SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    63001 1xfx:O (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63002 1xfx:P (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63003 1xfx:P (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63004 1xfx:P (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63005 1xfx:P (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63006 1xfx:Q (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63007 1xfx:Q (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63008 1xfx:Q (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63009 1xfx:Q (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63010 1xfx:R (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63011 1xfx:R (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63012 1xfx:R (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63013 1xfx:R (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63014 1xfx:S (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63015 1xfx:S (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63016 1xfx:S (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63017 1xfx:S (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63018 1xfx:T (3.2) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63019 1xfx:T (3.2) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63020 1xfx:T (3.2) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63021 1xfx:T (3.2) BS04 CA ? GO:0000922 ... P0DP23 15719022
    63022 1xfy:A (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63023 1xfy:B (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63024 1xfy:C (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63025 1xfy:D (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63026 1xfy:E (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63027 1xfy:F (3.3) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63028 1xfy:O (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63029 1xfy:O (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63030 1xfy:P (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63031 1xfy:P (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63032 1xfy:Q (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63033 1xfy:Q (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63034 1xfy:R (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63035 1xfy:R (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63036 1xfy:S (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63037 1xfy:S (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63038 1xfy:T (3.3) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63039 1xfy:T (3.3) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63040 1xfz:A (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63041 1xfz:B (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63042 1xfz:C (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63043 1xfz:D (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63044 1xfz:E (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63045 1xfz:F (3.25) BS01 MG 4.6.1.1 GO:0003824 ... P40136 15719022
    63046 1xfz:O (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63047 1xfz:O (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63048 1xfz:O (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63049 1xfz:P (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63050 1xfz:P (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63051 1xfz:P (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63052 1xfz:Q (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63053 1xfz:Q (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63054 1xfz:Q (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63055 1xfz:R (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63056 1xfz:R (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63057 1xfz:R (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63058 1xfz:S (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63059 1xfz:S (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63060 1xfz:S (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63061 1xfz:T (3.25) BS01 CA ? GO:0000922 ... P0DP23 15719022
    63062 1xfz:T (3.25) BS02 CA ? GO:0000922 ... P0DP23 15719022
    63063 1xfz:T (3.25) BS03 CA ? GO:0000922 ... P0DP23 15719022
    63064 1xg0:A (0.97) BS01 DBV ? GO:0030089 ... Q00433 15504407
    63065 1xg0:A (0.97) BS02 DBV ? GO:0030089 ... Q00433 15504407
    63066 1xg0:A (0.97) BS03 PEB ? GO:0030089 ... Q00433 15504407
    63067 1xg0:A (0.97) BS04 PEB ? GO:0030089 ... Q00433 15504407
    63068 1xg0:A (0.97) BS05 PEB ? GO:0030089 ... Q00433 15504407
    63069 1xg0:B (0.97) BS01 DBV ? GO:0030089 ... P30943 15504407
    63070 1xg0:B (0.97) BS02 DBV ? GO:0030089 ... P30943 15504407
    63071 1xg0:B (0.97) BS03 PEB ? GO:0030089 ... P30943 15504407
