SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3759 3760 3761 3762 3763 3764 3765 3766 3767 3768 3769 3770 3771 3772 3773 3774 3775 3776 3777 3778 3779 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    753601 7ykz:B (4.3) BS02 ATP 3.6.4.10 GO:0005515 ... P32794 36351914
    753602 7ykz:B (4.3) BS03 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753603 7ykz:C (4.3) BS01 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753604 7ykz:C (4.3) BS02 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753605 7ykz:C (4.3) BS03 ADP 3.6.4.10 GO:0005515 ... P32794 36351914
    753606 7ykz:C (4.3) BS04 ATP 3.6.4.10 GO:0005515 ... P32794 36351914
    753607 7ykz:D (4.3) BS01 ADP 3.6.4.10 GO:0005515 ... P32794 36351914
    753608 7ykz:D (4.3) BS02 ATP 3.6.4.10 GO:0005515 ... P32794 36351914
    753609 7ykz:D (4.3) BS03 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753610 7ykz:D (4.3) BS04 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753611 7ykz:E (4.3) BS01 ADP 3.6.4.10 GO:0005515 ... P32794 36351914
    753612 7ykz:E (4.3) BS02 ATP 3.6.4.10 GO:0005515 ... P32794 36351914
    753613 7ykz:E (4.3) BS03 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753614 7ykz:F (4.3) BS01 ADP 3.6.4.10 GO:0005515 ... P32794 36351914
    753615 7ykz:F (4.3) BS02 ATP 3.6.4.10 GO:0005515 ... P32794 36351914
    753616 7ykz:F (4.3) BS03 NDT 3.6.4.10 GO:0005515 ... P32794 36351914
    753617 7yl0:A (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753618 7yl0:A (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753619 7yl0:B (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753620 7yl0:B (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753621 7yl0:B (3.2) BS03 peptide ? GO:0005179 ... P10997 36567711
    753622 7yl0:C (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753623 7yl0:D (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753624 7yl0:D (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753625 7yl0:E (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753626 7yl0:E (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753627 7yl0:F (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753628 7yl0:F (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753629 7yl1:A (2.48) BS01 J6F 2.7.11.24 GO:0000165 ... P53779 N/A
    753630 7yl2:A (1.62) BS01 JCO ? N/A O60885 N/A
    753631 7yl3:A (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753632 7yl3:B (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753633 7yl3:B (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753634 7yl3:B (3.2) BS03 peptide ? GO:0005179 ... P10997 36567711
    753635 7yl3:C (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753636 7yl3:C (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753637 7yl3:I (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753638 7yl3:I (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753639 7yl3:J (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753640 7yl3:J (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753641 7yl3:L (3.2) BS01 peptide ? GO:0005179 ... P10997 36567711
    753642 7yl3:L (3.2) BS02 peptide ? GO:0005179 ... P10997 36567711
    753643 7yl4:A (2.5) BS01 CA ? N/A S6FKX6 36602978
    753644 7yl4:B (2.5) BS01 CA ? N/A S6FKX6 36602978
    753645 7yl5:A (3.0) BS01 CA ? N/A S6FKX6 36602978
    753646 7yl5:A (3.0) BS02 MAN ? N/A S6FKX6 36602978
