SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    63201 1xhz:C (2.7) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15546620
    63202 1xhz:D (2.7) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15546620
    63203 1xi1:A (2.2) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15608377
    63204 1xi1:A (2.2) BS02 MG 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15608377
    63205 1xi1:B (2.2) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15608377
    63206 1xi1:B (2.2) BS02 MG 2.7.7.7
    3.1.11.-
    GO:0000166 ... P03680 15608377
    63207 1xi2:A (1.5) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 16129418
    63208 1xi2:A (1.5) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 16129418
    63209 1xi2:A (1.5) BS03 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    63210 1xi2:A (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    63211 1xi2:B (1.5) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 16129418
    63212 1xi2:B (1.5) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 16129418
    63213 1xi2:B (1.5) BS03 FAD 1.10.5.1 GO:0001512 ... P16083 16129418
    63214 1xi2:B (1.5) BS04 CB1 1.10.5.1 GO:0001512 ... P16083 16129418 MOAD: ic50<1uM
    63215 1xi9:A (2.33) BS01 PLP ? GO:0009058 ... Q9P9M8 N/A
    63216 1xi9:B (2.33) BS01 PLP ? GO:0009058 ... Q9P9M8 N/A
    63217 1xi9:C (2.33) BS01 PLP ? GO:0009058 ... Q9P9M8 N/A
    63218 1xi9:D (2.33) BS01 PLP ? GO:0009058 ... Q9P9M8 N/A
    63219 1xib:A (1.6) BS01 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63220 1xib:A (1.6) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63221 1xic:A (1.6) BS01 XLS 5.3.1.5 GO:0000287 ... P24300 15299449
    63222 1xic:A (1.6) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63223 1xic:A (1.6) BS03 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63224 1xid:A (1.7) BS01 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63225 1xid:A (1.7) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63226 1xid:A (1.7) BS03 ASC 5.3.1.5 GO:0000287 ... P24300 15299449
    63227 1xie:A (1.7) BS01 ASO 5.3.1.5 GO:0000287 ... P24300 15299449
    63228 1xie:A (1.7) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63229 1xie:A (1.7) BS03 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63230 1xif:A (1.6) BS01 GLC 5.3.1.5 GO:0000287 ... P24300 15299449
    63231 1xif:A (1.6) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63232 1xif:A (1.6) BS03 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63233 1xig:A (1.7) BS01 XYL 5.3.1.5 GO:0000287 ... P24300 15299449
    63234 1xig:A (1.7) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63235 1xig:A (1.7) BS03 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63236 1xih:A (1.7) BS01 SOR 5.3.1.5 GO:0000287 ... P24300 15299449
    63237 1xih:A (1.7) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63238 1xii:A (1.7) BS01 XUL 5.3.1.5 GO:0000287 ... P24300 15299449
    63239 1xii:A (1.7) BS02 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63240 1xii:A (1.7) BS03 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63241 1xij:A (1.7) BS01 MN 5.3.1.5 GO:0000287 ... P24300 15299449
    63242 1xik:A (1.7) BS01 FE2 1.17.4.1 GO:0004748 ... P69924 8805591
    63243 1xik:A (1.7) BS02 FE2 1.17.4.1 GO:0004748 ... P69924 8805591
    63244 1xik:B (1.7) BS01 FE2 1.17.4.1 GO:0004748 ... P69924 8805591
    63245 1xik:B (1.7) BS02 FE2 1.17.4.1 GO:0004748 ... P69924 8805591
    63246 1xil:A (1.53) BS01 MN 1.15.1.1 GO:0004784 ... P04179 16150974
    63247 1xil:B (1.53) BS01 MN 1.15.1.1 GO:0004784 ... P04179 16150974
    63248 1xim:A (2.2) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1540579
    63249 1xim:A (2.2) BS02 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63250 1xim:A (2.2) BS03 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63251 1xim:B (2.2) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1540579
    63252 1xim:B (2.2) BS02 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63253 1xim:B (2.2) BS03 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63254 1xim:C (2.2) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1540579
    63255 1xim:C (2.2) BS02 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63256 1xim:C (2.2) BS03 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63257 1xim:D (2.2) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1540579
    63258 1xim:D (2.2) BS02 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63259 1xim:D (2.2) BS03 CO 5.3.1.5 GO:0000287 ... P12851 1540579
    63260 1xin:A (2.4) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1610791
    63261 1xin:A (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    63262 1xin:B (2.4) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1610791
    63263 1xin:B (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    63264 1xin:C (2.4) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1610791
    63265 1xin:C (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    63266 1xin:D (2.4) BS01 XYL 5.3.1.5 GO:0000287 ... P12851 1610791
