SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    63601 1xmi:A (2.25) BS02 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63602 1xmi:B (2.25) BS01 MG 5.6.1.6 GO:0005524 ... P13569 15528182
    63603 1xmi:B (2.25) BS02 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63604 1xmi:C (2.25) BS01 MG 5.6.1.6 GO:0005524 ... P13569 15528182
    63605 1xmi:C (2.25) BS02 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63606 1xmi:D (2.25) BS01 MG 5.6.1.6 GO:0005524 ... P13569 15528182
    63607 1xmi:D (2.25) BS02 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63608 1xmi:E (2.25) BS01 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63609 1xmi:E (2.25) BS02 MG 5.6.1.6 GO:0005524 ... P13569 15528182
    63610 1xmi:E (2.25) BS03 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63611 1xmj:A (2.3) BS01 ATP 5.6.1.6 GO:0005524 ... P13569 15528182
    63612 1xmm:A (2.5) BS01 M7G 3.6.1.59 GO:0000288 ... Q96C86 15769464
    63613 1xmm:B (2.5) BS01 G7M 3.6.1.59 GO:0000288 ... Q96C86 15769464
    63614 1xmm:B (2.5) BS02 M7G 3.6.1.59 GO:0000288 ... Q96C86 15769464
    63615 1xmm:C (2.5) BS01 G7M 3.6.1.59 GO:0000288 ... Q96C86 15769464
    63616 1xmm:D (2.5) BS01 M7G 3.6.1.59 GO:0000288 ... Q96C86 15769464
    63617 1xmn:B (1.85) BS01 0G6 3.4.21.5 GO:0004252 ... P00734 15548541
    63618 1xmn:D (1.85) BS01 SGN 3.4.21.5 GO:0004252 ... P00734 15548541
    63619 1xmn:D (1.85) BS02 0G6 3.4.21.5 GO:0004252 ... P00734 15548541
    63620 1xmn:F (1.85) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 15548541
    63621 1xmn:F (1.85) BS02 SGN 3.4.21.5 GO:0004252 ... P00734 15548541
    63622 1xmn:F (1.85) BS03 0G6 3.4.21.5 GO:0004252 ... P00734 15548541
    63623 1xmn:H (1.85) BS01 SGN 3.4.21.5 GO:0004252 ... P00734 15548541
    63624 1xmn:H (1.85) BS02 0G6 3.4.21.5 GO:0004252 ... P00734 15548541
    63625 1xmo:B (3.25) BS01 rna ? GO:0003735 ... P80371 15558052
    63626 1xmo:C (3.25) BS01 rna ? GO:0003676 ... P80372 15558052
    63627 1xmo:D (3.25) BS01 rna ? GO:0003723 ... P80373 15558052
    63628 1xmo:E (3.25) BS01 rna ? GO:0003723 ... Q5SHQ5 15558052
    63629 1xmo:F (3.25) BS01 rna ? GO:0003735 ... Q5SLP8 15558052
    63630 1xmo:G (3.25) BS01 rna ? GO:0000049 ... P17291 15558052
    63631 1xmo:H (3.25) BS01 rna ? GO:0003735 ... P0DOY9 15558052
    63632 1xmo:I (3.25) BS01 rna ? GO:0003723 ... P80374 15558052
    63633 1xmo:J (3.25) BS01 rna ? GO:0000049 ... Q5SHN7 15558052
    63634 1xmo:J (3.25) BS02 MG ? GO:0000049 ... Q5SHN7 15558052
    63635 1xmo:K (3.25) BS01 rna ? GO:0003735 ... P80376 15558052
    63636 1xmo:L (3.25) BS01 rna ? GO:0000049 ... Q5SHN3 15558052
    63637 1xmo:L (3.25) BS02 MG ? GO:0000049 ... Q5SHN3 15558052
    63638 1xmo:M (3.25) BS01 rna ? GO:0000049 ... P80377 15558052
    63639 1xmo:N (3.25) BS01 rna ? GO:0003735 ... P0DOY6 15558052
    63640 1xmo:N (3.25) BS02 ZN ? GO:0003735 ... P0DOY6 15558052
