SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    64201 1xtv:C (2.6) BS01 U5P 2.4.2.9 GO:0000287 ... Q980Q4 15654744
    64202 1xtv:E (2.6) BS01 U5P 2.4.2.9 GO:0000287 ... Q980Q4 15654744
    64203 1xtv:G (2.6) BS01 U5P 2.4.2.9 GO:0000287 ... Q980Q4 15654744
    64204 1xu3:A (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64205 1xu3:A (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64206 1xu3:A (2.3) BS03 BML 1.14.13.25 GO:0005515 ... P22869 15839679
    64207 1xu3:B (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64208 1xu3:B (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64209 1xu3:B (2.3) BS03 BML 1.14.13.25 GO:0005515 ... P22869 15839679
    64210 1xu4:A (2.4) BS01 MG ? GO:0000166 ... O73948 15537659
    64211 1xu4:A (2.4) BS02 ANP ? GO:0000166 ... O73948 15537659
    64212 1xu5:A (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64213 1xu5:A (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64214 1xu5:B (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64215 1xu5:B (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64216 1xu7:A (1.8) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64217 1xu7:B (1.8) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64218 1xu7:C (1.8) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64219 1xu7:D (1.8) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64220 1xu9:A (1.55) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64221 1xu9:B (1.55) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64222 1xu9:C (1.55) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64223 1xu9:D (1.55) BS01 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 15513927
    64224 1xua:A (1.9) BS01 HHA 5.3.3.17 GO:0002047 ... Q51792 15545603
    64225 1xua:B (1.9) BS01 HHA 5.3.3.17 GO:0002047 ... Q51792 15545603
    64226 1xuc:A (1.7) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734645
    64227 1xuc:A (1.7) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734645
    64228 1xuc:A (1.7) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734645
    64229 1xuc:A (1.7) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734645
    64230 1xuc:A (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    BindingDB: IC50=72nM
    64231 1xuc:B (1.7) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734645
    64232 1xuc:B (1.7) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734645
    64233 1xuc:B (1.7) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734645
    64234 1xuc:B (1.7) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734645
    64235 1xuc:B (1.7) BS05 PB3 3.4.24.- GO:0004222 ... P45452 15734645 MOAD: ic50=72nM
    BindingDB: IC50=72nM
    64236 1xud:A (1.8) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64237 1xud:A (1.8) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64238 1xud:A (1.8) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64239 1xud:A (1.8) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64240 1xud:A (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    64241 1xud:B (1.8) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64242 1xud:B (1.8) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64243 1xud:B (1.8) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64244 1xud:B (1.8) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64245 1xud:B (1.8) BS05 PB4 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=8nM
    BindingDB: IC50=8nM
    64246 1xuf:A (1.9) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142
    64247 1xuf:A (1.9) BS02 BAZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    64248 1xug:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142
    64249 1xug:A (1.5) BS02 ZN 3.4.21.4 GO:0004175 ... P00760 9468142
    64250 1xug:A (1.5) BS03 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=0.09uM
    64251 1xuh:A (2.2) BS01 CO 3.4.21.4 GO:0004175 ... P00760 9468142
    64252 1xuh:A (2.2) BS02 CA 3.4.21.4 GO:0004175 ... P00760 9468142
    64253 1xuh:A (2.2) BS03 BAO 3.4.21.4 GO:0004175 ... P00760 9468142
    64254 1xui:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142 Manual survey: Ki=19uM (9468142)
    64255 1xui:A (1.5) BS02 BAO 3.4.21.4 GO:0004175 ... P00760 9468142 Manual survey: Ki=19uM (9468142)
    64256 1xuj:A (1.92) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142
    64257 1xuj:A (1.92) BS02 BOZ 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki<1nM
    64258 1xuk:A (1.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 9468142
    64259 1xuk:A (1.8) BS02 BAB 3.4.21.4 GO:0004175 ... P00760 9468142 MOAD: Ki=19uM
    64260 1xuo:A (1.8) BS01 MG ? N/A P20701 15686945
    64261 1xuo:A (1.8) BS02 LA1 ? N/A P20701 15686945 MOAD: ic50=69nM
    BindingDB: IC50=69nM
    64262 1xuo:B (1.8) BS01 MG ? N/A P20701 15686945
    64263 1xup:O (2.75) BS01 GOL 2.7.1.30 GO:0004370 ... O34153 14717590
    64264 1xup:X (2.75) BS01 GOL 2.7.1.30 GO:0004370 ... O34153 14717590