    63072 1xg0:B (0.97) BS04 PEB ? GO:0030089 ... P30943 15504407
    63073 1xg0:C (0.97) BS01 PEB ? GO:0009535 ... P27198 15504407
    63074 1xg0:C (0.97) BS02 PEB ? GO:0009535 ... P27198 15504407
    63075 1xg0:C (0.97) BS03 PEB ? GO:0009535 ... P27198 15504407
    63076 1xg0:C (0.97) BS04 PEB ? GO:0009535 ... P27198 15504407
    63077 1xg0:D (0.97) BS01 DBV ? GO:0009535 ... P27198 15504407
    63078 1xg0:D (0.97) BS02 PEB ? GO:0009535 ... P27198 15504407
    63079 1xg0:D (0.97) BS03 PEB ? GO:0009535 ... P27198 15504407
    63080 1xg0:D (0.97) BS04 PEB ? GO:0009535 ... P27198 15504407
    63081 1xg3:A (1.9) BS01 PYR 4.1.3.30 GO:0000287 ... P77541 15723538
    63082 1xg3:B (1.9) BS01 PYR 4.1.3.30 GO:0000287 ... P77541 15723538
    63083 1xg3:C (1.9) BS01 PYR 4.1.3.30 GO:0000287 ... P77541 15723538
    63084 1xg3:D (1.9) BS01 PYR 4.1.3.30 GO:0000287 ... P77541 15723538
    63085 1xg5:A (1.53) BS01 NAP 1.1.1.270
    1.1.1.62
    N/A Q6UWP2 N/A
    63086 1xg5:B (1.53) BS01 NAP 1.1.1.270
    1.1.1.62
    N/A Q6UWP2 N/A
    63087 1xg5:C (1.53) BS01 NAP 1.1.1.270
    1.1.1.62
    N/A Q6UWP2 N/A
    63088 1xg5:D (1.53) BS01 NAP 1.1.1.270
    1.1.1.62
    N/A Q6UWP2 N/A
    63089 1xge:A (1.9) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 15826651
    63090 1xge:A (1.9) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 15826651
    63091 1xge:A (1.9) BS03 DOR 3.5.2.3 GO:0004151 ... P05020 15826651 MOAD: Kd=20.8uM
    63092 1xge:B (1.9) BS01 ZN 3.5.2.3 GO:0004151 ... P05020 15826651
    63093 1xge:B (1.9) BS02 ZN 3.5.2.3 GO:0004151 ... P05020 15826651
    63094 1xge:B (1.9) BS03 NCD 3.5.2.3 GO:0004151 ... P05020 15826651
    63095 1xgi:B (1.96) BS01 NST 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=14uM
    63096 1xgj:A (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    BindingDB: Ki=1000nM
    63097 1xgj:B (1.97) BS01 HTC 3.5.2.6 GO:0008800 ... P00811 15796528 MOAD: Ki=1uM
    BindingDB: Ki=1000nM
    63098 1xgl:B (-1.00) BS01 peptide ? GO:0005179 ... P01308 7749917
    63099 1xgm:A (2.8) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63100 1xgm:A (2.8) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63101 1xgm:B (2.8) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63102 1xgm:B (2.8) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63103 1xgn:A (2.9) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63104 1xgn:A (2.9) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63105 1xgn:B (2.9) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63106 1xgn:B (2.9) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63107 1xgs:A (1.75) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63108 1xgs:A (1.75) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63109 1xgs:B (1.75) BS01 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63110 1xgs:B (1.75) BS02 CO 3.4.11.18 GO:0004177 ... P56218 9811545
    63111 1xgy:H (2.71) BS01 peptide ? N/A Q6PF95 16407202
    63112 1xgy:H (2.71) BS02 peptide ? N/A Q6PF95 16407202
    63113 1xgy:I (2.71) BS01 peptide ? N/A Q6PF95 16407202
    63114 1xgy:L (2.71) BS01 peptide N/A N/A N/A 16407202
    63115 1xgy:M (2.71) BS01 peptide N/A N/A N/A 16407202
    63116 1xgz:A (2.0) BS01 CA 3.2.1.1 GO:0003824 ... P04746 15722449
    63117 1xh0:A (2.0) BS01 AAO 3.2.1.1 GO:0003824 ... P04746 15722449 BindingDB: Ki=1250nM
    63118 1xh1:A (2.03) BS01 CA 3.2.1.1 GO:0003824 ... P04746 15722449
    63119 1xh1:A (2.03) BS02 CL 3.2.1.1 GO:0003824 ... P04746 15722449
    63120 1xh2:A (2.2) BS01 ARE 3.2.1.1 GO:0003824 ... P04746 15722449
    63121 1xh2:A (2.2) BS02 CA 3.2.1.1 GO:0003824 ... P04746 15722449
    63122 1xh2:A (2.2) BS03 CL 3.2.1.1 GO:0003824 ... P04746 15722449
    63123 1xh3:A (1.48) BS01 peptide ? N/A P01889 15494511
    63124 1xh4:A (2.45) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63125 1xh4:A (2.45) BS02 R69 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: Kd=34nM
    BindingDB: IC50=30nM
    63126 1xh5:A (2.05) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63127 1xh5:A (2.05) BS02 R68 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: Kd=3400nM
    63128 1xh5:A (2.05) BS03 BU3 2.7.11.11 GO:0000287 ... P00517 15634010
    63129 1xh5:A (2.05) BS04 BU3 2.7.11.11 GO:0000287 ... P00517 15634010
    63130 1xh6:A (1.9) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63131 1xh6:A (1.9) BS02 R94 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: Kd=48nM
    BindingDB: IC50=400nM
    63132 1xh7:A (2.47) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63133 1xh7:A (2.47) BS02 R96 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: Kd=150nM
    BindingDB: IC50=1900nM
    63134 1xh8:A (1.6) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63135 1xh8:A (1.6) BS02 R55 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: ic50=1700nM
