SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7001 1cgy:A (2.5) BS07 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    7002 1cgy:A (2.5) BS08 CA 2.4.1.19 GO:0003824 ... P43379 7880832
    7003 1cgz:A (1.7) BS01 STL 2.3.1.74 GO:0009058 ... P30074 10426957
    7004 1ch0:A (2.3) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 10600381
    7005 1ch0:C (2.3) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 10600381
    7006 1ch1:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7007 1ch2:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7008 1ch3:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7009 1ch4:A (2.5) BS01 HEM ? GO:0004601 ... P68871 10080899
    7010 1ch4:B (2.5) BS01 HEM ? GO:0004601 ... P68871 10080899
    7011 1ch4:C (2.5) BS01 HEM ? GO:0004601 ... P68871 10080899
    7012 1ch4:D (2.5) BS01 HEM ? GO:0004601 ... P68871 10080899
    7013 1ch5:A (2.1) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7014 1ch7:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7015 1ch8:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7016 1ch8:A (2.5) BS02 GPX 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7017 1ch8:A (2.5) BS03 HDA 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7018 1ch8:A (2.5) BS04 IMP 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7019 1ch9:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7020 1chc:A (-1.00) BS01 ZN 2.3.2.27 GO:0046872 ... P28990 8126734
    7021 1chc:A (-1.00) BS02 ZN 2.3.2.27 GO:0046872 ... P28990 8126734
    7022 1chh:A (1.97) BS01 HEC ? GO:0005515 ... P00044 7819192
    7023 1chi:A (2.0) BS01 HEC ? GO:0005515 ... P00044 7819192
    7024 1chj:A (1.9) BS01 HEC ? GO:0005515 ... P00044 7819192
    7025 1chm:A (1.9) BS01 CMS 3.5.3.3 GO:0016980 ... P38488 1696320 MOAD: Ki=0.22mM
    7026 1chm:A (1.9) BS02 CMS 3.5.3.3 GO:0016980 ... P38488 1696320 MOAD: Ki=0.22mM
    7027 1chm:B (1.9) BS01 CMS 3.5.3.3 GO:0016980 ... P38488 1696320 MOAD: Ki=0.22mM
    7028 1chm:B (1.9) BS02 CMS 3.5.3.3 GO:0016980 ... P38488 1696320 MOAD: Ki=0.22mM
    7029 1chn:A (1.76) BS01 MG ? GO:0000156 ... P0AE67 8176739
    7030 1cho:F (1.8) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 3477645
    7031 1cho:G (1.8) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 3477645
    7032 1chw:A (1.9) BS01 HXC 2.3.1.74 GO:0009058 ... P30074 10426957
    7033 1chw:B (1.9) BS01 HXC 2.3.1.74 GO:0009058 ... P30074 10426957
    7034 1ci0:A (2.7) BS01 FMN 1.4.3.5 GO:0004733 ... P38075 N/A
    7035 1ci0:A (2.7) BS02 FMN 1.4.3.5 GO:0004733 ... P38075 N/A
    7036 1ci0:B (2.7) BS01 FMN 1.4.3.5 GO:0004733 ... P38075 N/A
    7037 1ci0:B (2.7) BS02 FMN 1.4.3.5 GO:0004733 ... P38075 N/A
    7038 1ci1:B (2.0) BS01 HEX 5.3.1.1 GO:0004807 ... P52270 10468562
    7039 1ci3:M (1.9) BS01 ZN ? GO:0005506 ... P95522 10423236
