SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3757 3758 3759 3760 3761 3762 3763 3764 3765 3766 3767 3768 3769 3770 3771 3772 3773 3774 3775 3776 3777 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    753201 7yhs:C (3.37) BS02 dna N/A N/A N/A 36209819
    753202 7yhs:D (3.37) BS01 rna N/A N/A N/A 36209819
    753203 7yhs:E (3.37) BS01 rna ? N/A B3G161 36209819
    753204 7yhs:E (3.37) BS02 dna ? N/A B3G161 36209819
    753205 7yhs:F (3.37) BS01 rna N/A N/A N/A 36209819
    753206 7yhs:F (3.37) BS02 dna N/A N/A N/A 36209819
    753207 7yhs:G (3.37) BS01 rna N/A N/A N/A 36209819
    753208 7yhs:G (3.37) BS02 dna N/A N/A N/A 36209819
    753209 7yhs:H (3.37) BS01 rna N/A N/A N/A 36209819
    753210 7yhs:H (3.37) BS02 dna N/A N/A N/A 36209819
    753211 7yhs:I (3.37) BS01 rna N/A N/A N/A 36209819
    753212 7yhs:I (3.37) BS02 dna N/A N/A N/A 36209819
    753213 7yhs:L (3.37) BS01 rna N/A GO:0004519 ... N/A 36209819
    753214 7yhw:A (3.09) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37479708
    753215 7yi0:B (3.2) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37468628
    753216 7yi0:D (3.2) BS01 ZN ? GO:0000118 ... Q04779 37468628
    753217 7yi0:D (3.2) BS02 ZN ? GO:0000118 ... Q04779 37468628
    753218 7yi0:D (3.2) BS03 ZN ? GO:0000118 ... Q04779 37468628
    753219 7yi0:D (3.2) BS04 ZN ? GO:0000118 ... Q04779 37468628
    753220 7yi0:F (3.2) BS01 ZN ? GO:0000118 ... Q04779 37468628
    753221 7yi1:A (2.8) BS01 dna ? GO:0000786 ... P84233 37468628
    753222 7yi1:A (2.8) BS02 dna ? GO:0000786 ... P84233 37468628
    753223 7yi1:B (2.8) BS01 dna ? GO:0000786 ... P62799 37468628
    753224 7yi1:B (2.8) BS02 dna ? GO:0000786 ... P62799 37468628
    753225 7yi1:C (2.8) BS01 dna ? GO:0000786 ... P06897 37468628
    753226 7yi1:C (2.8) BS02 dna ? GO:0000786 ... P06897 37468628
    753227 7yi1:D (2.8) BS01 dna ? GO:0000786 ... P02281 37468628
    753228 7yi1:D (2.8) BS02 dna ? GO:0000786 ... P02281 37468628
    753229 7yi1:E (2.8) BS01 dna ? GO:0000786 ... P84233 37468628
    753230 7yi1:E (2.8) BS02 dna ? GO:0000786 ... P84233 37468628
    753231 7yi1:F (2.8) BS01 dna ? GO:0000786 ... P62799 37468628
    753232 7yi1:F (2.8) BS02 dna ? GO:0000786 ... P62799 37468628
    753233 7yi1:G (2.8) BS01 dna ? GO:0000786 ... P06897 37468628
    753234 7yi1:G (2.8) BS02 dna ? GO:0000786 ... P06897 37468628
    753235 7yi1:H (2.8) BS01 dna ? GO:0000786 ... P02281 37468628
    753236 7yi1:H (2.8) BS02 dna ? GO:0000786 ... P02281 37468628
    753237 7yi1:K (2.8) BS01 dna ? GO:0000122 ... Q12432 37468628
    753238 7yi1:L (2.8) BS01 dna ? GO:0000122 ... Q12432 37468628
    753239 7yi2:A (3.4) BS01 dna ? GO:0000086 ... P22579 37468628
    753240 7yi2:B (3.4) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37468628
    753241 7yi2:D (3.4) BS01 peptide ? GO:0000118 ... Q04779 37468628
    753242 7yi2:D (3.4) BS02 ZN ? GO:0000118 ... Q04779 37468628
    753243 7yi2:D (3.4) BS03 ZN ? GO:0000118 ... Q04779 37468628
    753244 7yi2:D (3.4) BS04 ZN ? GO:0000118 ... Q04779 37468628
    753245 7yi2:D (3.4) BS05 ZN ? GO:0000118 ... Q04779 37468628
    753246 7yi3:B (3.3) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37468628
    753247 7yi3:D (3.3) BS01 peptide ? GO:0000118 ... Q04779 37468628
    753248 7yi3:D (3.3) BS02 ZN ? GO:0000118 ... Q04779 37468628
    753249 7yi3:D (3.3) BS03 ZN ? GO:0000118 ... Q04779 37468628
    753250 7yi3:D (3.3) BS04 ZN ? GO:0000118 ... Q04779 37468628
    753251 7yi3:D (3.3) BS05 ZN ? GO:0000118 ... Q04779 37468628
    753252 7yi4:B (3.96) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37468628
    753253 7yi4:C (3.96) BS01 dna ? GO:0000122 ... Q12432 37468628
    753254 7yi4:D (3.96) BS01 peptide ? GO:0000118 ... Q04779 37468628
    753255 7yi4:D (3.96) BS02 ZN ? GO:0000118 ... Q04779 37468628
    753256 7yi4:D (3.96) BS03 ZN ? GO:0000118 ... Q04779 37468628
    753257 7yi4:D (3.96) BS04 ZN ? GO:0000118 ... Q04779 37468628
    753258 7yi4:D (3.96) BS05 ZN ? GO:0000118 ... Q04779 37468628
    753259 7yi4:E (3.96) BS01 dna ? GO:0000122 ... Q12432 37468628
    753260 7yi4:G (3.96) BS01 dna ? GO:0000786 ... P84233 37468628
    753261 7yi4:G (3.96) BS02 dna ? GO:0000786 ... P84233 37468628
    753262 7yi4:H (3.96) BS01 dna ? GO:0000786 ... P62799 37468628
    753263 7yi4:H (3.96) BS02 dna ? GO:0000786 ... P62799 37468628
    753264 7yi4:I (3.96) BS01 dna ? GO:0000786 ... P06897 37468628
    753265 7yi4:I (3.96) BS02 dna ? GO:0000786 ... P06897 37468628
    753266 7yi4:J (3.96) BS01 dna ? GO:0000786 ... P02281 37468628
    753267 7yi4:J (3.96) BS02 dna ? GO:0000786 ... P02281 37468628
