SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    731601 7wt0:A (2.0) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731602 7wt0:A (2.0) BS04 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731603 7wt0:B (2.0) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731604 7wt0:B (2.0) BS02 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731605 7wt0:B (2.0) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731606 7wt0:B (2.0) BS04 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731607 7wt1:A (1.85) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731608 7wt1:A (1.85) BS02 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731609 7wt1:B (1.85) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731610 7wt1:B (1.85) BS02 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731611 7wt2:A (2.0) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731612 7wt2:A (2.0) BS02 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731613 7wt2:A (2.0) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731614 7wt2:A (2.0) BS04 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731615 7wt2:B (2.0) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731616 7wt2:B (2.0) BS02 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731617 7wt2:B (2.0) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 35363883
    731618 7wt2:B (2.0) BS04 5ZO 4.4.1.5 GO:0004462 ... Q04760 35363883
    731619 7wt3:A (1.88766) BS01 peptide ? N/A A0A5H2UYS3 35667438
    731620 7wt3:A (1.88766) BS02 ZN ? N/A A0A5H2UYS3 35667438
    731621 7wt3:D (1.88766) BS01 peptide ? N/A A0A5H2UYS3 35667438
    731622 7wt3:D (1.88766) BS02 ZN ? N/A A0A5H2UYS3 35667438
    731623 7wt4:A (1.89459) BS01 peptide ? N/A A0A5H2UYS3 35667438
    731624 7wt4:A (1.89459) BS02 ZN ? N/A A0A5H2UYS3 35667438
    731625 7wt4:D (1.89459) BS01 peptide ? N/A A0A5H2UYS3 35667438
    731626 7wt4:D (1.89459) BS02 ZN ? N/A A0A5H2UYS3 35667438
    731627 7wt5:A (2.09508) BS01 peptide ? N/A A0A109QAI7 35667438
    731628 7wt5:D (2.09508) BS01 peptide ? N/A A0A109QAI7 35667438
    731629 7wt5:D (2.09508) BS02 ZN ? N/A A0A109QAI7 35667438
    731630 7wta:A (3.9) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731631 7wta:B (3.9) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731632 7wta:B (3.9) BS02 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731633 7wta:C (3.9) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731634 7wta:D (3.9) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731635 7wtb:A (3.7) BS01 ANP 6.4.1.1 GO:0003824 ... P11498 36283412
    731636 7wtb:A (3.7) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731637 7wtb:A (3.7) BS03 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731638 7wtb:A (3.7) BS04 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731639 7wtb:B (3.7) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731640 7wtb:B (3.7) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731641 7wtb:B (3.7) BS03 ANP 6.4.1.1 GO:0003824 ... P11498 36283412
    731642 7wtb:B (3.7) BS04 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731643 7wtb:C (3.7) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731644 7wtb:D (3.7) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731645 7wtc:A (4.0) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731646 7wtc:A (4.0) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731647 7wtc:A (4.0) BS03 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731648 7wtc:B (4.0) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731649 7wtc:B (4.0) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731650 7wtc:B (4.0) BS03 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731651 7wtc:C (4.0) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731652 7wtc:D (4.0) BS01 BTI 6.4.1.1 GO:0003824 ... P11498 36283412