    BindingDB: IC50=1700nM
    63136 1xh9:A (1.64) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63137 1xh9:A (1.64) BS02 R69 2.7.11.11 GO:0000287 ... P00517 15634010 MOAD: Kd=17nM
    BindingDB: IC50=30nM
    63138 1xh9:A (1.64) BS03 BU3 2.7.11.11 GO:0000287 ... P00517 15634010
    63139 1xh9:A (1.64) BS04 BU3 2.7.11.11 GO:0000287 ... P00517 15634010
    63140 1xh9:A (1.64) BS05 BU3 2.7.11.11 GO:0000287 ... P00517 15634010
    63141 1xha:A (2.46) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 15634010
    63142 1xha:A (2.46) BS02 R68 2.7.11.11 GO:0000287 ... P00517 15634010
    63143 1xhb:A (2.5) BS01 MN 2.4.1.41 N/A O08912 15486088
    63144 1xhb:A (2.5) BS02 CA 2.4.1.41 N/A O08912 15486088
    63145 1xhc:A (2.35) BS01 FAD 1.18.1.4 GO:0005737 ... Q8U1K9 N/A
    63146 1xhf:A (2.152) BS01 MG ? GO:0000160 ... P0A9Q1 15876365
    63147 1xhf:A (2.152) BS02 BEF ? GO:0000160 ... P0A9Q1 15876365
    63148 1xhf:B (2.152) BS01 MG ? GO:0000160 ... P0A9Q1 15876365
    63149 1xhf:B (2.152) BS02 BEF ? GO:0000160 ... P0A9Q1 15876365
    63150 1xhf:B (2.152) BS03 BF2 ? GO:0000160 ... P0A9Q1 15876365
    63151 1xhl:A (2.4) BS01 NDP 1.1.1.236 N/A Q19774 N/A
    63152 1xhl:B (2.4) BS01 NDP 1.1.1.236 N/A Q19774 N/A
    63153 1xhl:B (2.4) BS02 TNE 1.1.1.236 N/A Q19774 N/A
    63154 1xhm:A (2.7) BS01 peptide ? GO:0001750 ... P62871 16060668
    63155 1xhu:A (2.95) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63156 1xhu:A (2.95) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63157 1xhu:A (2.95) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63158 1xhu:A (2.95) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63159 1xhu:B (2.95) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63160 1xhu:B (2.95) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63161 1xhu:B (2.95) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63162 1xhu:B (2.95) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63163 1xhu:C (2.95) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63164 1xhu:C (2.95) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63165 1xhu:C (2.95) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63166 1xhu:C (2.95) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63167 1xhu:D (2.95) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63168 1xhu:D (2.95) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63169 1xhu:D (2.95) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63170 1xhu:D (2.95) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63171 1xhv:A (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63172 1xhv:A (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63173 1xhv:A (2.5) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63174 1xhv:A (2.5) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63175 1xhv:A (2.5) BS05 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63176 1xhv:A (2.5) BS06 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63177 1xhv:B (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63178 1xhv:B (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63179 1xhv:B (2.5) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63180 1xhv:B (2.5) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63181 1xhv:B (2.5) BS05 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63182 1xhv:B (2.5) BS06 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63183 1xhv:C (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63184 1xhv:C (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63185 1xhv:C (2.5) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63186 1xhv:C (2.5) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63187 1xhv:C (2.5) BS05 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63188 1xhv:C (2.5) BS06 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63189 1xhv:C (2.5) BS07 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63190 1xhv:D (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63191 1xhv:D (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63192 1xhv:D (2.5) BS03 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63193 1xhv:D (2.5) BS04 dna 3.1.21.4 GO:0003677 ... P17743 15476804
    63194 1xhv:D (2.5) BS05 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63195 1xhv:D (2.5) BS06 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63196 1xhv:D (2.5) BS07 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63197 1xhv:D (2.5) BS08 MN 3.1.21.4 GO:0003677 ... P17743 15476804
    63198 1xhy:A (1.85) BS01 KAI ? GO:0015276 ... P19491 15591246 MOAD: Ki=624nM
    BindingDB: EC50=380000nM, Ki=3690nM
    63199 1xhz:A (2.7) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15546620
    63200 1xhz:B (2.7) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15546620

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).