    63267 1xin:D (2.4) BS02 MG 5.3.1.5 GO:0000287 ... P12851 1610791
    63268 1xio:A (2.0) BS01 RET ? GO:0005216 ... A0ACD6B968 15459346
    63269 1xis:A (1.6) BS01 MN 5.3.1.5 GO:0000287 ... P24300 2006134
    63270 1xis:A (1.6) BS02 MN 5.3.1.5 GO:0000287 ... P24300 2006134
    63271 1xiu:A (2.5) BS01 peptide ? GO:0003677 ... Q8T5C6 16274693
    63272 1xiu:A (2.5) BS02 9CR ? GO:0003677 ... Q8T5C6 16274693
    63273 1xiu:B (2.5) BS01 peptide ? GO:0003677 ... Q8T5C6 16274693
    63274 1xiu:B (2.5) BS02 9CR ? GO:0003677 ... Q8T5C6 16274693
    63275 1xiv:A (1.7) BS01 RB2 1.1.1.27 GO:0003824 ... Q27743 15978953
    63276 1xj0:A (1.7) BS01 GDP 3.6.5.2 GO:0003924 ... P01112 N/A
    63277 1xj2:A (2.0) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63278 1xj2:A (2.0) BS02 CMO 2.7.13.3 GO:0006355 ... P23222 15779889
    63279 1xj3:A (1.9) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63280 1xj4:A (1.8) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63281 1xj4:A (1.8) BS02 CMO 2.7.13.3 GO:0006355 ... P23222 15779889
    63282 1xj4:B (1.8) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63283 1xj6:A (1.9) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63284 1xj6:B (1.9) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 15779889
    63285 1xj7:A (2.7) BS01 peptide ? N/A P10275 15563469
    63286 1xj7:A (2.7) BS02 DHT ? N/A P10275 15563469 BindingDB: IC50=>10000nM, EC50=6nM, Ki=0.2nM
    63287 1xjb:A (1.9) BS01 ACT 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20
    GO:0004032 ... P52895 15929998
    63288 1xjb:A (1.9) BS02 ACT 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20
    GO:0004032 ... P52895 15929998
    63289 1xjb:A (1.9) BS03 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20
    GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    63290 1xjb:B (1.9) BS01 ACT 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20
    GO:0004032 ... P52895 15929998
    63291 1xjb:B (1.9) BS02 NAP 1.-.-.-
    1.1.1.112
    1.1.1.209
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.3.1.20
    GO:0004032 ... P52895 15929998 MOAD: Kd=0.88uM
    63292 1xjd:A (2.0) BS01 STU 2.7.11.13 GO:0004672 ... Q04759 15364937 MOAD: Ki=0.33nM
    63293 1xje:A (1.9) BS01 GDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63294 1xje:A (1.9) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63295 1xje:A (1.9) BS03 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63296 1xje:B (1.9) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63297 1xje:B (1.9) BS02 GDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63298 1xje:B (1.9) BS03 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63299 1xjf:A (2.4) BS01 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63300 1xjf:A (2.4) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63301 1xjf:B (2.4) BS01 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63302 1xjf:B (2.4) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63303 1xjg:A (2.5) BS01 UDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63304 1xjg:A (2.5) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63305 1xjg:A (2.5) BS03 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63306 1xjg:B (2.5) BS01 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63307 1xjg:B (2.5) BS02 UDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63308 1xjg:B (2.5) BS03 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63309 1xji:A (2.2) BS01 RET ? GO:0005216 ... P02945 15689517
    63310 1xji:A (2.2) BS02 CPS ? GO:0005216 ... P02945 15689517
    63311 1xjj:A (1.86) BS01 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63312 1xjj:A (1.86) BS02 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63313 1xjj:A (1.86) BS03 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63314 1xjj:B (1.86) BS01 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63315 1xjj:B (1.86) BS02 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63316 1xjj:B (1.86) BS03 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63317 1xjk:A (2.12) BS01 ADP 1.17.4.1 GO:0000166 ... O33839 15475969
    63318 1xjk:A (2.12) BS02 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63319 1xjk:A (2.12) BS03 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63320 1xjk:B (2.12) BS01 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63321 1xjk:B (2.12) BS02 ADP 1.17.4.1 GO:0000166 ... O33839 15475969
    63322 1xjk:B (2.12) BS03 DGT 1.17.4.1 GO:0000166 ... O33839 15475969
    63323 1xjl:A (2.59) BS01 CA ? GO:0001525 ... P07355 N/A
    63324 1xjl:A (2.59) BS02 CA ? GO:0001525 ... P07355 N/A
    63325 1xjl:A (2.59) BS03 CA ? GO:0001525 ... P07355 N/A
    63326 1xjl:A (2.59) BS04 CA ? GO:0001525 ... P07355 N/A
    63327 1xjl:A (2.59) BS05 CA ? GO:0001525 ... P07355 N/A
    63328 1xjl:A (2.59) BS06 CA ? GO:0001525 ... P07355 N/A
    63329 1xjl:A (2.59) BS07 CA ? GO:0001525 ... P07355 N/A
    63330 1xjl:B (2.59) BS01 CA ? GO:0001525 ... P07355 N/A