    731653 7wtd:C (3.9) BS01 ATP 6.4.1.1 GO:0003824 ... P11498 36283412
    731654 7wtd:C (3.9) BS02 COA 6.4.1.1 GO:0003824 ... P11498 36283412
    731655 7wtd:C (3.9) BS03 COA 6.4.1.1 GO:0003824 ... P11498 36283412
    731656 7wtd:D (3.9) BS01 COA 6.4.1.1 GO:0003824 ... P11498 36283412
    731657 7wtd:D (3.9) BS02 COA 6.4.1.1 GO:0003824 ... P11498 36283412
    731658 7wtd:D (3.9) BS03 ATP 6.4.1.1 GO:0003824 ... P11498 36283412
    731659 7wte:C (3.3) BS01 ATP 6.4.1.1 GO:0003824 ... P11498 36283412
    731660 7wte:C (3.3) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731661 7wte:C (3.3) BS03 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731662 7wte:D (3.3) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731663 7wte:D (3.3) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    731664 7wte:D (3.3) BS03 ATP 6.4.1.1 GO:0003824 ... P11498 36283412
    731665 7wtl:CA (3.3) BS01 rna ? GO:0000056 ... Q99216 36263816
    731666 7wtl:CL (3.3) BS01 rna ? GO:0000462 ... Q08965 36263816
    731667 7wtl:CL (3.3) BS02 GTP ? GO:0000462 ... Q08965 36263816
    731668 7wtl:JL (3.3) BS01 rna 2.1.1.183 GO:0000154 ... P41819 36263816
    731669 7wtl:SB (3.3) BS01 rna ? GO:0000462 ... P33442 36263816
    731670 7wtl:SE (3.3) BS01 rna ? GO:0002181 ... P0CX35 36263816
    731671 7wtl:SG (3.3) BS01 rna ? GO:0000462 ... P0CX37 36263816
    731672 7wtl:SH (3.3) BS01 rna ? GO:0002181 ... P26786 36263816
    731673 7wtl:SI (3.3) BS01 rna ? GO:0000462 ... P0CX39 36263816
    731674 7wtl:SJ (3.3) BS01 rna ? GO:0000462 ... O13516 36263816
    731675 7wtl:SL (3.3) BS01 rna ? GO:0000028 ... P0CX47 36263816
    731676 7wtl:SN (3.3) BS01 rna ? GO:0000462 ... P05756 36263816
    731677 7wtl:SO (3.3) BS01 rna ? GO:0000028 ... P06367 36263816
    731678 7wtl:SW (3.3) BS01 rna ? GO:0002181 ... P0C0W1 36263816
    731679 7wtl:SX (3.3) BS01 rna ? GO:0000462 ... P0CX29 36263816
    731680 7wtl:SY (3.3) BS01 rna ? GO:0000462 ... P0CX31 36263816
    731681 7wtl:Sb (3.3) BS01 rna ? GO:0000028 ... P35997 36263816
    731682 7wtl:Sb (3.3) BS02 ZN ? GO:0000028 ... P35997 36263816
    731683 7wtl:UC (3.3) BS01 rna ? GO:0000447 ... Q12136 36263816
    731684 7wtm:CA (3.5) BS01 rna ? GO:0000056 ... Q99216 36263816
    731685 7wtm:JL (3.5) BS01 rna 2.1.1.183 GO:0000154 ... P41819 36263816
    731686 7wtm:SB (3.5) BS01 rna ? GO:0000462 ... P33442 36263816
    731687 7wtm:SE (3.5) BS01 rna ? GO:0002181 ... P0CX35 36263816
    731688 7wtm:SG (3.5) BS01 rna ? GO:0000462 ... P0CX37 36263816
    731689 7wtm:SH (3.5) BS01 rna ? GO:0002181 ... P26786 36263816
    731690 7wtm:SI (3.5) BS01 rna ? GO:0000462 ... P0CX39 36263816
    731691 7wtm:SJ (3.5) BS01 rna ? GO:0000462 ... O13516 36263816
    731692 7wtm:SJ (3.5) BS02 peptide ? GO:0000462 ... O13516 36263816
    731693 7wtm:SL (3.5) BS01 rna ? GO:0000028 ... P0CX47 36263816
    731694 7wtm:SN (3.5) BS01 rna ? GO:0000462 ... P05756 36263816
    731695 7wtm:SO (3.5) BS01 rna ? GO:0000028 ... P06367 36263816
    731696 7wtm:SW (3.5) BS01 rna ? GO:0002181 ... P0C0W1 36263816
    731697 7wtm:SX (3.5) BS01 rna ? GO:0000462 ... P0CX29 36263816
