SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    751001 7y7c:H (2.51) BS01 rna ? GO:0000028 ... P0A7W7 37992713
    751002 7y7c:I (2.51) BS01 rna ? GO:0000049 ... P0A7X3 37992713
    751003 7y7c:I (2.51) BS02 rna ? GO:0000049 ... P0A7X3 37992713
    751004 7y7c:J (2.51) BS01 rna ? GO:0000049 ... P0A7R5 37992713
    751005 7y7c:K (2.51) BS01 rna ? GO:0002181 ... P0A7R9 37992713
    751006 7y7c:L (2.51) BS01 rna ? GO:0000049 ... P0A7S3 37992713
    751007 7y7c:M (2.51) BS01 rna ? GO:0000049 ... P0A7S9 37992713
    751008 7y7c:M (2.51) BS02 rna ? GO:0000049 ... P0A7S9 37992713
    751009 7y7c:N (2.51) BS01 rna ? GO:0000028 ... P0AG59 37992713
    751010 7y7c:O (2.51) BS01 rna ? GO:0000028 ... P0ADZ4 37992713
    751011 7y7c:O (2.51) BS02 rna ? GO:0000028 ... P0ADZ4 37992713
    751012 7y7c:P (2.51) BS01 rna ? GO:0000028 ... P0A7T3 37992713
    751013 7y7c:Q (2.51) BS01 rna ? GO:0000028 ... P0AG63 37992713
    751014 7y7c:R (2.51) BS01 rna ? GO:0002181 ... P0A7T7 37992713
    751015 7y7c:S (2.51) BS01 rna ? GO:0000028 ... P0A7U3 37992713
    751016 7y7c:T (2.51) BS01 rna ? GO:0000028 ... P0A7U7 37992713
    751017 7y7c:U (2.51) BS01 rna ? GO:0000028 ... P68679 37992713
    751018 7y7c:c (2.51) BS01 rna ? GO:0000027 ... P60422 37992713
    751019 7y7c:d (2.51) BS01 rna ? GO:0000027 ... P60438 37992713
    751020 7y7c:e (2.51) BS01 rna ? GO:0001070 ... P60723 37992713
    751021 7y7c:f (2.51) BS01 rna ? GO:0000027 ... P62399 37992713
    751022 7y7c:f (2.51) BS02 rna ? GO:0000027 ... P62399 37992713
    751023 7y7c:f (2.51) BS03 rna ? GO:0000027 ... P62399 37992713
    751024 7y7c:g (2.51) BS01 rna ? GO:0000027 ... P0AG55 37992713
    751025 7y7c:h (2.51) BS01 rna ? GO:0002181 ... P0A7R1 37992713
    751026 7y7c:i (2.51) BS01 rna ? GO:0002181 ... P0AA10 37992713
    751027 7y7c:j (2.51) BS01 rna ? GO:0002181 ... P0ADY3 37992713
    751028 7y7c:j (2.51) BS02 rna ? GO:0002181 ... P0ADY3 37992713
    751029 7y7c:k (2.51) BS01 rna ? GO:0002181 ... P02413 37992713
    751030 7y7c:l (2.51) BS01 rna ? GO:0000027 ... P0ADY7 37992713
    751031 7y7c:l (2.51) BS02 rna ? GO:0000027 ... P0ADY7 37992713
    751032 7y7c:l (2.51) BS03 rna ? GO:0000027 ... P0ADY7 37992713
    751033 7y7c:m (2.51) BS01 rna ? GO:0000027 ... P0AG44 37992713
    751034 7y7c:n (2.51) BS01 rna ? GO:0002181 ... P0C018 37992713
    751035 7y7c:n (2.51) BS02 rna ? GO:0002181 ... P0C018 37992713
    751036 7y7c:o (2.51) BS01 rna ? GO:0000027 ... P0A7K6 37992713
    751037 7y7c:o (2.51) BS02 rna ? GO:0000027 ... P0A7K6 37992713
    751038 7y7c:p (2.51) BS01 rna ? GO:0000027 ... P0A7L3 37992713
    751039 7y7c:q (2.51) BS01 rna ? GO:0002181 ... P0AG48 37992713
    751040 7y7c:r (2.51) BS01 rna ? GO:0002181 ... P61175 37992713
