SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    737201 7xx5:Q (3.19) BS01 dna ? GO:0000786 ... P04908 N/A
    737202 7xx5:Q (3.19) BS02 dna ? GO:0000786 ... P04908 N/A
    737203 7xx5:R (3.19) BS01 dna ? GO:0000786 ... P06899 N/A
    737204 7xx5:R (3.19) BS02 dna ? GO:0000786 ... P06899 N/A
    737205 7xx5:U (3.19) BS01 dna ? GO:0000122 ... P16402 N/A
    737206 7xx5:U (3.19) BS02 dna ? GO:0000122 ... P16402 N/A
    737207 7xx5:U (3.19) BS03 dna ? GO:0000122 ... P16402 N/A
    737208 7xx6:A (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737209 7xx6:A (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737210 7xx6:B (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737211 7xx6:B (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737212 7xx6:C (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737213 7xx6:C (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737214 7xx6:D (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737215 7xx6:D (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737216 7xx6:E (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737217 7xx6:E (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737218 7xx6:F (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737219 7xx6:F (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737220 7xx6:G (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737221 7xx6:G (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737222 7xx6:H (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737223 7xx6:H (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737224 7xx6:K (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737225 7xx6:K (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737226 7xx6:L (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737227 7xx6:L (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737228 7xx6:M (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737229 7xx6:M (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737230 7xx6:N (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737231 7xx6:N (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737232 7xx6:O (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737233 7xx6:O (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737234 7xx6:O (3.39) BS03 CA ? GO:0000786 ... P68431 N/A
    737235 7xx6:P (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737236 7xx6:P (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737237 7xx6:Q (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737238 7xx6:Q (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737239 7xx6:R (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737240 7xx6:R (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737241 7xx6:U (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737242 7xx6:U (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737243 7xx6:V (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737244 7xx6:V (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737245 7xx6:W (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737246 7xx6:W (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737247 7xx6:X (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737248 7xx6:X (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737249 7xx6:Y (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737250 7xx6:Y (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737251 7xx6:Z (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737252 7xx6:Z (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737253 7xx6:a (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737254 7xx6:a (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737255 7xx6:b (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737256 7xx6:b (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737257 7xx6:e (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737258 7xx6:e (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737259 7xx6:f (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737260 7xx6:f (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737261 7xx6:g (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737262 7xx6:g (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737263 7xx6:h (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737264 7xx6:h (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737265 7xx6:i (3.39) BS01 dna ? GO:0000786 ... P68431 N/A
    737266 7xx6:i (3.39) BS02 dna ? GO:0000786 ... P68431 N/A
    737267 7xx6:j (3.39) BS01 dna ? GO:0000781 ... P62805 N/A
    737268 7xx6:j (3.39) BS02 dna ? GO:0000781 ... P62805 N/A
    737269 7xx6:k (3.39) BS01 dna ? GO:0000786 ... P04908 N/A
    737270 7xx6:k (3.39) BS02 dna ? GO:0000786 ... P04908 N/A
    737271 7xx6:l (3.39) BS01 dna ? GO:0000786 ... P06899 N/A
    737272 7xx6:l (3.39) BS02 dna ? GO:0000786 ... P06899 N/A
    737273 7xx6:o (3.39) BS01 dna ? GO:0000785 ... P07305 N/A
    737274 7xx6:o (3.39) BS02 dna ? GO:0000785 ... P07305 N/A
    737275 7xx6:p (3.39) BS01 dna ? GO:0000785 ... P07305 N/A
    737276 7xx6:p (3.39) BS02 dna ? GO:0000785 ... P07305 N/A
    737277 7xx7:A () BS01 dna N/A N/A N/A N/A
    737278 7xx7:A () BS02 dna N/A N/A N/A N/A
    737279 7xx7:B () BS01 dna N/A N/A N/A N/A
    737280 7xx7:B () BS02 dna N/A N/A N/A N/A
    737281 7xx7:C () BS01 dna N/A N/A N/A N/A
    737282 7xx7:C () BS02 dna N/A N/A N/A N/A
    737283 7xx7:D () BS01 dna N/A N/A N/A N/A
    737284 7xx7:D () BS02 dna N/A N/A N/A N/A
    737285 7xx7:E () BS01 dna N/A N/A N/A N/A
    737286 7xx7:E () BS02 dna N/A N/A N/A N/A
    737287 7xx7:F () BS01 dna N/A N/A N/A N/A
    737288 7xx7:F () BS02 dna N/A N/A N/A N/A
    737289 7xx7:G () BS01 dna N/A N/A N/A N/A
    737290 7xx7:G () BS02 dna N/A N/A N/A N/A
    737291 7xx7:G () BS03 CA N/A N/A N/A N/A
    737292 7xx7:H () BS01 dna N/A N/A N/A N/A
    737293 7xx7:H () BS02 dna N/A N/A N/A N/A
    737294 7xx7:K () BS01 dna N/A N/A N/A N/A
    737295 7xx7:K () BS02 dna N/A N/A N/A N/A
    737296 7xx7:L () BS01 dna N/A N/A N/A N/A
    737297 7xx7:L () BS02 dna N/A N/A N/A N/A
    737298 7xx7:M () BS01 dna N/A N/A N/A N/A
    737299 7xx7:M () BS02 dna N/A N/A N/A N/A
    737300 7xx7:N () BS01 dna N/A N/A N/A N/A
    737301 7xx7:N () BS02 dna N/A N/A N/A N/A
    737302 7xx7:O () BS01 dna N/A N/A N/A N/A
    737303 7xx7:O () BS02 dna N/A N/A N/A N/A
    737304 7xx7:P () BS01 dna N/A N/A N/A N/A
    737305 7xx7:P () BS02 dna N/A N/A N/A N/A
    737306 7xx7:Q () BS01 dna N/A N/A N/A N/A
    737307 7xx7:Q () BS02 dna N/A N/A N/A N/A
    737308 7xx7:Q () BS03 CA N/A N/A N/A N/A
    737309 7xx7:R () BS01 dna N/A N/A N/A N/A