    64265 1xuq:A (1.8) BS01 MN 1.15.1.1 GO:0004784 ... Q81LW0 16511113
    64266 1xuq:B (1.8) BS01 MN 1.15.1.1 GO:0004784 ... Q81LW0 16511113
    64267 1xur:A (1.85) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64268 1xur:A (1.85) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64269 1xur:A (1.85) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64270 1xur:A (1.85) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64271 1xur:A (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    BindingDB: IC50=6600nM
    64272 1xur:B (1.85) BS01 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64273 1xur:B (1.85) BS02 ZN 3.4.24.- GO:0004222 ... P45452 15734640
    64274 1xur:B (1.85) BS03 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64275 1xur:B (1.85) BS04 CA 3.4.24.- GO:0004222 ... P45452 15734640
    64276 1xur:B (1.85) BS05 PB5 3.4.24.- GO:0004222 ... P45452 15734640 MOAD: ic50=6600nM
    BindingDB: IC50=6600nM
    64277 1xuu:A (1.9) BS01 MN ? GO:0016051 ... Q57265 15516336
    64278 1xuz:A (2.2) BS01 MMN ? GO:0016051 ... Q57265 15516336
    64279 1xuz:A (2.2) BS02 MN ? GO:0016051 ... Q57265 15516336
    64280 1xuz:A (2.2) BS03 PEP ? GO:0016051 ... Q57265 15516336
    64281 1xv2:A (2.0) BS01 ZN 4.1.1.5 GO:0045151 ... N/A N/A
    64282 1xv2:B (2.0) BS01 ZN 4.1.1.5 GO:0045151 ... N/A N/A
    64283 1xv2:C (2.0) BS01 ZN 4.1.1.5 GO:0045151 ... N/A N/A
    64284 1xv2:D (2.0) BS01 ZN 4.1.1.5 GO:0045151 ... N/A N/A
    64285 1xv5:A (1.73) BS01 UDP 2.4.1.26 GO:0006304 ... P04519 16081100
    64286 1xv8:A (3.0) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 N/A
    64287 1xv8:B (3.0) BS01 CA 3.2.1.1 GO:0003824 ... P0DUB6 N/A
    64288 1xv9:A (2.7) BS01 peptide ? GO:0003677 ... P19793 15610735
    64289 1xv9:A (2.7) BS02 F15 ? GO:0003677 ... P19793 15610735
    64290 1xv9:B (2.7) BS01 peptide ? GO:0003677 ... Q14994 15610735
    64291 1xv9:B (2.7) BS02 CI2 ? GO:0003677 ... Q14994 15610735
    64292 1xv9:C (2.7) BS01 peptide ? GO:0003677 ... P19793 15610735
    64293 1xv9:C (2.7) BS02 F15 ? GO:0003677 ... P19793 15610735
    64294 1xv9:D (2.7) BS01 peptide ? GO:0003677 ... Q14994 15610735
    64295 1xva:A (2.2) BS01 SAM 2.1.1.20 GO:0005542 ... P13255 8810903
    64296 1xva:B (2.2) BS01 ACT 2.1.1.20 GO:0005542 ... P13255 8810903
    64297 1xva:B (2.2) BS02 SAM 2.1.1.20 GO:0005542 ... P13255 8810903
    64298 1xvb:A (1.8) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64299 1xvb:A (1.8) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64300 1xvb:A (1.8) BS03 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64301 1xvb:A (1.8) BS04 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64302 1xvb:A (1.8) BS05 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64303 1xvb:A (1.8) BS06 BBU 1.14.13.25 GO:0005515 ... P22869 15839679
    64304 1xvb:A (1.8) BS07 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64305 1xvb:B (1.8) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64306 1xvb:B (1.8) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64307 1xvb:B (1.8) BS03 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64308 1xvb:B (1.8) BS04 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64309 1xvb:B (1.8) BS05 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64310 1xvb:B (1.8) BS06 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64311 1xvb:B (1.8) BS07 BHL 1.14.13.25 GO:0005515 ... P22869 15839679
    64312 1xvc:A (2.0) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64313 1xvc:A (2.0) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64314 1xvc:B (2.0) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64315 1xvc:B (2.0) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64316 1xvd:A (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64317 1xvd:A (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64318 1xvd:A (2.3) BS03 FPN 1.14.13.25 GO:0005515 ... P22869 15839679
    64319 1xvd:B (2.3) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64320 1xvd:B (2.3) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64321 1xvd:B (2.3) BS03 FPN 1.14.13.25 GO:0005515 ... P22869 15839679
    64322 1xve:A (2.4) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64323 1xve:A (2.4) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64324 1xve:A (2.4) BS03 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64325 1xve:A (2.4) BS04 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64326 1xve:A (2.4) BS05 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64327 1xve:A (2.4) BS06 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64328 1xve:B (2.4) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64329 1xve:B (2.4) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64330 1xve:B (2.4) BS03 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64331 1xve:B (2.4) BS04 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64332 1xve:B (2.4) BS05 3BB 1.14.13.25 GO:0005515 ... P22869 15839679
    64333 1xve:C (2.4) BS01 3BB 1.14.13.25 GO:0005515 ... P18798 15839679