    751041 7y7c:s (2.51) BS01 rna ? GO:0000027 ... P0ADZ0 37992713
    751042 7y7c:t (2.51) BS01 rna ? GO:0000027 ... P60624 37992713
    751043 7y7c:u (2.51) BS01 rna ? GO:0000027 ... P68919 37992713
    751044 7y7c:v (2.51) BS01 rna ? GO:0000027 ... P0A7L8 37992713
    751045 7y7c:v (2.51) BS02 rna ? GO:0000027 ... P0A7L8 37992713
    751046 7y7c:v (2.51) BS03 rna ? GO:0000027 ... P0A7L8 37992713
    751047 7y7c:w (2.51) BS01 rna ? GO:0000027 ... P0A7M2 37992713
    751048 7y7c:x (2.51) BS01 rna ? GO:0000027 ... P0A7M6 37992713
    751049 7y7c:y (2.51) BS01 rna ? GO:0000027 ... P0AG51 37992713
    751050 7y7c:z (2.51) BS01 rna ? GO:0000027 ... P0A7N4 37992713
    751051 7y7d:0 (2.58) BS01 rna ? GO:0000027 ... P0A7N9 37992713
    751052 7y7d:1 (2.58) BS01 rna ? GO:0002181 ... P0A7P5 37992713
    751053 7y7d:2 (2.58) BS01 rna ? GO:0002181 ... P0A7Q1 37992713
    751054 7y7d:3 (2.58) BS01 rna ? GO:0002181 ... P0A7Q6 37992713
    751055 7y7d:4 (2.58) BS01 rna ? GO:0002181 ... P0A7M9 37992713
    751056 7y7d:B (2.58) BS01 rna ? GO:0000028 ... P0A7V0 37992713
    751057 7y7d:C (2.58) BS01 rna ? GO:0000028 ... P0A7V3 37992713
    751058 7y7d:D (2.58) BS01 rna ? GO:0000028 ... P0A7V8 37992713
    751059 7y7d:E (2.58) BS01 rna ? GO:0000028 ... P0A7W1 37992713
    751060 7y7d:F (2.58) BS01 rna ? GO:0002181 ... P02358 37992713
    751061 7y7d:G (2.58) BS01 rna ? GO:0000028 ... P02359 37992713
    751062 7y7d:H (2.58) BS01 rna ? GO:0000028 ... P0A7W7 37992713
    751063 7y7d:I (2.58) BS01 rna ? GO:0000049 ... P0A7X3 37992713
    751064 7y7d:I (2.58) BS02 rna ? GO:0000049 ... P0A7X3 37992713
    751065 7y7d:J (2.58) BS01 rna ? GO:0000049 ... P0A7R5 37992713
    751066 7y7d:K (2.58) BS01 rna ? GO:0002181 ... P0A7R9 37992713
    751067 7y7d:L (2.58) BS01 rna ? GO:0000049 ... P0A7S3 37992713
    751068 7y7d:M (2.58) BS01 rna ? GO:0000049 ... P0A7S9 37992713
    751069 7y7d:M (2.58) BS02 rna ? GO:0000049 ... P0A7S9 37992713
    751070 7y7d:N (2.58) BS01 rna ? GO:0000028 ... P0AG59 37992713
    751071 7y7d:O (2.58) BS01 rna ? GO:0000028 ... P0ADZ4 37992713
    751072 7y7d:O (2.58) BS02 rna ? GO:0000028 ... P0ADZ4 37992713
    751073 7y7d:P (2.58) BS01 rna ? GO:0000028 ... P0A7T3 37992713
    751074 7y7d:Q (2.58) BS01 rna ? GO:0000028 ... P0AG63 37992713
    751075 7y7d:R (2.58) BS01 rna ? GO:0002181 ... P0A7T7 37992713
    751076 7y7d:S (2.58) BS01 rna ? GO:0000028 ... P0A7U3 37992713
    751077 7y7d:T (2.58) BS01 rna ? GO:0000028 ... P0A7U7 37992713
    751078 7y7d:U (2.58) BS01 rna ? GO:0000028 ... P68679 37992713
    751079 7y7d:c (2.58) BS01 rna ? GO:0000027 ... P60422 37992713
    751080 7y7d:d (2.58) BS01 rna ? GO:0000027 ... P60438 37992713