    63641 1xmo:O (3.25) BS01 rna ? GO:0003735 ... Q5SJ76 15558052
    63642 1xmo:P (3.25) BS01 rna ? GO:0003735 ... Q5SJH3 15558052
    63643 1xmo:Q (3.25) BS01 rna ? GO:0003735 ... P0DOY7 15558052
    63644 1xmo:R (3.25) BS01 rna ? GO:0003735 ... Q5SLQ0 15558052
    63645 1xmo:S (3.25) BS01 rna ? GO:0000028 ... Q5SHP2 15558052
    63646 1xmo:T (3.25) BS01 rna ? GO:0003723 ... P80380 15558052
    63647 1xmq:B (3.0) BS01 rna ? GO:0003735 ... P80371 15558052
    63648 1xmq:C (3.0) BS01 rna ? GO:0003676 ... P80372 15558052
    63649 1xmq:D (3.0) BS01 rna ? GO:0003723 ... P80373 15558052
    63650 1xmq:D (3.0) BS02 ZN ? GO:0003723 ... P80373 15558052
    63651 1xmq:E (3.0) BS01 rna ? GO:0003723 ... Q5SHQ5 15558052
    63652 1xmq:F (3.0) BS01 rna ? GO:0003735 ... Q5SLP8 15558052
    63653 1xmq:G (3.0) BS01 rna ? GO:0000049 ... P17291 15558052
    63654 1xmq:H (3.0) BS01 rna ? GO:0003735 ... P0DOY9 15558052
    63655 1xmq:I (3.0) BS01 rna ? GO:0003723 ... P80374 15558052
    63656 1xmq:J (3.0) BS01 rna ? GO:0000049 ... Q5SHN7 15558052
    63657 1xmq:K (3.0) BS01 rna ? GO:0003735 ... P80376 15558052
    63658 1xmq:L (3.0) BS01 rna ? GO:0000049 ... Q5SHN3 15558052
    63659 1xmq:L (3.0) BS02 MG ? GO:0000049 ... Q5SHN3 15558052
    63660 1xmq:M (3.0) BS01 rna ? GO:0000049 ... P80377 15558052
    63661 1xmq:N (3.0) BS01 rna ? GO:0003735 ... P0DOY6 15558052
    63662 1xmq:N (3.0) BS02 ZN ? GO:0003735 ... P0DOY6 15558052
    63663 1xmq:O (3.0) BS01 rna ? GO:0003735 ... Q5SJ76 15558052
    63664 1xmq:P (3.0) BS01 rna ? GO:0003735 ... Q5SJH3 15558052
    63665 1xmq:Q (3.0) BS01 rna ? GO:0003735 ... P0DOY7 15558052
    63666 1xmq:R (3.0) BS01 rna ? GO:0003735 ... Q5SLQ0 15558052
    63667 1xmq:S (3.0) BS01 rna ? GO:0000028 ... Q5SHP2 15558052
    63668 1xmq:T (3.0) BS01 rna ? GO:0003723 ... P80380 15558052
    63669 1xms:A (2.1) BS01 ANP ? GO:0000150 ... P0A7G6 15610008
    63670 1xmt:A (1.15) BS01 BR 2.3.1.- N/A Q9CAQ2 17128971
    63671 1xmt:A (1.15) BS02 BR 2.3.1.- N/A Q9CAQ2 17128971
    63672 1xmt:A (1.15) BS03 BR 2.3.1.- N/A Q9CAQ2 17128971
    63673 1xmt:A (1.15) BS04 BR 2.3.1.- N/A Q9CAQ2 17128971
    63674 1xmt:A (1.15) BS05 BR 2.3.1.- N/A Q9CAQ2 17128971
    63675 1xmt:A (1.15) BS06 BR 2.3.1.- N/A Q9CAQ2 17128971
    63676 1xmu:A (2.3) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63677 1xmu:A (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    63678 1xmu:B (2.3) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63679 1xmu:B (2.3) BS02 ROF 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.84nM
    BindingDB: IC50=0.398nM, Ki=0.398107nM
    63680 1xmv:A (1.9) BS01 MG ? GO:0000150 ... P0A7G6 15610008
    63681 1xmv:A (1.9) BS02 ADP ? GO:0000150 ... P0A7G6 15610008