    7040 1ci3:M (1.9) BS02 HEC ? GO:0005506 ... P95522 10423236
    7041 1ci7:A (2.6) BS01 UMP 2.1.1.45 GO:0004799 ... P13100 10529228
    7042 1ci7:A (2.6) BS02 UMP 2.1.1.45 GO:0004799 ... P13100 10529228
    7043 1ci7:B (2.6) BS01 UMP 2.1.1.45 GO:0004799 ... P13100 10529228
    7044 1ci7:B (2.6) BS02 UMP 2.1.1.45 GO:0004799 ... P13100 10529228
    7045 1ci9:A (1.8) BS01 DFP 3.1.1.- GO:0005737 ... Q9KX40 11847270
    7046 1ci9:B (1.8) BS01 DFP 3.1.1.- GO:0005737 ... Q9KX40 11847270
    7047 1cia:A (2.5) BS01 CO 2.3.1.28 GO:0008811 ... P00484 7906544
    7048 1cib:A (2.3) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7049 1cib:A (2.3) BS02 GDP 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7050 1cib:A (2.3) BS03 HDA 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7051 1cib:A (2.3) BS04 IMP 6.3.4.4 GO:0000166 ... P0A7D4 10364182
    7052 1cie:A (1.8) BS01 HEC ? GO:0005515 ... P00044 7711047
    7053 1cif:A (1.9) BS01 HEC ? GO:0005515 ... P00044 7711047
    7054 1cig:A (1.8) BS01 HEC ? GO:0005515 ... P00044 7711047
    7055 1cih:A (1.8) BS01 HEC ? GO:0005515 ... P00044 7711047
    7056 1cij:A (2.3) BS01 BR 3.8.1.5 GO:0003824 ... P22643 10508409
    7057 1cij:A (2.3) BS02 BR 3.8.1.5 GO:0003824 ... P22643 10508409
    7058 1cij:A (2.3) BS03 BR 3.8.1.5 GO:0003824 ... P22643 10508409
    7059 1cik:A (1.7) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7060 1cil:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888
    7061 1cil:A (1.6) BS02 ETS 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888 MOAD: Ki=0.372nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    7062 1cim:A (2.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888
    7063 1cim:A (2.1) BS02 PTS 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888 MOAD: Ki=1.52nM
    BindingDB: Ki=1.5nM
    7064 1cin:A (2.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888
    7065 1cin:A (2.1) BS02 MTS 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 8142888 MOAD: Ki=1.88nM
    BindingDB: Ki=1.9nM
    7066 1cio:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7067 1cip:A (1.5) BS01 MG ? GO:0000287 ... P10824 10358003
    7068 1cip:A (1.5) BS02 GNP ? GO:0000287 ... P10824 10358003
    7069 1ciq:A (2.2) BS01 peptide ? GO:0004867 ... P01053 9079381
    7070 1cir:A (-1.00) BS01 peptide ? GO:0004867 ... P01053 9079381
    7071 1cit:A (2.7) BS01 dna ? GO:0003700 ... P22829 10331876
    7072 1cit:A (2.7) BS02 dna ? GO:0003700 ... P22829 10331876
    7073 1cit:A (2.7) BS03 ZN ? GO:0003700 ... P22829 10331876
    7074 1cit:A (2.7) BS04 ZN ? GO:0003700 ... P22829 10331876
    7075 1ciu:A (2.3) BS01 CA 2.4.1.19 GO:0003824 ... P26827 8604143
    7076 1ciu:A (2.3) BS02 CA 2.4.1.19 GO:0003824 ... P26827 8604143
    7077 1civ:A (2.8) BS01 NAP 1.1.1.82 GO:0003824 ... P46489 10196131
    7078 1ciw:A (2.7) BS01 GAL ? GO:0030246 ... P02872 10417405