    751081 7y7d:e (2.58) BS01 rna ? GO:0001070 ... P60723 37992713
    751082 7y7d:f (2.58) BS01 rna ? GO:0000027 ... P62399 37992713
    751083 7y7d:f (2.58) BS02 rna ? GO:0000027 ... P62399 37992713
    751084 7y7d:f (2.58) BS03 rna ? GO:0000027 ... P62399 37992713
    751085 7y7d:g (2.58) BS01 rna ? GO:0000027 ... P0AG55 37992713
    751086 7y7d:h (2.58) BS01 rna ? GO:0002181 ... P0A7R1 37992713
    751087 7y7d:i (2.58) BS01 rna ? GO:0002181 ... P0AA10 37992713
    751088 7y7d:j (2.58) BS01 rna ? GO:0002181 ... P0ADY3 37992713
    751089 7y7d:j (2.58) BS02 rna ? GO:0002181 ... P0ADY3 37992713
    751090 7y7d:k (2.58) BS01 rna ? GO:0002181 ... P02413 37992713
    751091 7y7d:l (2.58) BS01 rna ? GO:0000027 ... P0ADY7 37992713
    751092 7y7d:l (2.58) BS02 rna ? GO:0000027 ... P0ADY7 37992713
    751093 7y7d:l (2.58) BS03 rna ? GO:0000027 ... P0ADY7 37992713
    751094 7y7d:m (2.58) BS01 rna ? GO:0000027 ... P0AG44 37992713
    751095 7y7d:n (2.58) BS01 rna ? GO:0002181 ... P0C018 37992713
    751096 7y7d:n (2.58) BS02 rna ? GO:0002181 ... P0C018 37992713
    751097 7y7d:o (2.58) BS01 rna ? GO:0000027 ... P0A7K6 37992713
    751098 7y7d:o (2.58) BS02 rna ? GO:0000027 ... P0A7K6 37992713
    751099 7y7d:p (2.58) BS01 rna ? GO:0000027 ... P0A7L3 37992713
    751100 7y7d:q (2.58) BS01 rna ? GO:0002181 ... P0AG48 37992713
    751101 7y7d:r (2.58) BS01 rna ? GO:0002181 ... P61175 37992713
    751102 7y7d:s (2.58) BS01 rna ? GO:0000027 ... P0ADZ0 37992713
    751103 7y7d:t (2.58) BS01 rna ? GO:0000027 ... P60624 37992713
    751104 7y7d:u (2.58) BS01 rna ? GO:0000027 ... P68919 37992713
    751105 7y7d:v (2.58) BS01 rna ? GO:0000027 ... P0A7L8 37992713
    751106 7y7d:v (2.58) BS02 rna ? GO:0000027 ... P0A7L8 37992713
    751107 7y7d:w (2.58) BS01 rna ? GO:0000027 ... P0A7M2 37992713
    751108 7y7d:x (2.58) BS01 rna ? GO:0000027 ... P0A7M6 37992713
    751109 7y7d:y (2.58) BS01 rna ? GO:0000027 ... P0AG51 37992713
    751110 7y7d:z (2.58) BS01 rna ? GO:0000027 ... P0A7N4 37992713
    751111 7y7e:0 (2.41) BS01 rna ? GO:0000027 ... P0A7N9 37992713
    751112 7y7e:1 (2.41) BS01 rna ? GO:0002181 ... P0A7P5 37992713
    751113 7y7e:2 (2.41) BS01 rna ? GO:0002181 ... P0A7Q1 37992713
    751114 7y7e:3 (2.41) BS01 rna ? GO:0002181 ... P0A7Q6 37992713
    751115 7y7e:4 (2.41) BS01 rna ? GO:0002181 ... P0A7M9 37992713
    751116 7y7e:B (2.41) BS01 rna ? GO:0000028 ... P0A7V0 37992713
    751117 7y7e:C (2.41) BS01 rna ? GO:0000028 ... P0A7V3 37992713
    751118 7y7e:C (2.41) BS02 rna ? GO:0000028 ... P0A7V3 37992713
    751119 7y7e:D (2.41) BS01 rna ? GO:0000028 ... P0A7V8 37992713
    751120 7y7e:E (2.41) BS01 rna ? GO:0000028 ... P0A7W1 37992713