    63331 1xjl:B (2.59) BS02 CA ? GO:0001525 ... P07355 N/A
    63332 1xjl:B (2.59) BS03 CA ? GO:0001525 ... P07355 N/A
    63333 1xjl:B (2.59) BS04 CA ? GO:0001525 ... P07355 N/A
    63334 1xjl:B (2.59) BS05 CA ? GO:0001525 ... P07355 N/A
    63335 1xjl:B (2.59) BS06 CA ? GO:0001525 ... P07355 N/A
    63336 1xjl:B (2.59) BS07 CA ? GO:0001525 ... P07355 N/A
    63337 1xjm:A (2.4) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63338 1xjm:A (2.4) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63339 1xjm:A (2.4) BS03 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63340 1xjm:B (2.4) BS01 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63341 1xjm:B (2.4) BS02 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63342 1xjm:B (2.4) BS03 TTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63343 1xjn:A (2.25) BS01 CDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63344 1xjn:A (2.25) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63345 1xjn:A (2.25) BS03 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63346 1xjn:B (2.25) BS01 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63347 1xjn:B (2.25) BS02 CDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63348 1xjn:B (2.25) BS03 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63349 1xjn:C (2.25) BS01 CDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63350 1xjn:C (2.25) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63351 1xjn:C (2.25) BS03 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63352 1xjn:D (2.25) BS01 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63353 1xjn:D (2.25) BS02 DTP 1.17.4.1 GO:0000166 ... O33839 15475969
    63354 1xjn:D (2.25) BS03 CDP 1.17.4.1 GO:0000166 ... O33839 15475969
    63355 1xjo:A (1.75) BS01 ZN 3.4.11.24 GO:0004177 ... P80561 9048953
    63356 1xjo:A (1.75) BS02 ZN 3.4.11.24 GO:0004177 ... P80561 9048953
    63357 1xjo:A (1.75) BS03 PO4 3.4.11.24 GO:0004177 ... P80561 9048953
    63358 1xjo:A (1.75) BS04 CA 3.4.11.24 GO:0004177 ... P80561 9048953
    63359 1xjq:A (2.06) BS01 ADP 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63360 1xjq:B (2.06) BS01 ADP 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63361 1xjq:B (2.06) BS02 ADP 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63362 1xjs:A (-1.00) BS01 ZN 2.-.-.- GO:0005506 ... O32163 N/A
    63363 1xjv:A (1.73) BS01 dna ? GO:0000723 ... Q9NUX5 15558049
    63364 1xjw:A (2.71) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15890205
    63365 1xjw:B (2.71) BS01 ZN ? GO:0005515 ... P0A7F3 15890205
    63366 1xjw:C (2.71) BS01 PAL 2.1.3.2 GO:0004070 ... P0A786 15890205
    63367 1xjw:D (2.71) BS01 ZN ? GO:0005515 ... P0A7F3 15890205
    63368 1xjz:A (1.88) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63369 1xjz:B (1.88) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63370 1xk0:A (2.18) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63371 1xk0:B (2.18) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63372 1xk1:A (2.08) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63373 1xk1:B (2.08) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15690204
    63374 1xk2:A (2.2) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15525643
    63375 1xk2:B (2.2) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15525643
    63376 1xk3:A (2.08) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15525643
    63377 1xk3:B (2.08) BS01 HEM 1.14.14.18 GO:0004392 ... P09601 15525643
    63378 1xk4:A (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63379 1xk4:A (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63380 1xk4:B (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63381 1xk4:B (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63382 1xk4:C (1.8) BS01 CA ? GO:0002523 ... P06702 17553524
    63383 1xk4:C (1.8) BS02 CA ? GO:0002523 ... P06702 17553524
    63384 1xk4:D (1.8) BS01 CA ? GO:0002523 ... P06702 17553524
    63385 1xk4:D (1.8) BS02 CA ? GO:0002523 ... P06702 17553524
    63386 1xk4:E (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63387 1xk4:E (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63388 1xk4:F (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63389 1xk4:F (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63390 1xk4:G (1.8) BS01 CA ? GO:0002523 ... P06702 17553524
    63391 1xk4:G (1.8) BS02 CA ? GO:0002523 ... P06702 17553524
    63392 1xk4:H (1.8) BS01 CA ? GO:0002523 ... P06702 17553524
    63393 1xk4:H (1.8) BS02 CA ? GO:0002523 ... P06702 17553524
    63394 1xk4:I (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63395 1xk4:I (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63396 1xk4:J (1.8) BS01 CA ? GO:0002523 ... P05109 17553524
    63397 1xk4:J (1.8) BS02 CA ? GO:0002523 ... P05109 17553524
    63398 1xk4:K (1.8) BS01 CA ? GO:0002523 ... P06702 17553524
    63399 1xk4:K (1.8) BS02 CA ? GO:0002523 ... P06702 17553524
    63400 1xk4:L (1.8) BS01 CA ? GO:0002523 ... P06702 17553524

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).