    753647 7yl5:B (3.0) BS01 CA ? N/A S6FKX6 36602978
    753648 7yl5:B (3.0) BS02 MAN ? N/A S6FKX6 36602978
    753649 7yl5:B (3.0) BS03 MAN ? N/A S6FKX6 36602978
    753650 7yl6:A (2.95) BS01 MAN ? N/A S6FKX6 36602978
    753651 7yl6:A (2.95) BS02 MAN ? N/A S6FKX6 36602978
    753652 7yl6:A (2.95) BS03 CA ? N/A S6FKX6 36602978
    753653 7yl6:B (2.95) BS01 MAN ? N/A S6FKX6 36602978
    753654 7yl6:B (2.95) BS02 MAN ? N/A S6FKX6 36602978
    753655 7yl6:B (2.95) BS03 CA ? N/A S6FKX6 36602978
    753656 7yl8:A (1.45) BS01 SF4 ? N/A N/A N/A
    753657 7yla:6 (2.52) BS01 rna ? GO:0003924 ... P25519 N/A
    753658 7yla:6 (2.52) BS02 GNP ? GO:0003924 ... P25519 N/A
    753659 7yla:6 (2.52) BS03 MG ? GO:0003924 ... P25519 N/A
    753660 7yla:K (2.52) BS01 rna N/A GO:0003723 ... N/A N/A
    753661 7yla:L (2.52) BS01 rna ? GO:0003735 ... C3SQU2 N/A
    753662 7yla:M (2.52) BS01 rna ? GO:0001070 ... P60723 N/A
    753663 7yla:N (2.52) BS01 rna ? GO:0000027 ... P62399 N/A
    753664 7yla:N (2.52) BS02 rna ? GO:0000027 ... P62399 N/A
    753665 7yla:O (2.52) BS01 rna ? GO:0002181 ... C3SR17 N/A
    753666 7yla:P (2.52) BS01 rna ? GO:0002181 ... P0A7R1 N/A
    753667 7yla:Q (2.52) BS01 rna ? GO:0000027 ... P0A7J7 N/A
    753668 7yla:R (2.52) BS01 rna ? GO:0002181 ... P0AA10 N/A
    753669 7yla:S (2.52) BS01 rna ? GO:0003735 ... C3SQZ2 N/A
    753670 7yla:T (2.52) BS01 rna ? GO:0002181 ... P02413 N/A
    753671 7yla:U (2.52) BS01 rna ? GO:0000027 ... P0ADY7 N/A
    753672 7yla:U (2.52) BS02 rna ? GO:0000027 ... P0ADY7 N/A
    753673 7yla:V (2.52) BS01 rna N/A GO:0003735 ... N/A N/A
    753674 7yla:W (2.52) BS01 rna ? GO:0002181 ... P0C018 N/A
    753675 7yla:W (2.52) BS02 rna ? GO:0002181 ... P0C018 N/A
    753676 7yla:X (2.52) BS01 rna ? GO:0000027 ... P0A7K6 N/A
    753677 7yla:Y (2.52) BS01 rna ? GO:0000027 ... P0A7L3 N/A
    753678 7yla:Z (2.52) BS01 rna ? GO:0002181 ... P0AG48 N/A
    753679 7yla:a (2.52) BS01 rna ? GO:0002181 ... P61175 N/A
    753680 7yla:b (2.52) BS01 rna ? GO:0000027 ... P0ADZ0 N/A
    753681 7yla:c (2.52) BS01 rna N/A GO:0003723 ... N/A N/A
    753682 7yla:d (2.52) BS01 rna ? GO:0000027 ... P68919 N/A
    753683 7yla:e (2.52) BS01 rna ? GO:0003735 ... P0A7L8 N/A
    753684 7yla:e (2.52) BS02 rna ? GO:0003735 ... P0A7L8 N/A
    753685 7yla:f (2.52) BS01 rna ? GO:0000027 ... P0A7M2 N/A
    753686 7yla:g (2.52) BS01 rna ? GO:0000027 ... P0A7M6 N/A
    753687 7yla:h (2.52) BS01 rna ? GO:0000027 ... P0AG51 N/A
    753688 7yla:i (2.52) BS01 rna N/A GO:0003735 ... N/A N/A
    753689 7yla:j (2.52) BS01 rna ? GO:0000027 ... P0A7N9 N/A
    753690 7yla:k (2.52) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    753691 7yla:l (2.52) BS01 rna ? GO:0002181 ... P0A7Q1 N/A
    753692 7yla:m (2.52) BS01 rna ? GO:0002181 ... P0A7Q6 N/A
    753693 7yla:m (2.52) BS02 ZN ? GO:0002181 ... P0A7Q6 N/A
    753694 7yle:A (2.052) BS01 DQY ? GO:0022857 ... A3SME7 36707613
    753695 7ylg:A (1.8) BS01 GSH 3.2.2.6 GO:0007165 ... H2D5F4 37079400
    753696 7ylk:A (1.63) BS01 KKC 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 36825656
    753697 7ylk:A (1.63) BS02 IRQ 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 36825656
    753698 7yll:A (2.60001) BS01 MG 2.7.7.7 GO:0000287 ... P58965 37683741
    753699 7ylo:A (1.83) BS01 HEM ? GO:0004601 ... A0A0G9GI91 N/A
    753700 7ylo:B (1.83) BS01 HEM ? GO:0004601 ... A0A0G9GI91 N/A