    731698 7wtm:SY (3.5) BS01 rna ? GO:0000462 ... P0CX31 36263816
    731699 7wtm:Sb (3.5) BS01 rna ? GO:0000028 ... P35997 36263816
    731700 7wtm:Sb (3.5) BS02 ZN ? GO:0000028 ... P35997 36263816
    731701 7wtn:CA (3.4) BS01 rna ? GO:0000056 ... Q99216 36321656
    731702 7wtn:CB (3.4) BS01 rna 2.1.1.309 GO:0000056 ... P25627 36321656
    731703 7wtn:SB (3.4) BS01 rna ? GO:0000462 ... P33442 36321656
    731704 7wtn:SC (3.4) BS01 rna ? GO:0000054 ... P25443 36321656
    731705 7wtn:SE (3.4) BS01 rna ? GO:0002181 ... P0CX35 36321656
    731706 7wtn:SG (3.4) BS01 rna ? GO:0000462 ... P0CX37 36321656
    731707 7wtn:SH (3.4) BS01 rna ? GO:0002181 ... P26786 36321656
    731708 7wtn:SI (3.4) BS01 rna ? GO:0000462 ... P0CX39 36321656
    731709 7wtn:SJ (3.4) BS01 rna ? GO:0000462 ... O13516 36321656
    731710 7wtn:SL (3.4) BS01 rna ? GO:0000028 ... P0CX47 36321656
    731711 7wtn:SN (3.4) BS01 rna ? GO:0000462 ... P05756 36321656
    731712 7wtn:SO (3.4) BS01 rna ? GO:0000028 ... P06367 36321656
    731713 7wtn:SW (3.4) BS01 rna ? GO:0002181 ... P0C0W1 36321656
    731714 7wtn:SX (3.4) BS01 rna ? GO:0000462 ... P0CX29 36321656
    731715 7wtn:SY (3.4) BS01 rna ? GO:0000462 ... P0CX31 36321656
    731716 7wtn:Sb (3.4) BS01 rna ? GO:0000028 ... P35997 36321656
    731717 7wtn:Sb (3.4) BS02 ZN ? GO:0000028 ... P35997 36321656
    731718 7wtn:Se (3.4) BS01 rna ? GO:0002181 ... P0CX33 36321656
    731719 7wto:CA (3.5) BS01 rna ? GO:0000056 ... Q99216 36321656
    731720 7wto:SB (3.5) BS01 rna ? GO:0000462 ... P33442 36321656
    731721 7wto:SE (3.5) BS01 rna ? GO:0002181 ... P0CX35 36321656
    731722 7wto:SG (3.5) BS01 rna ? GO:0000462 ... P0CX37 36321656
    731723 7wto:SH (3.5) BS01 rna ? GO:0002181 ... P26786 36321656
    731724 7wto:SI (3.5) BS01 rna ? GO:0000462 ... P0CX39 36321656
    731725 7wto:SJ (3.5) BS01 rna ? GO:0000462 ... O13516 36321656
    731726 7wto:SL (3.5) BS01 rna ? GO:0000028 ... P0CX47 36321656
    731727 7wto:SN (3.5) BS01 rna ? GO:0000462 ... P05756 36321656
    731728 7wto:SO (3.5) BS01 rna ? GO:0000028 ... P06367 36321656
    731729 7wto:SW (3.5) BS01 rna ? GO:0002181 ... P0C0W1 36321656
    731730 7wto:SX (3.5) BS01 rna ? GO:0000462 ... P0CX29 36321656
    731731 7wto:SY (3.5) BS01 rna ? GO:0000462 ... P0CX31 36321656
    731732 7wto:Sb (3.5) BS01 rna ? GO:0000028 ... P35997 36321656
    731733 7wto:Sb (3.5) BS02 ZN ? GO:0000028 ... P35997 36321656
    731734 7wto:Se (3.5) BS01 rna ? GO:0002181 ... P0CX33 36321656
    731735 7wtp:CA (3.8) BS01 rna ? GO:0000056 ... Q99216 36321656
    731736 7wtp:CB (3.8) BS01 rna 2.1.1.309 GO:0000056 ... P25627 36321656
    731737 7wtp:CC (3.8) BS01 rna ? GO:0000461 ... Q07381 36321656
    731738 7wtp:SB (3.8) BS01 rna ? GO:0000462 ... P33442 36321656
    731739 7wtp:SC (3.8) BS01 rna ? GO:0000054 ... P25443 36321656
    731740 7wtp:SE (3.8) BS01 rna ? GO:0002181 ... P0CX35 36321656
    731741 7wtp:SG (3.8) BS01 rna ? GO:0000462 ... P0CX37 36321656
    731742 7wtp:SH (3.8) BS01 rna ? GO:0002181 ... P26786 36321656
    731743 7wtp:SI (3.8) BS01 rna ? GO:0000462 ... P0CX39 36321656
    731744 7wtp:SJ (3.8) BS01 rna ? GO:0000462 ... O13516 36321656
    731745 7wtp:SL (3.8) BS01 rna ? GO:0000028 ... P0CX47 36321656
    731746 7wtp:SN (3.8) BS01 rna ? GO:0000462 ... P05756 36321656
    731747 7wtp:SO (3.8) BS01 rna ? GO:0000028 ... P06367 36321656
    731748 7wtp:SW (3.8) BS01 rna ? GO:0002181 ... P0C0W1 36321656
    731749 7wtp:SX (3.8) BS01 rna ? GO:0000462 ... P0CX29 36321656