    751121 7y7e:F (2.41) BS01 rna ? GO:0002181 ... P02358 37992713
    751122 7y7e:G (2.41) BS01 rna ? GO:0000028 ... P02359 37992713
    751123 7y7e:H (2.41) BS01 rna ? GO:0000028 ... P0A7W7 37992713
    751124 7y7e:I (2.41) BS01 rna ? GO:0000049 ... P0A7X3 37992713
    751125 7y7e:I (2.41) BS02 rna ? GO:0000049 ... P0A7X3 37992713
    751126 7y7e:J (2.41) BS01 rna ? GO:0000049 ... P0A7R5 37992713
    751127 7y7e:K (2.41) BS01 rna ? GO:0002181 ... P0A7R9 37992713
    751128 7y7e:L (2.41) BS01 rna ? GO:0000049 ... P0A7S3 37992713
    751129 7y7e:M (2.41) BS01 rna ? GO:0000049 ... P0A7S9 37992713
    751130 7y7e:M (2.41) BS02 rna ? GO:0000049 ... P0A7S9 37992713
    751131 7y7e:N (2.41) BS01 rna ? GO:0000028 ... P0AG59 37992713
    751132 7y7e:O (2.41) BS01 rna ? GO:0000028 ... P0ADZ4 37992713
    751133 7y7e:O (2.41) BS02 rna ? GO:0000028 ... P0ADZ4 37992713
    751134 7y7e:P (2.41) BS01 rna ? GO:0000028 ... P0A7T3 37992713
    751135 7y7e:Q (2.41) BS01 rna ? GO:0000028 ... P0AG63 37992713
    751136 7y7e:R (2.41) BS01 rna ? GO:0002181 ... P0A7T7 37992713
    751137 7y7e:S (2.41) BS01 rna ? GO:0000028 ... P0A7U3 37992713
    751138 7y7e:T (2.41) BS01 rna ? GO:0000028 ... P0A7U7 37992713
    751139 7y7e:U (2.41) BS01 rna ? GO:0000028 ... P68679 37992713
    751140 7y7e:c (2.41) BS01 rna ? GO:0000027 ... P60422 37992713
    751141 7y7e:d (2.41) BS01 rna ? GO:0000027 ... P60438 37992713
    751142 7y7e:e (2.41) BS01 rna ? GO:0001070 ... P60723 37992713
    751143 7y7e:f (2.41) BS01 rna ? GO:0000027 ... P62399 37992713
    751144 7y7e:f (2.41) BS02 rna ? GO:0000027 ... P62399 37992713
    751145 7y7e:f (2.41) BS03 rna ? GO:0000027 ... P62399 37992713
    751146 7y7e:g (2.41) BS01 rna ? GO:0000027 ... P0AG55 37992713
    751147 7y7e:h (2.41) BS01 rna ? GO:0002181 ... P0A7R1 37992713
    751148 7y7e:i (2.41) BS01 rna ? GO:0002181 ... P0AA10 37992713
    751149 7y7e:j (2.41) BS01 rna ? GO:0002181 ... P0ADY3 37992713
    751150 7y7e:j (2.41) BS02 rna ? GO:0002181 ... P0ADY3 37992713
    751151 7y7e:k (2.41) BS01 rna ? GO:0002181 ... P02413 37992713
    751152 7y7e:l (2.41) BS01 rna ? GO:0000027 ... P0ADY7 37992713
    751153 7y7e:l (2.41) BS02 rna ? GO:0000027 ... P0ADY7 37992713
    751154 7y7e:l (2.41) BS03 rna ? GO:0000027 ... P0ADY7 37992713
    751155 7y7e:m (2.41) BS01 rna ? GO:0000027 ... P0AG44 37992713
    751156 7y7e:n (2.41) BS01 rna ? GO:0002181 ... P0C018 37992713
    751157 7y7e:n (2.41) BS02 rna ? GO:0002181 ... P0C018 37992713
    751158 7y7e:o (2.41) BS01 rna ? GO:0000027 ... P0A7K6 37992713
    751159 7y7e:o (2.41) BS02 rna ? GO:0000027 ... P0A7K6 37992713
    751160 7y7e:p (2.41) BS01 rna ? GO:0000027 ... P0A7L3 37992713
    751161 7y7e:q (2.41) BS01 rna ? GO:0002181 ... P0AG48 37992713
