SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    751401 7y7r:A (2.1) BS02 rna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751402 7y7r:A (2.1) BS03 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751403 7y7r:A (2.1) BS04 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751404 7y7r:A (2.1) BS05 GTP 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751405 7y7r:B (2.1) BS01 dna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751406 7y7r:B (2.1) BS02 rna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751407 7y7r:B (2.1) BS03 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751408 7y7r:B (2.1) BS04 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751409 7y7r:B (2.1) BS05 GTP 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751410 7y7s:A (2.7) BS01 dna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751411 7y7s:A (2.7) BS02 rna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751412 7y7s:A (2.7) BS03 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751413 7y7s:A (2.7) BS04 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751414 7y7s:A (2.7) BS05 ZAN 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751415 7y7s:B (2.7) BS01 dna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751416 7y7s:B (2.7) BS02 rna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751417 7y7s:B (2.7) BS03 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751418 7y7s:B (2.7) BS04 CA 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751419 7y7s:B (2.7) BS05 ZAN 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751420 7y7t:A (2.5) BS01 dna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751421 7y7t:A (2.5) BS02 rna 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751422 7y7t:A (2.5) BS03 GTP 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751423 7y7t:A (2.5) BS04 MG 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751424 7y7t:A (2.5) BS05 MG 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751425 7y7t:B (2.5) BS01 MG 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751426 7y7t:B (2.5) BS02 MG 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751427 7y7t:B (2.5) BS03 ATP 2.7.7.48 GO:0003968 ... Q9Y7G6 36039765
    751428 7y7u:A (1.89) BS01 ZN ? GO:0016787 ... A0A222F232 36071959
    751429 7y7u:A (1.89) BS02 ZN ? GO:0016787 ... A0A222F232 36071959
    751430 7y7u:B (1.89) BS01 ZN ? GO:0016787 ... A0A222F232 36071959
    751431 7y7u:B (1.89) BS02 ZN ? GO:0016787 ... A0A222F232 36071959
    751432 7y7w:A (2.4) BS01 ABU ? GO:0005332 ... P30531 37400655
    751433 7y7w:A (2.4) BS02 NA ? GO:0005332 ... P30531 37400655
    751434 7y7w:A (2.4) BS03 NA ? GO:0005332 ... P30531 37400655
    751435 7y7y:A (2.4) BS01 ID7 ? GO:0005332 ... P30531 37400655
    751436 7y7y:A (2.4) BS02 NA ? GO:0005332 ... P30531 37400655
    751437 7y7y:A (2.4) BS03 NA ? GO:0005332 ... P30531 37400655
    751438 7y7z:A (3.2) BS01 TGI ? GO:0005332 ... P30531 37400655
    751439 7y80:A (2.71) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751440 7y80:A (2.71) BS02 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751441 7y80:A (2.71) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751442 7y80:A (2.71) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751443 7y80:A (2.71) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751444 7y80:A (2.71) BS06 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751445 7y81:A (2.54) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751446 7y81:A (2.54) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751447 7y81:A (2.54) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751448 7y81:A (2.54) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751449 7y81:A (2.54) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751450 7y81:A (2.54) BS06 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751451 7y81:A (2.54) BS07 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751452 7y82:A (2.83) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751453 7y82:A (2.83) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751454 7y82:A (2.83) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751455 7y82:A (2.83) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751456 7y82:A (2.83) BS05 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751457 7y82:A (2.83) BS06 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751458 7y83:A (2.93) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751459 7y83:A (2.93) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751460 7y83:A (2.93) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751461 7y83:A (2.93) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751462 7y83:A (2.93) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751463 7y83:A (2.93) BS06 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751464 7y83:A (2.93) BS07 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751465 7y83:D (2.93) BS01 rna ? N/A A0A0B0EKL4 36477448