    63682 1xmy:A (2.4) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63683 1xmy:A (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63684 1xmy:B (2.4) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63685 1xmy:B (2.4) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63686 1xmz:A (1.38) BS01 NH2 ? GO:0008218 ... Q9GZ28 15823036
    63687 1xmz:B (1.38) BS01 NH2 ? GO:0008218 ... Q9GZ28 15823036
    63688 1xn0:A (2.31) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63689 1xn0:A (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63690 1xn0:A (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63691 1xn0:B (2.31) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 15576036
    63692 1xn0:B (2.31) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63693 1xn0:B (2.31) BS03 ROL 3.1.4.53 GO:0004114 ... Q07343 15576036 MOAD: ic50=0.57uM
    63694 1xn2:A (1.9) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 15628850
    63695 1xn2:B (1.9) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 15628850
    63696 1xn2:C (1.9) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 15628850
    63697 1xn2:D (1.9) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 15628850
    63698 1xn3:C (2.0) BS01 peptide 3.4.23.46 GO:0004190 ... P56817 15628850
    63699 1xng:A (1.7) BS01 DND 6.3.1.5 GO:0003952 ... O25096 15645437
    63700 1xng:A (1.7) BS02 ATP 6.3.1.5 GO:0003952 ... O25096 15645437
    63701 1xng:A (1.7) BS03 DND 6.3.1.5 GO:0003952 ... O25096 15645437
    63702 1xng:B (1.7) BS01 DND 6.3.1.5 GO:0003952 ... O25096 15645437
    63703 1xng:B (1.7) BS02 DND 6.3.1.5 GO:0003952 ... O25096 15645437
    63704 1xng:B (1.7) BS03 ATP 6.3.1.5 GO:0003952 ... O25096 15645437
    63705 1xnj:A (1.98) BS01 ADX 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63706 1xnj:B (1.98) BS01 ADP 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63707 1xnj:B (1.98) BS02 ADX 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63708 1xnj:B (1.98) BS03 ADX 2.7.1.25
    2.7.7.4
    GO:0000103 ... O43252 15755455
    63709 1xnk:A (1.55) BS01 Z4U 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63710 1xnk:A (1.55) BS02 TWY 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63711 1xnk:A (1.55) BS03 TWY 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63712 1xnk:B (1.55) BS01 Z4U 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63713 1xnk:B (1.55) BS02 TWY 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63714 1xnk:B (1.55) BS03 TWY 3.2.1.8 GO:0004553 ... Q8J1V6 15853815
    63715 1xnn:A (2.2) BS01 HYQ ? N/A P15207 15603938 MOAD: Ki=0.5nM
    63716 1xnq:B (3.05) BS01 rna ? GO:0003735 ... P80371 15558050
    63717 1xnq:C (3.05) BS01 rna ? GO:0003676 ... P80372 15558050
    63718 1xnq:D (3.05) BS01 rna ? GO:0003723 ... P80373 15558050
    63719 1xnq:E (3.05) BS01 rna ? GO:0003723 ... Q5SHQ5 15558050
    63720 1xnq:F (3.05) BS01 rna ? GO:0003735 ... Q5SLP8 15558050
