SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    733001 7x21:A (2.8) BS01 ALF 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733002 7x21:A (2.8) BS02 MG 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733003 7x21:A (2.8) BS03 CLR 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733004 7x21:B (2.8) BS01 CLR ? GO:0001666 ... P07340 36085139
    733005 7x22:A (3.0) BS01 ALF 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733006 7x22:A (3.0) BS02 MG 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733007 7x22:A (3.0) BS03 CLR 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733008 7x22:B (3.0) BS01 CLR ? GO:0001666 ... P07340 36085139
    733009 7x23:A (3.2) BS01 ACP 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733010 7x24:A (3.4) BS01 CLR 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733011 7x24:A (3.4) BS02 CLR 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733012 7x24:A (3.4) BS03 ALF 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733013 7x24:A (3.4) BS04 MG 7.2.2.13
    7.2.2.19
    GO:0000166 ... P54708 36085139
    733014 7x24:B (3.4) BS01 CLR ? GO:0001666 ... P07340 36085139
    733015 7x2b:A (1.63) BS01 NRQ N/A GO:0006091 ... N/A 36943649
    733016 7x2c:F (3.2) BS01 CLR ? GO:0001588 ... P21728 35676276
    733017 7x2c:F (3.2) BS02 G3C ? GO:0001588 ... P21728 35676276
    733018 7x2c:F (3.2) BS03 G3C ? GO:0001588 ... P21728 35676276
    733019 7x2d:F (3.3) BS01 CLR ? GO:0001588 ... P21728 35676276
    733020 7x2d:F (3.3) BS02 86W ? GO:0001588 ... P21728 35676276
    733021 7x2e:A (1.85) BS01 peptide ? N/A Q9Y6N9 35747925
    733022 7x2f:F (3.0) BS01 G4C ? GO:0001588 ... P21728 35676276
    733023 7x2f:F (3.0) BS02 CLR ? GO:0001588 ... P21728 35676276
    733024 7x2f:F (3.0) BS03 LDP ? GO:0001588 ... P21728 35676276
    733025 7x2l:E (2.4) BS01 FUC ? N/A P0DTC2 36575191
    733026 7x2n:A (1.72) BS01 MAN N/A N/A N/A N/A
    733027 7x2n:A (1.72) BS02 CA N/A N/A N/A N/A
    733028 7x2q:A (3.68) BS01 HEM 1.14.14.60
    1.14.14.65
    GO:0004497 ... A0A0Y0GRS3 N/A
    733029 7x2q:B (3.68) BS01 HEM 1.14.14.60
    1.14.14.65
    GO:0004497 ... A0A0Y0GRS3 N/A
    733030 7x2s:A (1.92) BS01 MAN N/A N/A N/A N/A
    733031 7x2s:A (1.92) BS02 813 N/A N/A N/A N/A
    733032 7x2s:A (1.92) BS03 80W N/A N/A N/A N/A
    733033 7x2s:A (1.92) BS04 CA N/A N/A N/A N/A
    733034 7x2u:A (3.2) BS01 85R ? GO:0006812 ... P48764 N/A
    733035 7x2u:B (3.2) BS01 85R ? GO:0006812 ... P48764 N/A
    733036 7x2x:A (1.58) BS01 MAN N/A N/A N/A N/A
    733037 7x2x:A (1.58) BS02 80N N/A N/A N/A N/A
    733038 7x2x:A (1.58) BS03 CA N/A N/A N/A N/A
    733039 7x2y:A (2.48) BS01 3HB ? GO:0000166 ... A0A076PYH9 35667443
    733040 7x2y:A (2.48) BS02 NAD ? GO:0000166 ... A0A076PYH9 35667443
    733041 7x2y:B (2.48) BS01 3HB ? GO:0000166 ... A0A076PYH9 35667443
    733042 7x2y:B (2.48) BS02 NAD ? GO:0000166 ... A0A076PYH9 35667443
    733043 7x32:A (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733044 7x32:A (1.829) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733045 7x32:A (1.829) BS03 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733046 7x32:B (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733047 7x32:B (1.829) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733048 7x32:B (1.829) BS03 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733049 7x32:C (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733050 7x32:C (1.829) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733051 7x32:C (1.829) BS03 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733052 7x32:D (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733053 7x32:D (1.829) BS02 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733054 7x32:D (1.829) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733055 7x32:E (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733056 7x32:E (1.829) BS02 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733057 7x32:E (1.829) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733058 7x32:E (1.829) BS04 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733059 7x32:F (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733060 7x32:F (1.829) BS02 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733061 7x32:F (1.829) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733062 7x32:G (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733063 7x32:G (1.829) BS02 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733064 7x32:G (1.829) BS03 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733065 7x32:G (1.829) BS04 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733066 7x32:H (1.829) BS01 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733067 7x32:H (1.829) BS02 FMN 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733068 7x32:H (1.829) BS03 BER 1.-.-.-
    1.5.1.34
    GO:0003955 ... P38489 36189746
    733069 7x34:C (3.1) BS01 rna ? N/A P32527 35701497
    733070 7x36:A (1.92) BS01 CA N/A N/A N/A N/A
    733071 7x36:B (1.92) BS01 CA N/A N/A N/A N/A
    733072 7x36:C (1.92) BS01 CA N/A N/A N/A N/A
    733073 7x36:D (1.92) BS01 CA N/A N/A N/A N/A
    733074 7x3j:A (4.2) BS01 ATP ? GO:0000242 ... P17987 37193829
    733075 7x3j:B (4.2) BS01 ATP ? GO:0002199 ... P78371 37193829
    733076 7x3j:D (4.2) BS01 ATP ? GO:0002199 ... P50991 37193829
    733077 7x3j:E (4.2) BS01 ATP ? GO:0003730 ... P48643 37193829
    733078 7x3j:G (4.2) BS01 ATP ? GO:0002199 ... P49368 37193829
    733079 7x3j:H (4.2) BS01 ATP ? GO:0005515 ... Q99832 37193829
    733080 7x3j:Q (4.2) BS01 ATP ? GO:0002199 ... P50990 37193829
    733081 7x3j:Z (4.2) BS01 ATP ? GO:0003723 ... P40227 37193829
    733082 7x3j:a (4.2) BS01 ATP ? GO:0000242 ... P17987 37193829
    733083 7x3j:b (4.2) BS01 ATP ? GO:0002199 ... P78371 37193829
    733084 7x3j:d (4.2) BS01 ATP ? GO:0002199 ... P50991 37193829
    733085 7x3j:e (4.2) BS01 ATP ? GO:0003730 ... P48643 37193829
    733086 7x3j:g (4.2) BS01 ATP ? GO:0002199 ... P49368 37193829
    733087 7x3j:h (4.2) BS01 ATP ? GO:0005515 ... Q99832 37193829
    733088 7x3j:q (4.2) BS01 ATP ? GO:0002199 ... P50990 37193829
    733089 7x3j:z (4.2) BS01 ATP ? GO:0003723 ... P40227 37193829
    733090 7x3l:A (1.86) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733091 7x3l:A (1.86) BS02 8FO 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733092 7x3l:B (1.86) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733093 7x3l:B (1.86) BS02 8FO 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733094 7x3m:A (2.694) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733095 7x3m:A (2.694) BS02 8IH 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733096 7x3m:B (2.694) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733097 7x3m:B (2.694) BS02 8IH 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 37409679
    733098 7x3o:A (2.001) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 N/A