    7079 1ciw:A (2.7) BS02 CA ? GO:0030246 ... P02872 10417405
    7080 1ciw:A (2.7) BS03 MN ? GO:0030246 ... P02872 10417405
    7081 1ciw:B (2.7) BS01 GAL ? GO:0030246 ... P02872 10417405
    7082 1ciw:B (2.7) BS02 CA ? GO:0030246 ... P02872 10417405
    7083 1ciw:B (2.7) BS03 MN ? GO:0030246 ... P02872 10417405
    7084 1ciw:C (2.7) BS01 GAL ? GO:0030246 ... P02872 10417405
    7085 1ciw:C (2.7) BS02 CA ? GO:0030246 ... P02872 10417405
    7086 1ciw:C (2.7) BS03 MN ? GO:0030246 ... P02872 10417405
    7087 1ciw:D (2.7) BS01 GAL ? GO:0030246 ... P02872 10417405
    7088 1ciw:D (2.7) BS02 CA ? GO:0030246 ... P02872 10417405
    7089 1ciw:D (2.7) BS03 MN ? GO:0030246 ... P02872 10417405
    7090 1ciz:A (1.64) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    7091 1ciz:A (1.64) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    7092 1ciz:A (1.64) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    7093 1ciz:A (1.64) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    7094 1ciz:A (1.64) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    7095 1ciz:A (1.64) BS06 DPS 3.4.24.17 GO:0004222 ... P08254 10422833 MOAD: Ki=36nM
    7096 1cj0:A (2.8) BS01 PLP 2.1.2.1 GO:0000900 ... P07511 10387080
    7097 1cj0:A (2.8) BS02 PLP 2.1.2.1 GO:0000900 ... P07511 10387080
    7098 1cj0:B (2.8) BS01 PLP 2.1.2.1 GO:0000900 ... P07511 10387080
    7099 1cj0:B (2.8) BS02 PLP 2.1.2.1 GO:0000900 ... P07511 10387080
    7100 1cj1:A (3.0) BS01 C78 ? N/A P62993 10395476
    7101 1cj1:B (3.0) BS01 C78 ? N/A P62993 10395476
    7102 1cj1:C (3.0) BS01 C78 ? N/A P62993 10395476
    7103 1cj1:D (3.0) BS01 C78 ? N/A P62993 10395476
    7104 1cj1:E (3.0) BS01 C78 ? N/A P62993 10395476
    7105 1cj1:F (3.0) BS01 C78 ? N/A P62993 10395476
    7106 1cj1:G (3.0) BS01 C78 ? N/A P62993 10395476
    7107 1cj1:H (3.0) BS01 C78 ? N/A P62993 10395476
    7108 1cj1:I (3.0) BS01 C78 ? N/A P62993 10395476
    7109 1cj1:J (3.0) BS01 C78 ? N/A P62993 10395476
    7110 1cj1:K (3.0) BS01 C78 ? N/A P62993 10395476
    7111 1cj1:L (3.0) BS01 C78 ? N/A P62993 10395476
    7112 1cj2:A (2.8) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 10493859
    7113 1cj3:A (2.5) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 10493859
    7114 1cj4:A (2.4) BS01 FAD 1.14.13.2 GO:0016491 ... P00438 10493859
    7115 1cja:A (2.9) BS01 AMP 2.7.11.1 N/A P80197 10357805
    7116 1cja:B (2.9) BS01 AMP 2.7.11.1 N/A P80197 10357805
    7117 1cjb:A (2.0) BS01 IRP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693 MOAD: Kd=1nM
    7118 1cjb:A (2.0) BS02 POP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693
    7119 1cjb:B (2.0) BS01 IRP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693 MOAD: Kd=1nM
    7120 1cjb:B (2.0) BS02 POP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693
