SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    756201 7yy4:B (1.671) BS01 I7W 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756202 7yy4:C (1.671) BS01 I7W 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756203 7yy5:B (1.499) BS01 I7L 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756204 7yy5:C (1.499) BS01 I7L 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756205 7yy6:A (1.506) BS01 I7S 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756206 7yy6:B (1.506) BS01 I7S 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756207 7yy6:C (1.506) BS01 I7S 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756208 7yy7:B (1.538) BS01 BZJ 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756209 7yy7:C (1.538) BS01 BZJ 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756210 7yy8:B (1.516) BS01 3IL 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756211 7yy8:C (1.516) BS01 4Z9 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756212 7yy9:A (1.485) BS01 I7Z 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756213 7yy9:B (1.485) BS01 I7Z 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756214 7yy9:C (1.485) BS01 I7Z 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756215 7yya:A (1.807) BS01 EQ5 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756216 7yya:B (1.807) BS01 EQ5 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756217 7yyb:B (1.751) BS01 QX4 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756218 7yyb:C (1.751) BS01 QX4 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756219 7yyc:A (1.499) BS01 I7O 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756220 7yyc:B (1.499) BS01 I7O 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756221 7yyc:C (1.499) BS01 I7O 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    756222 7yyh:A (8.9) BS01 dna ? GO:0000132 ... P49450 35420891
    756223 7yyh:A (8.9) BS02 dna ? GO:0000132 ... P49450 35420891
    756224 7yyh:B (8.9) BS01 dna ? GO:0000781 ... P62805 35420891
    756225 7yyh:B (8.9) BS02 dna ? GO:0000781 ... P62805 35420891
    756226 7yyh:C (8.9) BS01 dna ? GO:0000786 ... Q93077 35420891
    756227 7yyh:C (8.9) BS02 dna ? GO:0000786 ... Q93077 35420891
    756228 7yyh:D (8.9) BS01 dna ? GO:0000786 ... P62807 35420891
    756229 7yyh:E (8.9) BS01 dna ? GO:0000132 ... P49450 35420891
    756230 7yyh:E (8.9) BS02 peptide ? GO:0000132 ... P49450 35420891
    756231 7yyh:E (8.9) BS03 dna ? GO:0000132 ... P49450 35420891
    756232 7yyh:F (8.9) BS01 dna ? GO:0000781 ... P62805 35420891
    756233 7yyh:F (8.9) BS02 dna ? GO:0000781 ... P62805 35420891
    756234 7yyh:G (8.9) BS01 dna ? GO:0000786 ... Q93077 35420891
    756235 7yyh:G (8.9) BS02 peptide ? GO:0000786 ... Q93077 35420891
    756236 7yyh:G (8.9) BS03 dna ? GO:0000786 ... Q93077 35420891
    756237 7yyh:N (8.9) BS01 dna ? GO:0000775 ... Q96H22 35420891
    756238 7yyh:N (8.9) BS02 dna ? GO:0000775 ... Q96H22 35420891
    756239 7yyh:h (8.9) BS01 dna ? GO:0000786 ... P62807 35420891
    756240 7yyh:h (8.9) BS02 peptide ? GO:0000786 ... P62807 35420891
    756241 7yyh:h (8.9) BS03 dna ? GO:0000786 ... P62807 35420891
    756242 7yyk:A (2.6) BS01 FUC ? N/A P07996 35597280
    756243 7yyk:A (2.6) BS02 FUC ? N/A P07996 35597280