    733099 7x3o:A (2.001) BS02 8IT 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 N/A
    733100 7x3o:B (2.001) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 N/A
    733101 7x3o:B (2.001) BS02 8IT 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 N/A
    733102 7x3p:A (1.56) BS01 8VG 2.3.1.- GO:0036054 ... Q9NXA8 N/A
    733103 7x3p:A (1.56) BS02 ZN 2.3.1.- GO:0036054 ... Q9NXA8 N/A
    733104 7x3t:A (5.4) BS01 dna ? GO:0000786 ... P84233 38177688
    733105 7x3t:A (5.4) BS02 dna ? GO:0000786 ... P84233 38177688
    733106 7x3t:B (5.4) BS01 dna ? GO:0000786 ... P62799 38177688
    733107 7x3t:B (5.4) BS02 dna ? GO:0000786 ... P62799 38177688
    733108 7x3t:C (5.4) BS01 dna ? GO:0000786 ... P06897 38177688
    733109 7x3t:C (5.4) BS02 dna ? GO:0000786 ... P06897 38177688
    733110 7x3t:D (5.4) BS01 dna ? GO:0000786 ... P02281 38177688
    733111 7x3t:D (5.4) BS02 dna ? GO:0000786 ... P02281 38177688
    733112 7x3t:E (5.4) BS01 dna ? GO:0000786 ... P84233 38177688
    733113 7x3t:E (5.4) BS02 dna ? GO:0000786 ... P84233 38177688
    733114 7x3t:F (5.4) BS01 dna ? GO:0000786 ... P62799 38177688
    733115 7x3t:F (5.4) BS02 dna ? GO:0000786 ... P62799 38177688
    733116 7x3t:G (5.4) BS01 dna ? GO:0000786 ... P06897 38177688
    733117 7x3t:G (5.4) BS02 dna ? GO:0000786 ... P06897 38177688
    733118 7x3t:H (5.4) BS01 dna ? GO:0000786 ... P02281 38177688
    733119 7x3t:H (5.4) BS02 dna ? GO:0000786 ... P02281 38177688
    733120 7x3t:K (5.4) BS01 dna ? GO:0000786 ... P84233 38177688
    733121 7x3t:K (5.4) BS02 dna ? GO:0000786 ... P84233 38177688
    733122 7x3t:L (5.4) BS01 dna ? GO:0000786 ... P62799 38177688
    733123 7x3t:L (5.4) BS02 dna ? GO:0000786 ... P62799 38177688
    733124 7x3t:M (5.4) BS01 dna ? GO:0000786 ... P06897 38177688
    733125 7x3t:M (5.4) BS02 dna ? GO:0000786 ... P06897 38177688
    733126 7x3t:N (5.4) BS01 dna ? GO:0000786 ... P02281 38177688
    733127 7x3t:N (5.4) BS02 dna ? GO:0000786 ... P02281 38177688
    733128 7x3t:O (5.4) BS01 dna ? GO:0000786 ... P84233 38177688
    733129 7x3t:O (5.4) BS02 dna ? GO:0000786 ... P84233 38177688
    733130 7x3t:P (5.4) BS01 dna ? GO:0000786 ... P62799 38177688
    733131 7x3t:Q (5.4) BS01 dna ? GO:0000786 ... P06897 38177688
    733132 7x3t:Q (5.4) BS02 dna ? GO:0000786 ... P06897 38177688
    733133 7x3t:R (5.4) BS01 dna ? GO:0000786 ... P02281 38177688
    733134 7x3t:R (5.4) BS02 dna ? GO:0000786 ... P02281 38177688
    733135 7x3t:V (5.4) BS01 dna 3.6.4.- GO:0000182 ... P38144 38177688
    733136 7x3t:V (5.4) BS02 dna 3.6.4.- GO:0000182 ... P38144 38177688
    733137 7x3t:V (5.4) BS03 ADP 3.6.4.- GO:0000182 ... P38144 38177688
    733138 7x3t:V (5.4) BS04 BEF 3.6.4.- GO:0000182 ... P38144 38177688
    733139 7x3t:V (5.4) BS05 MG 3.6.4.- GO:0000182 ... P38144 38177688
    733140 7x3u:A (3.3) BS01 ADP ? GO:0000242 ... P17987 37193829
    733141 7x3u:B (3.3) BS01 ADP ? GO:0002199 ... P78371 37193829
    733142 7x3u:D (3.3) BS01 ADP ? GO:0002199 ... P50991 37193829
    733143 7x3u:E (3.3) BS01 ADP ? GO:0003730 ... P48643 37193829
    733144 7x3u:G (3.3) BS01 ADP ? GO:0002199 ... P49368 37193829
    733145 7x3u:H (3.3) BS01 ADP ? GO:0005515 ... Q99832 37193829
    733146 7x3u:Q (3.3) BS01 ADP ? GO:0002199 ... P50990 37193829
    733147 7x3u:Z (3.3) BS01 ADP ? GO:0003723 ... P40227 37193829
    733148 7x3u:a (3.3) BS01 ADP ? GO:0000242 ... P17987 37193829
    733149 7x3u:b (3.3) BS01 ADP ? GO:0002199 ... P78371 37193829