    751162 7y7e:r (2.41) BS01 rna ? GO:0002181 ... P61175 37992713
    751163 7y7e:s (2.41) BS01 rna ? GO:0000027 ... P0ADZ0 37992713
    751164 7y7e:t (2.41) BS01 rna ? GO:0000027 ... P60624 37992713
    751165 7y7e:u (2.41) BS01 rna ? GO:0000027 ... P68919 37992713
    751166 7y7e:v (2.41) BS01 rna ? GO:0000027 ... P0A7L8 37992713
    751167 7y7e:v (2.41) BS02 rna ? GO:0000027 ... P0A7L8 37992713
    751168 7y7e:v (2.41) BS03 rna ? GO:0000027 ... P0A7L8 37992713
    751169 7y7e:w (2.41) BS01 rna ? GO:0000027 ... P0A7M2 37992713
    751170 7y7e:x (2.41) BS01 rna ? GO:0000027 ... P0A7M6 37992713
    751171 7y7e:y (2.41) BS01 rna ? GO:0000027 ... P0AG51 37992713
    751172 7y7e:z (2.41) BS01 rna ? GO:0000027 ... P0A7N4 37992713
    751173 7y7f:0 (2.43) BS01 rna ? GO:0000027 ... P0A7N9 37992713
    751174 7y7f:1 (2.43) BS01 rna ? GO:0002181 ... P0A7P5 37992713
    751175 7y7f:2 (2.43) BS01 rna ? GO:0002181 ... P0A7Q1 37992713
    751176 7y7f:3 (2.43) BS01 rna ? GO:0002181 ... P0A7Q6 37992713
    751177 7y7f:4 (2.43) BS01 rna ? GO:0002181 ... P0A7M9 37992713
    751178 7y7f:4 (2.43) BS02 rna ? GO:0002181 ... P0A7M9 37992713
    751179 7y7f:B (2.43) BS01 rna ? GO:0000028 ... P0A7V0 37992713
    751180 7y7f:C (2.43) BS01 rna ? GO:0000028 ... P0A7V3 37992713
    751181 7y7f:C (2.43) BS02 rna ? GO:0000028 ... P0A7V3 37992713
    751182 7y7f:D (2.43) BS01 rna ? GO:0000028 ... P0A7V8 37992713
    751183 7y7f:E (2.43) BS01 rna ? GO:0000028 ... P0A7W1 37992713
    751184 7y7f:F (2.43) BS01 rna ? GO:0002181 ... P02358 37992713
    751185 7y7f:G (2.43) BS01 rna ? GO:0000028 ... P02359 37992713
    751186 7y7f:G (2.43) BS02 rna ? GO:0000028 ... P02359 37992713
    751187 7y7f:H (2.43) BS01 rna ? GO:0000028 ... P0A7W7 37992713
    751188 7y7f:I (2.43) BS01 rna ? GO:0000049 ... P0A7X3 37992713
    751189 7y7f:I (2.43) BS02 rna ? GO:0000049 ... P0A7X3 37992713
    751190 7y7f:J (2.43) BS01 rna ? GO:0000049 ... P0A7R5 37992713
    751191 7y7f:K (2.43) BS01 rna ? GO:0002181 ... P0A7R9 37992713
    751192 7y7f:L (2.43) BS01 rna ? GO:0000049 ... P0A7S3 37992713
    751193 7y7f:M (2.43) BS01 rna ? GO:0000049 ... P0A7S9 37992713
    751194 7y7f:M (2.43) BS02 rna ? GO:0000049 ... P0A7S9 37992713
    751195 7y7f:N (2.43) BS01 rna ? GO:0000028 ... P0AG59 37992713
    751196 7y7f:O (2.43) BS01 rna ? GO:0000028 ... P0ADZ4 37992713
    751197 7y7f:O (2.43) BS02 rna ? GO:0000028 ... P0ADZ4 37992713
    751198 7y7f:P (2.43) BS01 rna ? GO:0000028 ... P0A7T3 37992713
    751199 7y7f:Q (2.43) BS01 rna ? GO:0000028 ... P0AG63 37992713
    751200 7y7f:R (2.43) BS01 rna ? GO:0002181 ... P0A7T7 37992713

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).