYY ? GO:0000398 ... P33334 36260741
    630897 7flp:B (1.58) BS01 UYY ? N/A P32357 36260741
    630898 7flq:B (1.73) BS01 V03 ? N/A P32357 36260741
    630899 7flr:A (1.63) BS01 VIE ? GO:0000398 ... P33334 36260741
    630900 7fls:B (1.51) BS01 VIP ? N/A P32357 36260741
    630901 7flt:B (1.73) BS01 VJ0 ? N/A P32357 36260741
    630902 7flt:B (1.73) BS02 VJ0 ? N/A P32357 36260741
    630903 7flu:A (1.51) BS01 VJI ? GO:0000398 ... P33334 36260741
    630904 7flv:B (1.51) BS01 VJI ? N/A P32357 36260741
    630905 7flv:B (1.51) BS02 VJI ? N/A P32357 36260741
    630906 7flw:B (1.55) BS01 V5I ? N/A P32357 36260741
    630907 7flx:A (1.75) BS01 5G1 ? GO:0000398 ... P33334 36260741
    630908 7fly:A (1.55) BS01 V5Y ? GO:0000398 ... P33334 36260741
    630909 7fly:A (1.55) BS02 V5Y ? GO:0000398 ... P33334 36260741
    630910 7flz:B (1.52) BS01 V6I ? N/A P32357 36260741
    630911 7fm0:B (1.61) BS01 VRC ? N/A P32357 36260741
    630912 7fm1:B (1.5) BS01 VRL ? N/A P32357 36260741
    630913 7fm1:B (1.5) BS02 VRL ? N/A P32357 36260741
    630914 7fm2:B (1.72) BS01 VS7 ? N/A P32357 36260741
    630915 7fm3:B (1.65) BS01 VSL ? N/A P32357 36260741
    630916 7fm4:B (1.62) BS01 VST ? N/A P32357 36260741
    630917 7fm5:B (1.56) BS01 VSX ? N/A P32357 36260741
    630918 7fm5:B (1.56) BS02 VSX ? N/A P32357 36260741
    630919 7fm5:B (1.56) BS03 VSX ? N/A P32357 36260741
    630920 7fm6:B (1.55) BS01 VTH ? N/A P32357 36260741
    630921 7fm7:A (1.51) BS01 VTL ? GO:0000398 ... P33334 36260741
    630922 7fm7:B (1.51) BS01 VTL ? N/A P32357 36260741
    630923 7fm8:B (1.55) BS01 VQF ? N/A P32357 36260741
    630924 7fm8:B (1.55) BS02 VQF ? N/A P32357 36260741
    630925 7fm8:B (1.55) BS03 VQF ? N/A P32357 36260741
    630926 7fm9:B (1.59) BS01 VQQ ? N/A P32357 36260741
    630927 7fm9:B (1.59) BS02 VQQ ? N/A P32357 36260741
    630928 7fm9:B (1.59) BS03 VQQ ? N/A P32357 36260741
    630929 7fm9:B (1.59) BS04 VQQ ? N/A P32357 36260741
    630930 7fma:B (1.41) BS01 VQZ ? N/A P32357 36260741
    630931 7fmb:A (1.55) BS01 VTT ? GO:0000398 ... P33334 36260741
    630932 7fmb:A (1.55) BS02 VTT ? GO:0000398 ... P33334 36260741
    630933 7fmb:B (1.55) BS01 VTT ? N/A P32357 36260741
    630934 7fmc:B (1.51) BS01 VU5 ? N/A P32357 36260741
    630935 7fmd:B (1.68) BS01 VUE ? N/A P32357 36260741
    630936 7fme:B (1.44) BS01 VUI ? N/A P32357 36260741
    630937 7fmf:A (1.65) BS01 VUU ? GO:0000398 ... P33334 36260741
    630938 7fmg:A (1.71) BS01 VV5 ? GO:0000398 ... P33334 36260741
    630939 7fmh:B (1.51) BS01 V5C ? N/A P32357 36260741
    630940 7fmi:A (1.34) BS01 WBQ ? GO:0000398 ... P33334 36260741
    630941 7fmi:B (1.34) BS01 WBQ ? N/A P32357 36260741
    630942 7fmj:B (1.5) BS01 V5O ? N/A P32357 36260741
    630943 7fmk:A (1.47) BS01 VRR ? GO:0000398 ... P33334 36260741
    630944 7fmk:B (1.47) BS01 VRR ? N/A P32357 36260741
    630945 7fml:A (1.58) BS01 VR6 ? GO:0000398 ... P33334 36260741
    630946 7fmm:B (1.69) BS01 VRH ? N/A P32357 36260741
    630947 7fmm:B (1.69) BS02 VRH ? N/A P32357 36260741
    630948 7fmn:B (1.6) BS01 VVF ? N/A P32357 36260741