    756244 7yyl:A (3.25) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756245 7yyl:B (3.25) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756246 7yyl:C (3.25) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756247 7yyl:D (3.25) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756248 7yyl:E (3.25) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756249 7yyl:F (3.25) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756250 7yyl:G (3.25) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756251 7yyl:H (3.25) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756252 7yym:A (4.19) BS01 rna 3.1.26.3 GO:0000122 ... Q8R418 36332606
    756253 7yyn:A (6.21) BS01 rna 3.1.26.3 GO:0003723 ... Q8R418 36332606
    756254 7yyo:A (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756255 7yyo:C (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756256 7yyo:E (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756257 7yyo:G (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756258 7yyo:I (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756259 7yyo:K (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756260 7yyo:M (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756261 7yyo:O (2.87) BS01 CAP 4.1.1.39 GO:0000287 ... A5CKD0 37015227
    756262 7yyp:A (2.9) BS01 GDP ? GO:0003743 ... Q9UZK7 35694843
    756263 7yyq:A () BS01 GTP 3.6.5.- N/A N/A N/A
    756264 7yyq:A () BS02 CA 3.6.5.- N/A N/A N/A
    756265 7yyq:A () BS03 IBL 3.6.5.- N/A N/A N/A
    756266 7yyq:B () BS01 IBL ? N/A N/A N/A
    756267 7yyq:B () BS02 GTP ? N/A N/A N/A
    756268 7yyv:A () BS01 GTP 3.6.5.- N/A N/A N/A
    756269 7yyv:A () BS02 CA 3.6.5.- N/A N/A N/A
    756270 7yyv:A () BS03 VYT 3.6.5.- N/A N/A N/A
    756271 7yyv:B () BS01 GDP ? N/A N/A N/A
    756272 7yyv:B () BS02 VYT ? N/A N/A N/A
    756273 7yyw:A () BS01 GTP 3.6.5.- N/A N/A N/A
    756274 7yyw:A () BS02 CA 3.6.5.- N/A N/A N/A
    756275 7yyw:A () BS03 VYT 3.6.5.- N/A N/A N/A
    756276 7yyw:B () BS01 GDP ? N/A N/A N/A
    756277 7yyw:B () BS02 VYT ? N/A N/A N/A
    756278 7yyx:A () BS01 GTP 3.6.5.- N/A N/A N/A
    756279 7yyx:A () BS02 CA 3.6.5.- N/A N/A N/A
    756280 7yyx:A () BS03 VYT 3.6.5.- N/A N/A N/A
    756281 7yyx:B () BS01 GDP ? N/A N/A N/A
    756282 7yyx:B () BS02 VYT ? N/A N/A N/A
    756283 7yyy:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756284 7yyy:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756285 7yyy:A (2.2) BS03 VYT 3.6.5.- GO:0000226 ... P81947 36807348
    756286 7yyy:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756287 7yyy:B (2.2) BS02 VYT ? GO:0000226 ... Q6B856 36807348
    756288 7yyz:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756289 7yyz:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756290 7yyz:A (2.2) BS03 VYT 3.6.5.- GO:0000226 ... P81947 36807348
    756291 7yyz:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756292 7yyz:B (2.2) BS02 VYT ? GO:0000226 ... Q6B856 36807348
    756293 7yz0:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756294 7yz0:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756295 7yz0:A (2.2) BS03 VYT 3.6.5.- GO:0000226 ... P81947 36807348
    756296 7yz0:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756297 7yz0:B (2.2) BS02 VYT ? GO:0000226 ... Q6B856 36807348
    756298 7yz1:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756299 7yz1:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756300 7yz1:A (2.2) BS03 VYT 3.6.5.- GO:0000226 ... P81947 36807348
    756301 7yz1:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756302 7yz1:B (2.2) BS02 VYT ? GO:0000226 ... Q6B856 36807348