    63721 1xnq:G (3.05) BS01 rna ? GO:0000049 ... P17291 15558050
    63722 1xnq:H (3.05) BS01 rna ? GO:0003735 ... P0DOY9 15558050
    63723 1xnq:I (3.05) BS01 rna ? GO:0003723 ... P80374 15558050
    63724 1xnq:J (3.05) BS01 rna ? GO:0000049 ... Q5SHN7 15558050
    63725 1xnq:J (3.05) BS02 MG ? GO:0000049 ... Q5SHN7 15558050
    63726 1xnq:K (3.05) BS01 rna ? GO:0003735 ... P80376 15558050
    63727 1xnq:L (3.05) BS01 rna ? GO:0000049 ... Q5SHN3 15558050
    63728 1xnq:L (3.05) BS02 MG ? GO:0000049 ... Q5SHN3 15558050
    63729 1xnq:M (3.05) BS01 rna ? GO:0000049 ... P80377 15558050
    63730 1xnq:N (3.05) BS01 rna ? GO:0003735 ... P0DOY6 15558050
    63731 1xnq:N (3.05) BS02 ZN ? GO:0003735 ... P0DOY6 15558050
    63732 1xnq:O (3.05) BS01 rna ? GO:0003735 ... Q5SJ76 15558050
    63733 1xnq:P (3.05) BS01 rna ? GO:0003735 ... Q5SJH3 15558050
    63734 1xnq:Q (3.05) BS01 rna ? GO:0003735 ... P0DOY7 15558050
    63735 1xnq:R (3.05) BS01 rna ? GO:0003735 ... Q5SLQ0 15558050
    63736 1xnq:S (3.05) BS01 rna ? GO:0000028 ... Q5SHP2 15558050
    63737 1xnq:T (3.05) BS01 rna ? GO:0003723 ... P80380 15558050
    63738 1xnr:B (3.1) BS01 rna ? GO:0003735 ... P80371 15558050
    63739 1xnr:C (3.1) BS01 rna ? GO:0003676 ... P80372 15558050
    63740 1xnr:D (3.1) BS01 rna ? GO:0003723 ... P80373 15558050
    63741 1xnr:E (3.1) BS01 rna ? GO:0003723 ... Q5SHQ5 15558050
    63742 1xnr:F (3.1) BS01 rna ? GO:0003735 ... Q5SLP8 15558050
    63743 1xnr:G (3.1) BS01 rna ? GO:0000049 ... P17291 15558050
    63744 1xnr:H (3.1) BS01 rna ? GO:0003735 ... P0DOY9 15558050
    63745 1xnr:I (3.1) BS01 rna ? GO:0003723 ... P80374 15558050
    63746 1xnr:J (3.1) BS01 rna ? GO:0000049 ... Q5SHN7 15558050
    63747 1xnr:J (3.1) BS02 MG ? GO:0000049 ... Q5SHN7 15558050
    63748 1xnr:K (3.1) BS01 rna ? GO:0003735 ... P80376 15558050
    63749 1xnr:L (3.1) BS01 rna ? GO:0000049 ... Q5SHN3 15558050
    63750 1xnr:L (3.1) BS02 MG ? GO:0000049 ... Q5SHN3 15558050
    63751 1xnr:M (3.1) BS01 rna ? GO:0000049 ... P80377 15558050
    63752 1xnr:N (3.1) BS01 rna ? GO:0003735 ... P0DOY6 15558050
    63753 1xnr:N (3.1) BS02 ZN ? GO:0003735 ... P0DOY6 15558050
    63754 1xnr:O (3.1) BS01 rna ? GO:0003735 ... Q5SJ76 15558050
    63755 1xnr:P (3.1) BS01 rna ? GO:0003735 ... Q5SJH3 15558050
    63756 1xnr:Q (3.1) BS01 rna ? GO:0003735 ... P0DOY7 15558050
    63757 1xnr:R (3.1) BS01 rna ? GO:0003735 ... Q5SLQ0 15558050
    63758 1xnr:S (3.1) BS01 rna ? GO:0000028 ... Q5SHP2 15558050
    63759 1xnr:T (3.1) BS01 rna ? GO:0003723 ... P80380 15558050
    63760 1xns:A (2.8) BS01 dna ? GO:0003677 ... P06956 15591069
    63761 1xns:A (2.8) BS02 dna ? GO:0003677 ... P06956 15591069
    63762 1xns:B (2.8) BS01 dna ? GO:0003677 ... P06956 15591069
    63763 1xns:B (2.8) BS02 dna ? GO:0003677 ... P06956 15591069
    63764 1xnx:A (2.9) BS01 ATE ? GO:0003677 ... O35627 15610734 BindingDB: IC50=250nM