    7121 1cjb:C (2.0) BS01 IRP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693 MOAD: Kd=1nM
    7122 1cjb:C (2.0) BS02 POP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693
    7123 1cjb:D (2.0) BS01 IRP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693 MOAD: Kd=1nM
    7124 1cjb:D (2.0) BS02 POP 2.4.2.22
    2.4.2.8
    GO:0000287 ... P20035 10433693
    7125 1cjc:A (1.7) BS01 FAD 1.18.1.6 GO:0004324 ... P08165 10369776
    7126 1cje:A (2.5) BS01 FES ? GO:0051536 ... P00257 10620322
    7127 1cje:B (2.5) BS01 FES ? GO:0051536 ... P00257 10620322
    7128 1cje:C (2.5) BS01 FES ? GO:0051536 ... P00257 10620322
    7129 1cje:D (2.5) BS01 FES ? GO:0051536 ... P00257 10620322
    7130 1cjf:A (2.3) BS01 peptide ? GO:0000774 ... P07737 10404225
    7131 1cjf:B (2.3) BS01 peptide ? GO:0000774 ... P07737 10404225
    7132 1cjf:B (2.3) BS02 peptide ? GO:0000774 ... P07737 10404225
    7133 1cjg:A (-1.00) BS01 dna ? GO:0003677 ... P03023 10647179
    7134 1cjg:A (-1.00) BS02 dna ? GO:0003677 ... P03023 10647179
    7135 1cjg:B (-1.00) BS01 dna ? GO:0003677 ... P03023 10647179
    7136 1cjg:B (-1.00) BS02 dna ? GO:0003677 ... P03023 10647179
    7137 1cjk:A (3.0) BS01 MG 4.6.1.1 GO:0009190 ... P30803 10427002
    7138 1cjk:A (3.0) BS02 MN 4.6.1.1 GO:0009190 ... P30803 10427002
    7139 1cjk:A (3.0) BS03 TAT 4.6.1.1 GO:0009190 ... P30803 10427002
    7140 1cjk:B (3.0) BS01 TAT 4.6.1.1 GO:0009190 ... P26769 10427002
    7141 1cjk:C (3.0) BS01 MG ? GO:0003924 ... P04896 10427002
    7142 1cjk:C (3.0) BS02 GSP ? GO:0003924 ... P04896 10427002
    7143 1cjp:A (2.78) BS01 MUG ? GO:0030246 ... P02866 9087912
    7144 1cjp:A (2.78) BS02 MN ? GO:0030246 ... P02866 9087912
    7145 1cjp:A (2.78) BS03 CA ? GO:0030246 ... P02866 9087912
    7146 1cjp:B (2.78) BS01 MUG ? GO:0030246 ... P02866 9087912
    7147 1cjp:B (2.78) BS02 MN ? GO:0030246 ... P02866 9087912
    7148 1cjp:B (2.78) BS03 CA ? GO:0030246 ... P02866 9087912
    7149 1cjp:C (2.78) BS01 MUG ? GO:0030246 ... P02866 9087912
    7150 1cjp:C (2.78) BS02 MN ? GO:0030246 ... P02866 9087912
    7151 1cjp:C (2.78) BS03 CA ? GO:0030246 ... P02866 9087912
    7152 1cjp:D (2.78) BS01 MUG ? GO:0030246 ... P02866 9087912
    7153 1cjp:D (2.78) BS02 MN ? GO:0030246 ... P02866 9087912
    7154 1cjp:D (2.78) BS03 CA ? GO:0030246 ... P02866 9087912
    7155 1cjq:B (3.0) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 10409822
    7156 1cjr:B (2.3) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 10409822
    7157 1cjt:A (2.8) BS01 MG 4.6.1.1 GO:0009190 ... P30803 10427002
    7158 1cjt:A (2.8) BS02 MN 4.6.1.1 GO:0009190 ... P30803 10427002
    7159 1cjt:A (2.8) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    7160 1cjt:A (2.8) BS04 DAD 4.6.1.1 GO:0009190 ... P30803 10427002
    7161 1cjt:B (2.8) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 10427002