    630949 7fmo:A (1.67) BS01 VVK ? GO:0000398 ... P33334 36260741
    630950 7fmp:B (1.72) BS01 VSQ ? N/A P32357 36260741
    630951 7fmq:A (1.58) BS01 VVR ? GO:0000398 ... P33334 36260741
    630952 7fmr:B (1.58) BS01 VTC ? N/A P32357 36260741
    630953 7fms:A (1.58) BS01 VTC ? GO:0000398 ... P33334 36260741
    630954 7fms:A (1.58) BS02 VTC ? GO:0000398 ... P33334 36260741
    630955 7fmt:B (1.67) BS01 VTO ? N/A P32357 36260741
    630956 7fmu:B (1.81) BS01 VQL ? N/A P32357 36260741
    630957 7fmv:B (1.61) BS01 VQU ? N/A P32357 36260741
    630958 7fmw:B (1.51) BS01 VTW ? N/A P32357 36260741
    630959 7fmw:B (1.51) BS02 VTW ? N/A P32357 36260741
    630960 7fmx:A (1.51) BS01 VTW ? GO:0000398 ... P33334 36260741
    630961 7fmy:A (1.65) BS01 VU9 ? GO:0000398 ... P33334 36260741
    630962 7fmz:B (1.67) BS01 WBX ? N/A P32357 36260741
    630963 7fn0:B (1.59) BS01 VUN ? N/A P32357 36260741
    630964 7fn1:A (1.44) BS01 VV0 ? GO:0000398 ... P33334 36260741
    630965 7fn1:B (1.44) BS01 VV0 ? N/A P32357 36260741
    630966 7fn1:B (1.44) BS02 VV0 ? N/A P32357 36260741
    630967 7fn1:B (1.44) BS03 VV0 ? N/A P32357 36260741
    630968 7fn2:A (1.62) BS01 VXF ? GO:0000398 ... P33334 36260741
    630969 7fn2:B (1.62) BS01 VXF ? N/A P32357 36260741
    630970 7fn4:A (1.72) BS01 VPK ? GO:0000398 ... P33334 36260741
    630971 7fn4:B (1.72) BS01 VPK ? N/A P32357 36260741
    630972 7fn5:B (1.69) BS01 VXK ? N/A P32357 36260741
    630973 7fn6:B (1.5) BS01 VY2 ? N/A P32357 36260741
    630974 7fn7:B (1.51) BS01 WC2 ? N/A P32357 36260741
    630975 7fn7:B (1.51) BS02 WC2 ? N/A P32357 36260741
    630976 7fn8:B (1.41) BS01 VYK ? N/A P32357 36260741
    630977 7fn9:B (1.55) BS01 VYU ? N/A P32357 36260741
    630978 7fna:B (1.69) BS01 VZ3 ? N/A P32357 36260741
    630979 7fnc:B (1.55) BS01 VZL ? N/A P32357 36260741
    630980 7fnd:B (1.51) BS01 VZU ? N/A P32357 36260741
    630981 7fne:A (1.57) BS01 W0C ? GO:0000398 ... P33334 36260741
    630982 7fnf:B (1.54) BS01 W0N ? N/A P32357 36260741
    630983 7fng:B (1.6) BS01 LAZ ? N/A P32357 36260741
    630984 7fng:B (1.6) BS02 LAZ ? N/A P32357 36260741
    630985 7fng:B (1.6) BS03 LAZ ? N/A P32357 36260741
    630986 7fng:B (1.6) BS04 LAZ ? N/A P32357 36260741
    630987 7fnh:B (1.57) BS01 W18 ? N/A P32357 36260741
    630988 7fni:B (1.55) BS01 VW8 ? N/A P32357 36260741
    630989 7fnj:B (1.57) BS01 VWH ? N/A P32357 36260741
    630990 7fnl:B (1.67) BS01 VWR ? N/A P32357 36260741
    630991 7fnm:B (1.72) BS01 VXB ? N/A P32357 36260741
    630992 7fnm:B (1.72) BS02 VXB ? N/A P32357 36260741
    630993 7fnm:B (1.72) BS03 VXB ? N/A P32357 36260741
    630994 7fnn:B (1.65) BS01 WC6 ? N/A P32357 36260741
    630995 7fno:A (1.65) BS01 VP3 ? GO:0000398 ... P33334 36260741
    630996 7fnp:B (1.51) BS01 VPE ? N/A P32357 36260741
    630997 7fnq:A (1.51) BS01 VPE ? GO:0000398 ... P33334 36260741
    630998 7fnr:B (1.6) BS01 VXW ? N/A P32357 36260741
    630999 7fns:A (1.45) BS01 VY6 ? GO:0000398 ... P33334 36260741
    631000 7fnt:B (1.61) BS01 VYB ? N/A P32357 36260741

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).