    753701 7ylq:A (2.68) BS01 ZN ? N/A Q93CA6 N/A
    753702 7ylq:B (2.68) BS01 ZN ? N/A Q93CA6 N/A
    753703 7ylr:A (1.68) BS01 FMN ? GO:0000166 ... C5CSP5 N/A
    753704 7ylr:A (1.68) BS02 FES ? GO:0000166 ... C5CSP5 N/A
    753705 7yls:B (1.8) BS01 FES ? GO:0005506 ... C5CSP6 N/A
    753706 7yls:B (1.8) BS02 FE ? GO:0005506 ... C5CSP6 N/A
    753707 7ylw:A (3.39) BS01 ADP ? GO:0005515 ... P12612 36921056
    753708 7ylw:A (3.39) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753709 7ylw:B (3.39) BS01 ADP ? GO:0005515 ... P39076 36921056
    753710 7ylw:B (3.39) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753711 7ylw:D (3.39) BS01 ADP ? GO:0005524 ... P39078 36921056
    753712 7ylw:D (3.39) BS02 MG ? GO:0005524 ... P39078 36921056
    753713 7ylw:D (3.39) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753714 7ylw:E (3.39) BS01 ADP ? GO:0005524 ... P40413 36921056
    753715 7ylw:E (3.39) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753716 7ylw:G (3.39) BS01 ADP ? GO:0005524 ... P39077 36921056
    753717 7ylw:G (3.39) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753718 7ylw:H (3.39) BS01 ADP ? GO:0005524 ... P42943 36921056
    753719 7ylw:H (3.39) BS02 AF3 ? GO:0005524 ... P42943 36921056
    753720 7ylw:Q (3.39) BS01 ADP ? GO:0005524 ... P47079 36921056
    753721 7ylw:T (3.39) BS01 GTP ? GO:0003924 ... N/A 36921056
    753722 7ylw:Z (3.39) BS01 ADP ? GO:0005524 ... P39079 36921056
    753723 7ylw:Z (3.39) BS02 AF3 ? GO:0005524 ... P39079 36921056
    753724 7ylw:a (3.39) BS01 ADP ? GO:0005515 ... P12612 36921056
    753725 7ylw:a (3.39) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753726 7ylw:b (3.39) BS01 ADP ? GO:0005515 ... P39076 36921056
    753727 7ylw:b (3.39) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753728 7ylw:d (3.39) BS01 ADP ? GO:0005524 ... P39078 36921056
    753729 7ylw:d (3.39) BS02 MG ? GO:0005524 ... P39078 36921056
    753730 7ylw:d (3.39) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753731 7ylw:e (3.39) BS01 ADP ? GO:0005524 ... P40413 36921056
    753732 7ylw:e (3.39) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753733 7ylw:g (3.39) BS01 ADP ? GO:0005524 ... P39077 36921056
    753734 7ylw:g (3.39) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753735 7ylw:h (3.39) BS01 ADP ? GO:0005524 ... P42943 36921056
    753736 7ylw:h (3.39) BS02 AF3 ? GO:0005524 ... P42943 36921056
    753737 7ylw:q (3.39) BS01 ADP ? GO:0005524 ... P47079 36921056
    753738 7ylw:z (3.39) BS01 ADP ? GO:0005524 ... P39079 36921056
    753739 7ylw:z (3.39) BS02 AF3 ? GO:0005524 ... P39079 36921056
    753740 7ylx:A (3.2) BS01 ADP ? GO:0005515 ... P12612 36921056
    753741 7ylx:A (3.2) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753742 7ylx:B (3.2) BS01 ADP ? GO:0005515 ... P39076 36921056
    753743 7ylx:B (3.2) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753744 7ylx:D (3.2) BS01 ADP ? GO:0005524 ... P39078 36921056
    753745 7ylx:D (3.2) BS02 MG ? GO:0005524 ... P39078 36921056
    753746 7ylx:D (3.2) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753747 7ylx:E (3.2) BS01 ADP ? GO:0005524 ... P40413 36921056
    753748 7ylx:E (3.2) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753749 7ylx:G (3.2) BS01 ADP ? GO:0005524 ... P39077 36921056
    753750 7ylx:G (3.2) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753751 7ylx:H (3.2) BS01 ADP ? GO:0005524 ... P42943 36921056