    756303 7yz2:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756304 7yz2:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756305 7yz3:A (1.8) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756306 7yz3:A (1.8) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756307 7yz3:B (1.8) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756308 7yz5:A (2.11) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756309 7yz5:A (2.11) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756310 7yz5:B (2.11) BS01 GDP ? GO:0000226 ... Q6B856 36807348
    756311 7yz6:A (2.1) BS01 GTP 3.6.5.- GO:0000226 ... P81947 36807348
    756312 7yz6:A (2.1) BS02 CA 3.6.5.- GO:0000226 ... P81947 36807348
    756313 7yz6:A (2.1) BS03 IBL 3.6.5.- GO:0000226 ... P81947 36807348
    756314 7yz6:B (2.1) BS01 IBL ? GO:0000226 ... Q6B856 36807348
    756315 7yz6:B (2.1) BS02 GTP ? GO:0000226 ... Q6B856 36807348
    756316 7yz7:A (0.98) BS01 dna ? GO:0003700 ... Q9I9E1 36435807
    756317 7yz7:A (0.98) BS02 dna ? GO:0003700 ... Q9I9E1 36435807
    756318 7yz9:A (1.97) BS01 MN 4.6.1.1 GO:0009190 ... P9WQ35 35980026
    756319 7yz9:A (1.97) BS02 MN 4.6.1.1 GO:0009190 ... P9WQ35 35980026
    756320 7yz9:A (1.97) BS03 ONM 4.6.1.1 GO:0009190 ... P9WQ35 35980026
    756321 7yza:A (1.18) BS01 dna ? GO:0003700 ... Q9I9E1 36435807
    756322 7yza:A (1.18) BS02 dna ? GO:0003700 ... Q9I9E1 36435807
    756323 7yzb:A (1.47) BS01 dna ? GO:0003700 ... O75593 36435807
    756324 7yzb:A (1.47) BS02 dna ? GO:0003700 ... O75593 36435807
    756325 7yzc:A (2.17) BS01 dna ? GO:0003700 ... Q9I9E1 36435807
    756326 7yzc:A (2.17) BS02 dna ? GO:0003700 ... Q9I9E1 36435807
    756327 7yzd:A (2.13) BS01 dna ? GO:0003700 ... Q9I9E1 36435807
    756328 7yzd:A (2.13) BS02 dna ? GO:0003700 ... Q9I9E1 36435807
    756329 7yze:A (1.99) BS01 dna ? GO:0003700 ... Q9Y261 36435807
    756330 7yze:A (1.99) BS02 dna ? GO:0003700 ... Q9Y261 36435807
    756331 7yzf:C (2.18) BS01 dna ? GO:0003700 ... Q9Y261 36435807
    756332 7yzf:C (2.18) BS02 dna ? GO:0003700 ... Q9Y261 36435807
    756333 7yzg:A (2.82) BS01 dna ? GO:0003700 ... P70056 36435807
    756334 7yzg:A (2.82) BS02 dna ? GO:0003700 ... P70056 36435807
    756335 7yzh:AAA (1.79) BS01 ZN 4.2.1.1 GO:0004089 ... A0A3Q0KSG2 35635137
    756336 7yzh:AAA (1.79) BS02 HFF 4.2.1.1 GO:0004089 ... A0A3Q0KSG2 35635137
    756337 7yzh:BBB (1.79) BS01 ZN 4.2.1.1 GO:0004089 ... A0A3Q0KSG2 35635137
    756338 7yzh:BBB (1.79) BS02 HFF 4.2.1.1 GO:0004089 ... A0A3Q0KSG2 35635137
    756339 7yzi:A (3.83) BS01 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756340 7yzi:A (3.83) BS02 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756341 7yzi:A (3.83) BS03 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756342 7yzi:A (3.83) BS04 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756343 7yzi:B (3.83) BS01 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756344 7yzi:B (3.83) BS02 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756345 7yzi:B (3.83) BS03 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756346 7yzi:B (3.83) BS04 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756347 7yzj:H (2.6) BS01 peptide N/A N/A N/A N/A
    756348 7yzj:L (2.6) BS01 peptide N/A N/A N/A N/A