    7162 1cjt:B (2.8) BS02 DAD 4.6.1.1 GO:0009190 ... P26769 10427002
    7163 1cjt:C (2.8) BS01 MG ? GO:0003924 ... P04896 10427002
    7164 1cjt:C (2.8) BS02 GSP ? GO:0003924 ... P04896 10427002
    7165 1cju:A (2.8) BS01 MG 4.6.1.1 GO:0009190 ... P30803 10427002
    7166 1cju:A (2.8) BS02 MG 4.6.1.1 GO:0009190 ... P30803 10427002
    7167 1cju:A (2.8) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    7168 1cju:A (2.8) BS04 DAD 4.6.1.1 GO:0009190 ... P30803 10427002
    7169 1cju:B (2.8) BS01 DAD 4.6.1.1 GO:0009190 ... P26769 10427002
    7170 1cju:C (2.8) BS01 MG ? GO:0003924 ... P04896 10427002
    7171 1cju:C (2.8) BS02 GSP ? GO:0003924 ... P04896 10427002
    7172 1cjv:A (3.0) BS01 MG 4.6.1.1 GO:0009190 ... P30803 10427002
    7173 1cjv:A (3.0) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    7174 1cjv:A (3.0) BS03 DAD 4.6.1.1 GO:0009190 ... P30803 10427002
    7175 1cjv:B (3.0) BS01 DAD 4.6.1.1 GO:0009190 ... P26769 10427002
    7176 1cjv:C (3.0) BS01 MG ? GO:0003924 ... P04896 10427002
    7177 1cjv:C (3.0) BS02 ZN ? GO:0003924 ... P04896 10427002
    7178 1cjv:C (3.0) BS03 GSP ? GO:0003924 ... P04896 10427002
    7179 1cjw:A (1.8) BS01 COT 2.3.1.87 GO:0016747 ... Q29495 10319816
    7180 1cjx:A (2.4) BS01 FE2 1.13.11.27 GO:0003868 ... P80064 10467142
    7181 1cjx:A (2.4) BS02 ACT 1.13.11.27 GO:0003868 ... P80064 10467142
    7182 1cjx:B (2.4) BS01 FE2 1.13.11.27 GO:0003868 ... P80064 10467142
    7183 1cjx:B (2.4) BS02 ACT 1.13.11.27 GO:0003868 ... P80064 10467142
    7184 1cjx:C (2.4) BS01 FE2 1.13.11.27 GO:0003868 ... P80064 10467142
    7185 1cjx:D (2.4) BS01 FE2 1.13.11.27 GO:0003868 ... P80064 10467142
    7186 1cjx:D (2.4) BS02 FE2 1.13.11.27 GO:0003868 ... P80064 10467142
    7187 1cjy:A (2.5) BS01 CA 3.1.1.4
    3.1.1.5
    GO:0000139 ... P47712 10319815
    7188 1cjy:A (2.5) BS02 CA 3.1.1.4
    3.1.1.5
    GO:0000139 ... P47712 10319815
    7189 1cjy:B (2.5) BS01 CA 3.1.1.4
    3.1.1.5
    GO:0000139 ... P47712 10319815
    7190 1cjy:B (2.5) BS02 CA 3.1.1.4
    3.1.1.5
    GO:0000139 ... P47712 10319815
    7191 1ck1:A (2.6) BS01 ZN ? GO:0005576 ... Q06535 11934896
    7192 1ck6:A (1.9) BS01 BMA 1.11.1.7 GO:0000302 ... P28313 10504224
    7193 1ck6:A (1.9) BS02 CA 1.11.1.7 GO:0000302 ... P28313 10504224
    7194 1ck6:A (1.9) BS03 CA 1.11.1.7 GO:0000302 ... P28313 10504224
    7195 1ck6:A (1.9) BS04 SHA 1.11.1.7 GO:0000302 ... P28313 10504224
    7196 1ck6:A (1.9) BS05 HEM 1.11.1.7 GO:0000302 ... P28313 10504224
    7197 1ck7:A (2.8) BS01 ZN 3.4.24.24 GO:0001525 ... P08253 10356396
    7198 1ck7:A (2.8) BS02 ZN 3.4.24.24 GO:0001525 ... P08253 10356396
    7199 1ck7:A (2.8) BS03 CA 3.4.24.24 GO:0001525 ... P08253 10356396
    7200 1ck7:A (2.8) BS04 CA 3.4.24.24 GO:0001525 ... P08253 10356396

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).