    733150 7x3u:d (3.3) BS01 ADP ? GO:0002199 ... P50991 37193829
    733151 7x3u:e (3.3) BS01 ADP ? GO:0003730 ... P48643 37193829
    733152 7x3u:g (3.3) BS01 ADP ? GO:0002199 ... P49368 37193829
    733153 7x3u:h (3.3) BS01 ADP ? GO:0005515 ... Q99832 37193829
    733154 7x3u:q (3.3) BS01 ADP ? GO:0002199 ... P50990 37193829
    733155 7x3u:z (3.3) BS01 ADP ? GO:0003723 ... P40227 37193829
    733156 7x3v:A (3.09) BS01 dna ? GO:0000786 ... P84233 38177688
    733157 7x3v:A (3.09) BS02 dna ? GO:0000786 ... P84233 38177688
    733158 7x3v:B (3.09) BS01 dna ? GO:0000786 ... P62799 38177688
    733159 7x3v:B (3.09) BS02 dna ? GO:0000786 ... P62799 38177688
    733160 7x3v:C (3.09) BS01 dna ? GO:0000786 ... P06897 38177688
    733161 7x3v:C (3.09) BS02 dna ? GO:0000786 ... P06897 38177688
    733162 7x3v:D (3.09) BS01 dna ? GO:0000786 ... P02281 38177688
    733163 7x3v:E (3.09) BS01 dna ? GO:0000786 ... P84233 38177688
    733164 7x3v:E (3.09) BS02 dna ? GO:0000786 ... P84233 38177688
    733165 7x3v:F (3.09) BS01 dna ? GO:0000786 ... P62799 38177688
    733166 7x3v:F (3.09) BS02 dna ? GO:0000786 ... P62799 38177688
    733167 7x3v:G (3.09) BS01 dna ? GO:0000786 ... P06897 38177688
    733168 7x3v:G (3.09) BS02 dna ? GO:0000786 ... P06897 38177688
    733169 7x3v:H (3.09) BS01 dna ? GO:0000786 ... P02281 38177688
    733170 7x3v:H (3.09) BS02 dna ? GO:0000786 ... P02281 38177688
    733171 7x3w:A (3.1) BS01 dna ? GO:0000786 ... P84233 38177688
    733172 7x3w:A (3.1) BS02 dna ? GO:0000786 ... P84233 38177688
    733173 7x3w:B (3.1) BS01 dna ? GO:0000786 ... P62799 38177688
    733174 7x3w:B (3.1) BS02 dna ? GO:0000786 ... P62799 38177688
    733175 7x3w:C (3.1) BS01 dna ? GO:0000786 ... P06897 38177688
    733176 7x3w:C (3.1) BS02 dna ? GO:0000786 ... P06897 38177688
    733177 7x3w:D (3.1) BS01 dna ? GO:0000786 ... P02281 38177688
    733178 7x3w:D (3.1) BS02 dna ? GO:0000786 ... P02281 38177688
    733179 7x3w:E (3.1) BS01 dna ? GO:0000786 ... P84233 38177688
    733180 7x3w:E (3.1) BS02 dna ? GO:0000786 ... P84233 38177688
    733181 7x3w:F (3.1) BS01 dna ? GO:0000786 ... P62799 38177688
    733182 7x3w:F (3.1) BS02 dna ? GO:0000786 ... P62799 38177688
    733183 7x3w:G (3.1) BS01 dna ? GO:0000786 ... P06897 38177688
    733184 7x3w:G (3.1) BS02 dna ? GO:0000786 ... P06897 38177688
    733185 7x3w:H (3.1) BS01 dna ? GO:0000786 ... P02281 38177688
    733186 7x3w:H (3.1) BS02 dna ? GO:0000786 ... P02281 38177688
    733187 7x3w:K (3.1) BS01 dna 3.6.4.- GO:0000182 ... P38144 38177688
    733188 7x3w:K (3.1) BS02 dna 3.6.4.- GO:0000182 ... P38144 38177688
    733189 7x3w:K (3.1) BS03 ADP 3.6.4.- GO:0000182 ... P38144 38177688
    733190 7x3w:K (3.1) BS04 BEF 3.6.4.- GO:0000182 ... P38144 38177688
    733191 7x3w:K (3.1) BS05 MG 3.6.4.- GO:0000182 ... P38144 38177688
    733192 7x3x:A (3.2) BS01 dna ? GO:0000786 ... P84233 38177688
    733193 7x3x:A (3.2) BS02 dna ? GO:0000786 ... P84233 38177688
    733194 7x3x:B (3.2) BS01 dna ? GO:0000786 ... P62799 38177688
    733195 7x3x:C (3.2) BS01 dna ? GO:0000786 ... P06897 38177688
    733196 7x3x:C (3.2) BS02 dna ? GO:0000786 ... P06897 38177688
    733197 7x3x:C (3.2) BS03 peptide ? GO:0000786 ... P06897 38177688
    733198 7x3x:D (3.2) BS01 dna ? GO:0000786 ... P02281 38177688
    733199 7x3x:D (3.2) BS02 dna ? GO:0000786 ... P02281 38177688
    733200 7x3x:E (3.2) BS01 dna ? GO:0000786 ... P84233 38177688

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).