    64334 1xve:C (2.4) BS02 3BB 1.14.13.25 GO:0005515 ... P18798 15839679
    64335 1xvf:A (2.0) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64336 1xvf:A (2.0) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64337 1xvf:A (2.0) BS03 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64338 1xvf:A (2.0) BS04 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64339 1xvf:A (2.0) BS05 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64340 1xvf:A (2.0) BS06 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64341 1xvf:B (2.0) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64342 1xvf:B (2.0) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64343 1xvf:B (2.0) BS03 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64344 1xvf:B (2.0) BS04 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64345 1xvf:B (2.0) BS05 3CL 1.14.13.25 GO:0005515 ... P22869 15839679
    64346 1xvf:D (2.0) BS01 3CL 1.14.13.25 GO:0005515 ... P18798 15839679
    64347 1xvg:A (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64348 1xvg:A (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64349 1xvg:A (1.96) BS03 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64350 1xvg:A (1.96) BS04 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64351 1xvg:A (1.96) BS05 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64352 1xvg:A (1.96) BS06 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64353 1xvg:B (1.96) BS01 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64354 1xvg:B (1.96) BS02 FE 1.14.13.25 GO:0005515 ... P22869 15839679
    64355 1xvg:B (1.96) BS03 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64356 1xvg:B (1.96) BS04 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64357 1xvg:B (1.96) BS05 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64358 1xvg:B (1.96) BS06 BRJ 1.14.13.25 GO:0005515 ... P22869 15839679
    64359 1xvg:C (1.96) BS01 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64360 1xvg:C (1.96) BS02 CA 1.14.13.25 GO:0005515 ... P18798 15839679
    64361 1xvg:C (1.96) BS03 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64362 1xvg:C (1.96) BS04 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64363 1xvg:D (1.96) BS01 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64364 1xvg:D (1.96) BS02 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64365 1xvg:D (1.96) BS03 BRJ 1.14.13.25 GO:0005515 ... P18798 15839679
    64366 1xvj:A (1.8) BS01 CA ? GO:0005509 ... P02625 16101280
    64367 1xvj:A (1.8) BS02 CA ? GO:0005509 ... P02625 16101280
    64368 1xvj:B (1.8) BS01 CA ? GO:0005509 ... P02625 16101280
    64369 1xvj:B (1.8) BS02 CA ? GO:0005509 ... P02625 16101280
    64370 1xvl:A (2.9) BS01 MN ? GO:0007155 ... Q79EF9 15843026
    64371 1xvl:B (2.9) BS01 MN ? GO:0007155 ... Q79EF9 15843026
    64372 1xvl:C (2.9) BS01 MN ? GO:0007155 ... Q79EF9 15843026
    64373 1xvm:A (1.1) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 16041079
    64374 1xvp:A (2.6) BS01 peptide ? GO:0003677 ... P19793 15610735
    64375 1xvp:A (2.6) BS02 F15 ? GO:0003677 ... P19793 15610735
    64376 1xvp:B (2.6) BS01 peptide ? GO:0003677 ... Q14994 15610735
    64377 1xvp:C (2.6) BS01 peptide ? GO:0003677 ... P19793 15610735
    64378 1xvp:C (2.6) BS02 F15 ? GO:0003677 ... P19793 15610735
    64379 1xvp:D (2.6) BS01 peptide ? GO:0003677 ... Q14994 15610735
    64380 1xvp:D (2.6) BS02 CID ? GO:0003677 ... Q14994 15610735 BindingDB: EC50=49nM
    64381 1xvt:A (2.3) BS01 COA 2.8.3.21 GO:0003824 ... P31572 15823031
    64382 1xvu:A (2.4) BS01 COA 2.8.3.21 GO:0003824 ... P31572 15823031
    64383 1xvv:A (2.4) BS01 CCQ 2.8.3.21 GO:0003824 ... P31572 15823031
    64384 1xvx:A (1.53) BS01 FE ? GO:0030288 ... A1JLH5 15576371
    64385 1xvx:A (1.53) BS02 ZN ? GO:0030288 ... A1JLH5 15576371
    64386 1xvx:A (1.53) BS03 ZN ? GO:0030288 ... A1JLH5 15576371
    64387 1xvx:A (1.53) BS04 CO3 ? GO:0030288 ... A1JLH5 15576371
    64388 1xw3:A (1.65) BS01 PO4 1.8.98.2 GO:0032542 ... Q9BYN0 15952770
    64389 1xw4:X (2.0) BS01 ADP 1.8.98.2 GO:0032542 ... Q9BYN0 15952770
    64390 1xw5:A (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... P28161 N/A
    64391 1xw5:B (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... P28161 N/A
    64392 1xw6:A (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    64393 1xw6:B (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    64394 1xw6:C (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    64395 1xw6:D (1.9) BS01 GSH 2.5.1.18 GO:0004364 ... P09488 16548513 MOAD: Kd=2.4uM
    64396 1xw7:B (2.3) BS01 peptide ? GO:0005179 ... P01308 15794638
    64397 1xw7:D (2.3) BS01 peptide ? GO:0005179 ... P01308 15794638
    64398 1xwf:A (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 16061414
    64399 1xwf:A (2.8) BS02 ADN 3.13.2.1 GO:0001666 ... P10760 16061414
    64400 1xwf:A (2.8) BS03 NAD 3.13.2.1 GO:0001666 ... P10760 16061414

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).