    753752 7ylx:H (3.2) BS02 AF3 ? GO:0005524 ... P42943 36921056
    753753 7ylx:Q (3.2) BS01 ADP ? GO:0005524 ... P47079 36921056
    753754 7ylx:Z (3.2) BS01 ADP ? GO:0005524 ... P39079 36921056
    753755 7ylx:Z (3.2) BS02 AF3 ? GO:0005524 ... P39079 36921056
    753756 7ylx:a (3.2) BS01 ADP ? GO:0005515 ... P12612 36921056
    753757 7ylx:a (3.2) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753758 7ylx:b (3.2) BS01 ADP ? GO:0005515 ... P39076 36921056
    753759 7ylx:b (3.2) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753760 7ylx:d (3.2) BS01 ADP ? GO:0005524 ... P39078 36921056
    753761 7ylx:d (3.2) BS02 MG ? GO:0005524 ... P39078 36921056
    753762 7ylx:d (3.2) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753763 7ylx:e (3.2) BS01 ADP ? GO:0005524 ... P40413 36921056
    753764 7ylx:e (3.2) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753765 7ylx:g (3.2) BS01 ADP ? GO:0005524 ... P39077 36921056
    753766 7ylx:g (3.2) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753767 7ylx:h (3.2) BS01 ADP ? GO:0005524 ... P42943 36921056
    753768 7ylx:h (3.2) BS02 AF3 ? GO:0005524 ... P42943 36921056
    753769 7ylx:q (3.2) BS01 ADP ? GO:0005524 ... P47079 36921056
    753770 7ylx:z (3.2) BS01 ADP ? GO:0005524 ... P39079 36921056
    753771 7ylx:z (3.2) BS02 AF3 ? GO:0005524 ... P39079 36921056
    753772 7yly:A (3.05) BS01 ADP ? GO:0005515 ... P12612 36921056
    753773 7yly:A (3.05) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753774 7yly:B (3.05) BS01 ADP ? GO:0005515 ... P39076 36921056
    753775 7yly:B (3.05) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753776 7yly:D (3.05) BS01 ADP ? GO:0005524 ... P39078 36921056
    753777 7yly:D (3.05) BS02 MG ? GO:0005524 ... P39078 36921056
    753778 7yly:D (3.05) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753779 7yly:E (3.05) BS01 ADP ? GO:0005524 ... P40413 36921056
    753780 7yly:E (3.05) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753781 7yly:G (3.05) BS01 ADP ? GO:0005524 ... P39077 36921056
    753782 7yly:G (3.05) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753783 7yly:H (3.05) BS01 ADP ? GO:0005524 ... P42943 36921056
    753784 7yly:H (3.05) BS02 AF3 ? GO:0005524 ... P42943 36921056
    753785 7yly:Q (3.05) BS01 ADP ? GO:0005524 ... P47079 36921056
    753786 7yly:Z (3.05) BS01 ADP ? GO:0005524 ... P39079 36921056
    753787 7yly:Z (3.05) BS02 AF3 ? GO:0005524 ... P39079 36921056
    753788 7yly:a (3.05) BS01 ADP ? GO:0005515 ... P12612 36921056
    753789 7yly:a (3.05) BS02 AF3 ? GO:0005515 ... P12612 36921056
    753790 7yly:b (3.05) BS01 ADP ? GO:0005515 ... P39076 36921056
    753791 7yly:b (3.05) BS02 AF3 ? GO:0005515 ... P39076 36921056
    753792 7yly:d (3.05) BS01 ADP ? GO:0005524 ... P39078 36921056
    753793 7yly:d (3.05) BS02 MG ? GO:0005524 ... P39078 36921056
    753794 7yly:d (3.05) BS03 AF3 ? GO:0005524 ... P39078 36921056
    753795 7yly:e (3.05) BS01 ADP ? GO:0005524 ... P40413 36921056
    753796 7yly:e (3.05) BS02 AF3 ? GO:0005524 ... P40413 36921056
    753797 7yly:g (3.05) BS01 ADP ? GO:0005524 ... P39077 36921056
    753798 7yly:g (3.05) BS02 AF3 ? GO:0005524 ... P39077 36921056
    753799 7yly:h (3.05) BS01 ADP ? GO:0005524 ... P42943 36921056
    753800 7yly:h (3.05) BS02 AF3 ? GO:0005524 ... P42943 36921056

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).