    751466 7y84:A (2.61) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751467 7y84:A (2.61) BS02 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751468 7y84:A (2.61) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751469 7y84:A (2.61) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751470 7y84:A (2.61) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751471 7y84:A (2.61) BS06 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751472 7y85:A (2.73) BS01 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751473 7y85:A (2.73) BS02 rna ? GO:0051607 ... A0A0B0EGF3 36477448
    751474 7y85:A (2.73) BS03 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751475 7y85:A (2.73) BS04 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751476 7y85:A (2.73) BS05 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751477 7y85:A (2.73) BS06 MG ? GO:0051607 ... A0A0B0EGF3 36477448
    751478 7y85:A (2.73) BS07 ZN ? GO:0051607 ... A0A0B0EGF3 36477448
    751479 7y85:D (2.73) BS01 rna ? N/A A0A0B0EKL4 36477448
    751480 7y88:A (1.87) BS01 GRG ? GO:0010333 ... F8JK18 35819825
    751481 7y88:A (1.87) BS02 MG ? GO:0010333 ... F8JK18 35819825
    751482 7y8a:1 (2.71) BS01 CLA N/A GO:0009765 ... N/A 36943796
    751483 7y8a:1 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751484 7y8a:1 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751485 7y8a:1 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751486 7y8a:1 (2.71) BS05 CLA N/A GO:0009765 ... N/A 36943796
    751487 7y8a:1 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751488 7y8a:1 (2.71) BS07 CLA N/A GO:0009765 ... N/A 36943796
    751489 7y8a:1 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751490 7y8a:1 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751491 7y8a:1 (2.71) BS10 KC2 N/A GO:0009765 ... N/A 36943796
    751492 7y8a:1 (2.71) BS11 CLA N/A GO:0009765 ... N/A 36943796
    751493 7y8a:1 (2.71) BS12 CLA N/A GO:0009765 ... N/A 36943796
    751494 7y8a:1 (2.71) BS13 CLA N/A GO:0009765 ... N/A 36943796
    751495 7y8a:1 (2.71) BS14 II0 N/A GO:0009765 ... N/A 36943796
    751496 7y8a:1 (2.71) BS15 II3 N/A GO:0009765 ... N/A 36943796
    751497 7y8a:1 (2.71) BS16 II0 N/A GO:0009765 ... N/A 36943796
    751498 7y8a:1 (2.71) BS17 II0 N/A GO:0009765 ... N/A 36943796
    751499 7y8a:1 (2.71) BS18 IHT N/A GO:0009765 ... N/A 36943796
    751500 7y8a:1 (2.71) BS19 II0 N/A GO:0009765 ... N/A 36943796
    751501 7y8a:2 (2.71) BS01 II0 N/A GO:0009765 ... N/A 36943796
    751502 7y8a:2 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751503 7y8a:2 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751504 7y8a:2 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751505 7y8a:2 (2.71) BS05 CLA N/A GO:0009765 ... N/A 36943796
    751506 7y8a:2 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751507 7y8a:2 (2.71) BS07 CLA N/A GO:0009765 ... N/A 36943796
    751508 7y8a:2 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751509 7y8a:2 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751510 7y8a:2 (2.71) BS10 CLA N/A GO:0009765 ... N/A 36943796
    751511 7y8a:2 (2.71) BS11 CLA N/A GO:0009765 ... N/A 36943796
    751512 7y8a:2 (2.71) BS12 CLA N/A GO:0009765 ... N/A 36943796
    751513 7y8a:2 (2.71) BS13 II0 N/A GO:0009765 ... N/A 36943796
    751514 7y8a:2 (2.71) BS14 II0 N/A GO:0009765 ... N/A 36943796
    751515 7y8a:2 (2.71) BS15 II0 N/A GO:0009765 ... N/A 36943796
    751516 7y8a:2 (2.71) BS16 IHT N/A GO:0009765 ... N/A 36943796
    751517 7y8a:2 (2.71) BS17 II0 N/A GO:0009765 ... N/A 36943796
    751518 7y8a:2 (2.71) BS18 II0 N/A GO:0009765 ... N/A 36943796
    751519 7y8a:3 (2.71) BS01 CLA N/A GO:0009765 ... N/A 36943796
    751520 7y8a:3 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751521 7y8a:3 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751522 7y8a:3 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751523 7y8a:3 (2.71) BS05 CLA N/A GO:0009765 ... N/A 36943796
    751524 7y8a:3 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751525 7y8a:3 (2.71) BS07 KC2 N/A GO:0009765 ... N/A 36943796
    751526 7y8a:3 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751527 7y8a:3 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751528 7y8a:3 (2.71) BS10 CLA N/A GO:0009765 ... N/A 36943796
    751529 7y8a:3 (2.71) BS11 CLA N/A GO:0009765 ... N/A 36943796
    751530 7y8a:3 (2.71) BS12 CLA N/A GO:0009765 ... N/A 36943796