    731750 7wtp:SY (3.8) BS01 rna ? GO:0000462 ... P0CX31 36321656
    731751 7wtp:Sb (3.8) BS01 rna ? GO:0000028 ... P35997 36321656
    731752 7wtp:Sb (3.8) BS02 ZN ? GO:0000028 ... P35997 36321656
    731753 7wtp:Se (3.8) BS01 rna ? GO:0002181 ... P0CX33 36321656
    731754 7wtq:CA (3.7) BS01 rna ? GO:0000056 ... Q99216 36321656
    731755 7wtq:CB (3.7) BS01 rna 2.1.1.309 GO:0000056 ... P25627 36321656
    731756 7wtq:CC (3.7) BS01 rna ? GO:0000461 ... Q07381 36321656
    731757 7wtq:SB (3.7) BS01 rna ? GO:0000462 ... P33442 36321656
    731758 7wtq:SE (3.7) BS01 rna ? GO:0002181 ... P0CX35 36321656
    731759 7wtq:SG (3.7) BS01 rna ? GO:0000462 ... P0CX37 36321656
    731760 7wtq:SH (3.7) BS01 rna ? GO:0002181 ... P26786 36321656
    731761 7wtq:SI (3.7) BS01 rna ? GO:0000462 ... P0CX39 36321656
    731762 7wtq:SJ (3.7) BS01 rna ? GO:0000462 ... O13516 36321656
    731763 7wtq:SL (3.7) BS01 rna ? GO:0000028 ... P0CX47 36321656
    731764 7wtq:SN (3.7) BS01 rna ? GO:0000462 ... P05756 36321656
    731765 7wtq:SO (3.7) BS01 rna ? GO:0000028 ... P06367 36321656
    731766 7wtq:SW (3.7) BS01 rna ? GO:0002181 ... P0C0W1 36321656
    731767 7wtq:SX (3.7) BS01 rna ? GO:0000462 ... P0CX29 36321656
    731768 7wtq:SY (3.7) BS01 rna ? GO:0000462 ... P0CX31 36321656
    731769 7wtq:Sb (3.7) BS01 rna ? GO:0000028 ... P35997 36321656
    731770 7wtq:Sb (3.7) BS02 ZN ? GO:0000028 ... P35997 36321656
    731771 7wtq:Se (3.7) BS01 rna ? GO:0002181 ... P0CX33 36321656
    731772 7wtr:CA (3.5) BS01 rna ? GO:0000056 ... Q99216 36321656
    731773 7wtr:CB (3.5) BS01 rna 2.1.1.309 GO:0000056 ... P25627 36321656
    731774 7wtr:CC (3.5) BS01 rna ? GO:0000461 ... Q07381 36321656
    731775 7wtr:SB (3.5) BS01 rna ? GO:0000462 ... P33442 36321656
    731776 7wtr:SC (3.5) BS01 rna ? GO:0000054 ... P25443 36321656
    731777 7wtr:SE (3.5) BS01 rna ? GO:0002181 ... P0CX35 36321656
    731778 7wtr:SG (3.5) BS01 rna ? GO:0000462 ... P0CX37 36321656
    731779 7wtr:SH (3.5) BS01 rna ? GO:0002181 ... P26786 36321656
    731780 7wtr:SI (3.5) BS01 rna ? GO:0000462 ... P0CX39 36321656
    731781 7wtr:SJ (3.5) BS01 rna ? GO:0000462 ... O13516 36321656
    731782 7wtr:SL (3.5) BS01 rna ? GO:0000028 ... P0CX47 36321656
    731783 7wtr:SN (3.5) BS01 rna ? GO:0000462 ... P05756 36321656
    731784 7wtr:SO (3.5) BS01 rna ? GO:0000028 ... P06367 36321656
    731785 7wtr:SW (3.5) BS01 rna ? GO:0002181 ... P0C0W1 36321656
    731786 7wtr:SX (3.5) BS01 rna ? GO:0000462 ... P0CX29 36321656
    731787 7wtr:SY (3.5) BS01 rna ? GO:0000462 ... P0CX31 36321656
    731788 7wtr:Sb (3.5) BS01 rna ? GO:0000028 ... P35997 36321656
    731789 7wtr:Sb (3.5) BS02 ZN ? GO:0000028 ... P35997 36321656
    731790 7wtr:Se (3.5) BS01 rna ? GO:0002181 ... P0CX33 36321656
    731791 7wts:3 (3.2) BS01 rna 2.1.1.183 GO:0000154 ... Q9UNQ2 36321656
    731792 7wts:5 (3.2) BS01 rna ? GO:0003723 ... Q9BVJ6 36321656
    731793 7wts:B (3.2) BS01 rna ? GO:0002181 ... P61247 36321656
    731794 7wts:E (3.2) BS01 rna ? GO:0002181 ... P62701 36321656
    731795 7wts:G (3.2) BS01 rna ? GO:0000082 ... P62753 36321656
    731796 7wts:H (3.2) BS01 rna ? GO:0001843 ... P62081 36321656
    731797 7wts:I (3.2) BS01 rna ? GO:0000462 ... P62241 36321656
    731798 7wts:J (3.2) BS01 rna ? GO:0002181 ... P46781 36321656
    731799 7wts:J (3.2) BS02 peptide ? GO:0002181 ... P46781 36321656
    731800 7wts:L (3.2) BS01 rna ? GO:0002181 ... P62280 36321656

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).