    737310 7xx7:R () BS02 dna N/A N/A N/A N/A
    737311 7xx7:U () BS01 dna N/A N/A N/A N/A
    737312 7xx7:U () BS02 dna N/A N/A N/A N/A
    737313 7xxb:A (2.93) BS01 IAC ? GO:0005739 ... Q9S7Z8 35917926
    737314 7xxb:B (2.93) BS01 IAC ? GO:0005739 ... Q9S7Z8 35917926
    737315 7xxc:A (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737316 7xxc:A (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737317 7xxc:A (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737318 7xxc:B (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737319 7xxc:B (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737320 7xxc:B (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737321 7xxc:C (1.989) BS01 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737322 7xxc:C (1.989) BS02 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737323 7xxc:C (1.989) BS03 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737324 7xxc:C (1.989) BS04 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737325 7xxc:D (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737326 7xxc:D (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737327 7xxc:D (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737328 7xxc:E (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737329 7xxc:E (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737330 7xxc:E (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737331 7xxc:F (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737332 7xxc:F (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737333 7xxc:F (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737334 7xxc:F (1.989) BS04 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737335 7xxc:G (1.989) BS01 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737336 7xxc:G (1.989) BS02 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737337 7xxc:G (1.989) BS03 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737338 7xxc:G (1.989) BS04 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737339 7xxc:H (1.989) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737340 7xxc:H (1.989) BS02 I55 ? GO:0000166 ... A0A125SZC1 37137912
    737341 7xxc:H (1.989) BS03 GLY ? GO:0000166 ... A0A125SZC1 37137912
    737342 7xxd:A (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737343 7xxd:B (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737344 7xxd:C (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737345 7xxd:D (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737346 7xxd:E (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737347 7xxd:F (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737348 7xxd:G (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737349 7xxd:H (1.982) BS01 FAD ? GO:0000166 ... A0A125SZC1 37137912
    737350 7xxf:0 (2.24) BS01 peptide ? GO:0005886 ... A0A2S6NEL9 36344631
    737351 7xxf:0 (2.24) BS02 I7D ? GO:0005886 ... A0A2S6NEL9 36344631
    737352 7xxf:0 (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737353 7xxf:0 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737354 7xxf:0 (2.24) BS05 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737355 7xxf:1 (2.24) BS01 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737356 7xxf:1 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737357 7xxf:1 (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737358 7xxf:1 (2.24) BS04 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737359 7xxf:2 (2.24) BS01 peptide ? GO:0005886 ... A0A2S6NEL9 36344631
    737360 7xxf:2 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737361 7xxf:2 (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737362 7xxf:2 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737363 7xxf:2 (2.24) BS05 I7D ? GO:0005886 ... A0A2S6NEL9 36344631
    737364 7xxf:3 (2.24) BS01 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737365 7xxf:3 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737366 7xxf:3 (2.24) BS03 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737367 7xxf:3 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737368 7xxf:3 (2.24) BS05 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737369 7xxf:4 (2.24) BS01 peptide ? GO:0005886 ... A0A2S6NEL9 36344631
    737370 7xxf:4 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737371 7xxf:4 (2.24) BS03 I7D ? GO:0005886 ... A0A2S6NEL9 36344631
    737372 7xxf:4 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737373 7xxf:5 (2.24) BS01 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737374 7xxf:5 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737375 7xxf:5 (2.24) BS03 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737376 7xxf:5 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737377 7xxf:5 (2.24) BS05 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737378 7xxf:6 (2.24) BS01 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737379 7xxf:6 (2.24) BS02 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737380 7xxf:6 (2.24) BS03 I7D ? GO:0005886 ... A0A2S6NEL9 36344631
    737381 7xxf:6 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737382 7xxf:7 (2.24) BS01 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737383 7xxf:7 (2.24) BS02 U10 ? GO:0005886 ... A0A2S6NEK3 36344631
    737384 7xxf:7 (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737385 7xxf:7 (2.24) BS04 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737386 7xxf:7 (2.24) BS05 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737387 7xxf:8 (2.24) BS01 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737388 7xxf:8 (2.24) BS02 I7D ? GO:0005886 ... A0A2S6NEL9 36344631
    737389 7xxf:8 (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEL9 36344631
    737390 7xxf:9 (2.24) BS01 peptide ? GO:0005886 ... A0A2S6NEK3 36344631
    737391 7xxf:9 (2.24) BS02 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737392 7xxf:9 (2.24) BS03 U10 ? GO:0005886 ... A0A2S6NEK3 36344631
    737393 7xxf:9 (2.24) BS04 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737394 7xxf:9 (2.24) BS05 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737395 7xxf:9 (2.24) BS06 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737396 7xxf:A (2.24) BS01 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737397 7xxf:A (2.24) BS02 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737398 7xxf:A (2.24) BS03 BCL ? GO:0005886 ... A0A2S6NEK3 36344631
    737399 7xxf:A (2.24) BS04 I7D ? GO:0005886 ... A0A2S6NEK3 36344631
    737400 7xxf:B (2.24) BS01 peptide ? GO:0005886 ... A0A2S6NEL9 36344631

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).