    751531 7y8a:3 (2.71) BS13 II0 N/A GO:0009765 ... N/A 36943796
    751532 7y8a:3 (2.71) BS14 II0 N/A GO:0009765 ... N/A 36943796
    751533 7y8a:3 (2.71) BS15 II0 N/A GO:0009765 ... N/A 36943796
    751534 7y8a:3 (2.71) BS16 II0 N/A GO:0009765 ... N/A 36943796
    751535 7y8a:3 (2.71) BS17 II0 N/A GO:0009765 ... N/A 36943796
    751536 7y8a:3 (2.71) BS18 CLA N/A GO:0009765 ... N/A 36943796
    751537 7y8a:3 (2.71) BS19 CLA N/A GO:0009765 ... N/A 36943796
    751538 7y8a:3 (2.71) BS20 CLA N/A GO:0009765 ... N/A 36943796
    751539 7y8a:4 (2.71) BS01 CLA N/A GO:0009765 ... N/A 36943796
    751540 7y8a:4 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751541 7y8a:4 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751542 7y8a:4 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751543 7y8a:4 (2.71) BS05 KC2 N/A GO:0009765 ... N/A 36943796
    751544 7y8a:4 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751545 7y8a:4 (2.71) BS07 CLA N/A GO:0009765 ... N/A 36943796
    751546 7y8a:4 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751547 7y8a:4 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751548 7y8a:4 (2.71) BS10 CLA N/A GO:0009765 ... N/A 36943796
    751549 7y8a:4 (2.71) BS11 CLA N/A GO:0009765 ... N/A 36943796
    751550 7y8a:4 (2.71) BS12 II0 N/A GO:0009765 ... N/A 36943796
    751551 7y8a:4 (2.71) BS13 II0 N/A GO:0009765 ... N/A 36943796
    751552 7y8a:4 (2.71) BS14 II0 N/A GO:0009765 ... N/A 36943796
    751553 7y8a:4 (2.71) BS15 II0 N/A GO:0009765 ... N/A 36943796
    751554 7y8a:4 (2.71) BS16 8CT N/A GO:0009765 ... N/A 36943796
    751555 7y8a:4 (2.71) BS17 CLA N/A GO:0009765 ... N/A 36943796
    751556 7y8a:4 (2.71) BS18 CLA N/A GO:0009765 ... N/A 36943796
    751557 7y8a:5 (2.71) BS01 CLA N/A GO:0009765 ... N/A 36943796
    751558 7y8a:5 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751559 7y8a:5 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751560 7y8a:5 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751561 7y8a:5 (2.71) BS05 CLA N/A GO:0009765 ... N/A 36943796
    751562 7y8a:5 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751563 7y8a:5 (2.71) BS07 CLA N/A GO:0009765 ... N/A 36943796
    751564 7y8a:5 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751565 7y8a:5 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751566 7y8a:5 (2.71) BS10 KC2 N/A GO:0009765 ... N/A 36943796
    751567 7y8a:5 (2.71) BS11 CLA N/A GO:0009765 ... N/A 36943796
    751568 7y8a:5 (2.71) BS12 CLA N/A GO:0009765 ... N/A 36943796
    751569 7y8a:5 (2.71) BS13 CLA N/A GO:0009765 ... N/A 36943796
    751570 7y8a:5 (2.71) BS14 II0 N/A GO:0009765 ... N/A 36943796
    751571 7y8a:5 (2.71) BS15 II0 N/A GO:0009765 ... N/A 36943796
    751572 7y8a:5 (2.71) BS16 II0 N/A GO:0009765 ... N/A 36943796
    751573 7y8a:5 (2.71) BS17 II0 N/A GO:0009765 ... N/A 36943796
    751574 7y8a:5 (2.71) BS18 IHT N/A GO:0009765 ... N/A 36943796
    751575 7y8a:5 (2.71) BS19 II0 N/A GO:0009765 ... N/A 36943796
    751576 7y8a:5 (2.71) BS20 CLA N/A GO:0009765 ... N/A 36943796
    751577 7y8a:5 (2.71) BS21 CLA N/A GO:0009765 ... N/A 36943796
    751578 7y8a:6 (2.71) BS01 II0 N/A GO:0009765 ... N/A 36943796
    751579 7y8a:6 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751580 7y8a:6 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751581 7y8a:6 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796
    751582 7y8a:6 (2.71) BS05 CLA N/A GO:0009765 ... N/A 36943796
    751583 7y8a:6 (2.71) BS06 CLA N/A GO:0009765 ... N/A 36943796
    751584 7y8a:6 (2.71) BS07 CLA N/A GO:0009765 ... N/A 36943796
    751585 7y8a:6 (2.71) BS08 CLA N/A GO:0009765 ... N/A 36943796
    751586 7y8a:6 (2.71) BS09 CLA N/A GO:0009765 ... N/A 36943796
    751587 7y8a:6 (2.71) BS10 CLA N/A GO:0009765 ... N/A 36943796
    751588 7y8a:6 (2.71) BS11 KC2 N/A GO:0009765 ... N/A 36943796
    751589 7y8a:6 (2.71) BS12 CLA N/A GO:0009765 ... N/A 36943796
    751590 7y8a:6 (2.71) BS13 CLA N/A GO:0009765 ... N/A 36943796
    751591 7y8a:6 (2.71) BS14 KC2 N/A GO:0009765 ... N/A 36943796
    751592 7y8a:6 (2.71) BS15 II0 N/A GO:0009765 ... N/A 36943796
    751593 7y8a:6 (2.71) BS16 II0 N/A GO:0009765 ... N/A 36943796
    751594 7y8a:6 (2.71) BS17 IHT N/A GO:0009765 ... N/A 36943796
    751595 7y8a:6 (2.71) BS18 II0 N/A GO:0009765 ... N/A 36943796
    751596 7y8a:6 (2.71) BS19 8CT N/A GO:0009765 ... N/A 36943796
    751597 7y8a:7 (2.71) BS01 II0 N/A GO:0009765 ... N/A 36943796
    751598 7y8a:7 (2.71) BS02 CLA N/A GO:0009765 ... N/A 36943796
    751599 7y8a:7 (2.71) BS03 CLA N/A GO:0009765 ... N/A 36943796
    751600 7y8a:7 (2.71) BS04 CLA N/A GO:0009765 ... N/A 36943796

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).