    756349 7yzk:A (3.57) BS01 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756350 7yzk:A (3.57) BS02 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756351 7yzk:A (3.57) BS03 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756352 7yzk:A (3.57) BS04 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756353 7yzk:B (3.57) BS01 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756354 7yzk:B (3.57) BS02 ONM 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756355 7yzk:B (3.57) BS03 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756356 7yzk:B (3.57) BS04 MN 4.6.1.1 GO:0000287 ... P9WQ35 35980026
    756357 7yzm:A (1.82) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756358 7yzm:A (1.82) BS02 BU3 ? GO:0016836 ... Q3AET9 35905315
    756359 7yzm:A (1.82) BS03 BU3 ? GO:0016836 ... Q3AET9 35905315
    756360 7yzm:B (1.82) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756361 7yzm:C (1.82) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756362 7yzm:C (1.82) BS02 BU3 ? GO:0016836 ... Q3AET9 35905315
    756363 7yzm:C (1.82) BS03 BU3 ? GO:0016836 ... Q3AET9 35905315
    756364 7yzm:D (1.82) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756365 7yzm:D (1.82) BS02 BU3 ? GO:0016836 ... Q3AET9 35905315
    756366 7yzm:D (1.82) BS03 BU3 ? GO:0016836 ... Q3AET9 35905315
    756367 7yzm:E (1.82) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756368 7yzm:E (1.82) BS02 ANP ? GO:0000166 ... Q3AET8 35905315
    756369 7yzm:E (1.82) BS03 BU3 ? GO:0000166 ... Q3AET8 35905315
    756370 7yzm:F (1.82) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756371 7yzm:F (1.82) BS02 ANP ? GO:0000166 ... Q3AET8 35905315
    756372 7yzm:F (1.82) BS03 BU3 ? GO:0000166 ... Q3AET8 35905315
    756373 7yzm:F (1.82) BS04 BU3 ? GO:0000166 ... Q3AET8 35905315
    756374 7yzm:F (1.82) BS05 BU3 ? GO:0000166 ... Q3AET8 35905315
    756375 7yzm:G (1.82) BS01 ANP ? GO:0000166 ... Q3AET8 35905315
    756376 7yzm:G (1.82) BS02 BU3 ? GO:0000166 ... Q3AET8 35905315
    756377 7yzm:G (1.82) BS03 BU3 ? GO:0000166 ... Q3AET8 35905315
    756378 7yzm:G (1.82) BS04 BU3 ? GO:0000166 ... Q3AET8 35905315
    756379 7yzm:G (1.82) BS05 SF4 ? GO:0000166 ... Q3AET8 35905315
    756380 7yzm:H (1.82) BS01 BU3 ? GO:0000166 ... Q3AET8 35905315
    756381 7yzm:H (1.82) BS02 SF4 ? GO:0000166 ... Q3AET8 35905315
    756382 7yzm:H (1.82) BS03 ANP ? GO:0000166 ... Q3AET8 35905315
    756383 7yzm:H (1.82) BS04 BU3 ? GO:0000166 ... Q3AET8 35905315
    756384 7yzm:H (1.82) BS05 BU3 ? GO:0000166 ... Q3AET8 35905315
    756385 7yzn:A (1.7) BS01 MG ? GO:0003743 ... Q9UZK7 35694843
    756386 7yzn:A (1.7) BS02 GTP ? GO:0003743 ... Q9UZK7 35694843
    756387 7yzo:A (3.4) BS01 dna ? GO:0000014 ... P0AG76 35987200
    756388 7yzo:A (3.4) BS02 dna ? GO:0000014 ... P0AG76 35987200
    756389 7yzo:A (3.4) BS03 MN ? GO:0000014 ... P0AG76 35987200
    756390 7yzo:A (3.4) BS04 MN ? GO:0000014 ... P0AG76 35987200
    756391 7yzo:B (3.4) BS01 MN ? GO:0000014 ... P0AG76 35987200
    756392 7yzo:B (3.4) BS02 MN ? GO:0000014 ... P0AG76 35987200
    756393 7yzo:C (3.4) BS01 dna ? GO:0000014 ... P13458 35987200
    756394 7yzo:C (3.4) BS02 dna ? GO:0000014 ... P13458 35987200
    756395 7yzo:C (3.4) BS03 ADP ? GO:0000014 ... P13458 35987200
    756396 7yzo:C (3.4) BS04 MG ? GO:0000014 ... P13458 35987200
    756397 7yzo:C (3.4) BS05 ADP ? GO:0000014 ... P13458 35987200
    756398 7yzo:D (3.4) BS01 dna ? GO:0000014 ... P13458 35987200
    756399 7yzo:D (3.4) BS02 dna ? GO:0000014 ... P13458 35987200
    756400 7yzo:D (3.4) BS03 ADP ? GO:0000014 ... P13458 35987200

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).