    63765 1xnx:B (2.9) BS01 ATE ? GO:0003677 ... O35627 15610734 BindingDB: IC50=250nM
    63766 1xny:A (2.2) BS01 1VU 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63767 1xny:A (2.2) BS02 BTN 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63768 1xny:A (2.2) BS03 1VU 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63769 1xny:A (2.2) BS04 BTN 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63770 1xny:B (2.2) BS01 1VU 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63771 1xny:B (2.2) BS02 BTN 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63772 1xny:B (2.2) BS03 1VU 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63773 1xny:B (2.2) BS04 BTN 6.4.1.3 GO:0003989 ... Q9X4K7 15518551
    63774 1xnz:A (1.52) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 15506752
    63775 1xnz:A (1.52) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 15506752
    63776 1xnz:A (1.52) BS03 FCD 3.4.11.18 GO:0004239 ... P0AE18 15506752 MOAD: ic50=0.24uM
    BindingDB: IC50=116000nM
    63777 1xo0:A (2.0) BS01 dna ? GO:0003677 ... P06956 15591069
    63778 1xo0:B (2.0) BS01 dna ? GO:0003677 ... P06956 15591069
    63779 1xo0:B (2.0) BS02 dna ? GO:0003677 ... P06956 15591069
    63780 1xo2:B (2.9) BS01 FSE 2.7.11.22 GO:0000082 ... Q00534 15689157 BindingDB: IC50=850nM
    63781 1xo5:A (1.99) BS01 CA ? GO:0000287 ... Q99828 15574431
    63782 1xo5:A (1.99) BS02 CA ? GO:0000287 ... Q99828 15574431
    63783 1xo5:A (1.99) BS03 CA ? GO:0000287 ... Q99828 15574431
    63784 1xo5:B (1.99) BS01 CA ? GO:0000287 ... Q99828 15574431
    63785 1xo5:B (1.99) BS02 CA ? GO:0000287 ... Q99828 15574431
    63786 1xo5:B (1.99) BS03 CA ? GO:0000287 ... Q99828 15574431
    63787 1xoc:A (1.55) BS01 peptide ? GO:0005886 ... P42061 15588833
    63788 1xoc:A (1.55) BS02 ZN ? GO:0005886 ... P42061 15588833
    63789 1xoc:A (1.55) BS03 ZN ? GO:0005886 ... P42061 15588833
    63790 1xoe:A (2.2) BS01 ABX 3.2.1.18 GO:0004308 ... P03472 15582424 MOAD: ic50=41nM
    63791 1xog:A (2.8) BS01 ABW 3.2.1.18 GO:0004308 ... P03472 15582424
    63792 1xoi:A (2.1) BS01 NBG 2.4.1.1 GO:0002060 ... P06737 15603973
    63793 1xoi:A (2.1) BS02 PLP 2.4.1.1 GO:0002060 ... P06737 15603973
    63794 1xoi:A (2.1) BS03 288 2.4.1.1 GO:0002060 ... P06737 15603973 MOAD: ic50=0.057uM
    63795 1xoi:A (2.1) BS04 288 2.4.1.1 GO:0002060 ... P06737 15603973 MOAD: ic50=0.057uM
    63796 1xoi:B (2.1) BS01 288 2.4.1.1 GO:0002060 ... P06737 15603973 MOAD: ic50=0.057uM
    63797 1xoi:B (2.1) BS02 NBG 2.4.1.1 GO:0002060 ... P06737 15603973
    63798 1xoi:B (2.1) BS03 PLP 2.4.1.1 GO:0002060 ... P06737 15603973
    63799 1xoi:B (2.1) BS04 288 2.4.1.1 GO:0002060 ... P06737 15603973 MOAD: ic50=0.057uM
    63800 1xom:A (1.55) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 15576036

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).