    753268 7yi4:K (3.96) BS01 dna ? GO:0000786 ... P84233 37468628
    753269 7yi4:K (3.96) BS02 dna ? GO:0000786 ... P84233 37468628
    753270 7yi4:L (3.96) BS01 dna ? GO:0000786 ... P62799 37468628
    753271 7yi4:L (3.96) BS02 dna ? GO:0000786 ... P62799 37468628
    753272 7yi4:M (3.96) BS01 dna ? GO:0000786 ... P06897 37468628
    753273 7yi4:M (3.96) BS02 dna ? GO:0000786 ... P06897 37468628
    753274 7yi4:N (3.96) BS01 dna ? GO:0000786 ... P02281 37468628
    753275 7yi4:N (3.96) BS02 dna ? GO:0000786 ... P02281 37468628
    753276 7yi5:A (3.96) BS01 dna ? GO:0000086 ... P22579 37468628
    753277 7yi5:A (3.96) BS02 dna ? GO:0000086 ... P22579 37468628
    753278 7yi5:B (3.96) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37468628
    753279 7yi5:C (3.96) BS01 dna ? GO:0000122 ... Q12432 37468628
    753280 7yi5:D (3.96) BS01 peptide ? GO:0000118 ... Q04779 37468628
    753281 7yi5:D (3.96) BS02 ZN ? GO:0000118 ... Q04779 37468628
    753282 7yi5:D (3.96) BS03 ZN ? GO:0000118 ... Q04779 37468628
    753283 7yi5:D (3.96) BS04 ZN ? GO:0000118 ... Q04779 37468628
    753284 7yi5:D (3.96) BS05 ZN ? GO:0000118 ... Q04779 37468628
    753285 7yi5:E (3.96) BS01 dna ? GO:0000122 ... Q12432 37468628
    753286 7yi5:G (3.96) BS01 dna ? GO:0000786 ... P84233 37468628
    753287 7yi5:G (3.96) BS02 dna ? GO:0000786 ... P84233 37468628
    753288 7yi5:H (3.96) BS01 dna ? GO:0000786 ... P62799 37468628
    753289 7yi5:H (3.96) BS02 dna ? GO:0000786 ... P62799 37468628
    753290 7yi5:I (3.96) BS01 dna ? GO:0000786 ... P06897 37468628
    753291 7yi5:I (3.96) BS02 dna ? GO:0000786 ... P06897 37468628
    753292 7yi5:J (3.96) BS01 dna ? GO:0000786 ... P02281 37468628
    753293 7yi5:J (3.96) BS02 dna ? GO:0000786 ... P02281 37468628
    753294 7yi5:K (3.96) BS01 dna ? GO:0000786 ... P84233 37468628
    753295 7yi5:K (3.96) BS02 dna ? GO:0000786 ... P84233 37468628
    753296 7yi5:L (3.96) BS01 dna ? GO:0000786 ... P62799 37468628
    753297 7yi5:L (3.96) BS02 dna ? GO:0000786 ... P62799 37468628
    753298 7yi5:M (3.96) BS01 dna ? GO:0000786 ... P06897 37468628
    753299 7yi5:M (3.96) BS02 dna ? GO:0000786 ... P06897 37468628
    753300 7yi5:N (3.96) BS01 dna ? GO:0000786 ... P02281 37468628
    753301 7yi5:N (3.96) BS02 dna ? GO:0000786 ... P02281 37468628
    753302 7yi6:B (2.28) BS01 peptide N/A N/A N/A N/A
    753303 7yi6:D (2.28) BS01 peptide N/A N/A N/A N/A
    753304 7yi6:E (2.28) BS01 peptide N/A N/A N/A N/A
    753305 7yi6:F (2.28) BS01 peptide N/A N/A N/A N/A
    753306 7yi7:A (2.8) BS01 IUV 3.2.1.166 GO:0016020 ... Q9Y251 36368497
    753307 7yi7:B (2.8) BS01 IUV 3.2.1.166 N/A Q9Y251 36368497
    753308 7yi8:B (2.7) BS01 SAH ? N/A Q22GC0 36658132
    753309 7yi9:B (2.6) BS01 SAM ? N/A Q22GC0 36658132
    753310 7yia:A (2.428) BS01 MG 3.1.-.- GO:0000166 ... P0DUD5 36796558
    753311 7yid:A (3.4) BS01 K ? GO:0005216 ... Q8NCM2 36928654
    753312 7yid:B (3.4) BS01 K ? GO:0005216 ... Q8NCM2 36928654
    753313 7yid:C (3.4) BS01 K ? GO:0005216 ... Q8NCM2 36928654
    753314 7yid:D (3.4) BS01 K ? GO:0005216 ... Q8NCM2 36928654
    753315 7yis:A (3.3) BS01 4PT ? N/A Q8WWN8 36674645
    753316 7yit:A (3.3) BS01 IVB ? GO:0004930 ... P41145 36906681
    753317 7yiu:B (2.9) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 37308477
    753318 7yiu:D (2.9) BS01 6CM ? GO:0002903 ... Q8N138 37308477
    753319 7yiv:A (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753320 7yiv:A (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753321 7yiv:A (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753322 7yiv:A (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753323 7yiv:B (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753324 7yiv:B (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753325 7yiv:B (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753326 7yiv:B (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753327 7yiv:C (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753328 7yiv:C (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753329 7yiv:C (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753330 7yiv:C (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753331 7yiv:D (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753332 7yiv:D (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753333 7yiv:D (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753334 7yiv:D (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753335 7yiv:E (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753336 7yiv:E (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753337 7yiv:E (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753338 7yiv:E (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753339 7yiv:F (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753340 7yiv:F (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753341 7yiv:F (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753342 7yiv:F (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753343 7yiv:G (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753344 7yiv:G (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753345 7yiv:G (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753346 7yiv:G (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753347 7yiv:H (3.18) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753348 7yiv:H (3.18) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753349 7yiv:H (3.18) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753350 7yiv:H (3.18) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753351 7yiw:A (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753352 7yiw:A (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753353 7yiw:A (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753354 7yiw:A (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753355 7yiw:B (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753356 7yiw:B (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753357 7yiw:B (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753358 7yiw:B (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753359 7yiw:C (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753360 7yiw:C (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753361 7yiw:C (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753362 7yiw:C (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753363 7yiw:D (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753364 7yiw:D (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753365 7yiw:D (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753366 7yiw:D (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753367 7yiw:E (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753368 7yiw:E (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753369 7yiw:E (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753370 7yiw:E (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753371 7yiw:F (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753372 7yiw:F (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753373 7yiw:F (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753374 7yiw:F (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753375 7yiw:G (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753376 7yiw:G (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753377 7yiw:G (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753378 7yiw:G (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753379 7yiw:H (2.89) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753380 7yiw:H (2.89) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753381 7yiw:H (2.89) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753382 7yiw:H (2.89) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753383 7yix:A (2.96) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753384 7yix:A (2.96) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753385 7yix:A (2.96) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753386 7yix:A (2.96) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753387 7yix:B (2.96) BS01 MG 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753388 7yix:B (2.96) BS02 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753389 7yix:B (2.96) BS03 CA 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753390 7yix:B (2.96) BS04 ZN 3.1.3.1
    3.9.1.1
    GO:0001501 ... P05186 37422472
    753391 7yiy:A (2.7) BS01 PLP 2.3.1.50 GO:0009058 ... O15269 37308477
    753392 7yiy:B (2.7) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 37308477
    753393 7yiy:D (2.7) BS01 Z1T ? GO:0002903 ... Q8N138 37308477
    753394 7yj0:A (2.43) BS01 FAD N/A GO:0016491 ... N/A 37301868
    753395 7yj0:B (2.43) BS01 FAD N/A GO:0016491 ... N/A 37301868
    753396 7yj0:C (2.43) BS01 FAD N/A GO:0016491 ... N/A 37301868
    753397 7yj0:D (2.43) BS01 FAD N/A GO:0016491 ... N/A 37301868
    753398 7yj1:B (3.1) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 37308477
    753399 7yj2:A (2.9) BS01 PLP 2.3.1.50 GO:0009058 ... O15269 37308477
    753400 7yj2:B (2.9) BS01 PLP 2.3.1.50 GO:0004758 ... O15270 37308477

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).