SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3773 3774 3775 3776 3777 3778 3779 3780 3781 3782 3783 3784 3785 3786 3787 3788 3789 3790 3791 3792 3793 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    756401 7yzo:D (3.4) BS04 ADP ? GO:0000014 ... P13458 35987200
    756402 7yzo:D (3.4) BS05 MG ? GO:0000014 ... P13458 35987200
    756403 7yzp:A (4.0) BS01 dna ? GO:0000014 ... P0AG76 35987200
    756404 7yzp:A (4.0) BS02 MN ? GO:0000014 ... P0AG76 35987200
    756405 7yzp:A (4.0) BS03 MN ? GO:0000014 ... P0AG76 35987200
    756406 7yzp:B (4.0) BS01 MN ? GO:0000014 ... P0AG76 35987200
    756407 7yzp:B (4.0) BS02 MN ? GO:0000014 ... P0AG76 35987200
    756408 7yzp:C (4.0) BS01 dna ? GO:0000014 ... P13458 35987200
    756409 7yzp:C (4.0) BS02 ADP ? GO:0000014 ... P13458 35987200
    756410 7yzp:C (4.0) BS03 MG ? GO:0000014 ... P13458 35987200
    756411 7yzp:C (4.0) BS04 ADP ? GO:0000014 ... P13458 35987200
    756412 7yzp:D (4.0) BS01 dna ? GO:0000014 ... P13458 35987200
    756413 7yzp:D (4.0) BS02 ADP ? GO:0000014 ... P13458 35987200
    756414 7yzp:D (4.0) BS03 ADP ? GO:0000014 ... P13458 35987200
    756415 7yzq:A (1.96) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756416 7yzq:B (1.96) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756417 7yzq:B (1.96) BS02 BU3 ? GO:0016836 ... Q3AET9 35905315
    756418 7yzq:C (1.96) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756419 7yzq:D (1.96) BS01 BJ8 ? GO:0016836 ... Q3AET9 35905315
    756420 7yzq:D (1.96) BS02 BU3 ? GO:0016836 ... Q3AET9 35905315
    756421 7yzq:E (1.96) BS01 ADP ? GO:0000166 ... Q3AET8 35905315
    756422 7yzq:E (1.96) BS02 ALF ? GO:0000166 ... Q3AET8 35905315
    756423 7yzq:E (1.96) BS03 SF4 ? GO:0000166 ... Q3AET8 35905315
    756424 7yzq:F (1.96) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756425 7yzq:F (1.96) BS02 ADP ? GO:0000166 ... Q3AET8 35905315
    756426 7yzq:F (1.96) BS03 ALF ? GO:0000166 ... Q3AET8 35905315
    756427 7yzq:G (1.96) BS01 ADP ? GO:0000166 ... Q3AET8 35905315
    756428 7yzq:G (1.96) BS02 ALF ? GO:0000166 ... Q3AET8 35905315
    756429 7yzq:G (1.96) BS03 SF4 ? GO:0000166 ... Q3AET8 35905315
    756430 7yzq:H (1.96) BS01 SF4 ? GO:0000166 ... Q3AET8 35905315
    756431 7yzq:H (1.96) BS02 ADP ? GO:0000166 ... Q3AET8 35905315
    756432 7yzq:H (1.96) BS03 ALF ? GO:0000166 ... Q3AET8 35905315
    756433 7yzr:A (6.92) BS01 MG 7.2.2.13 GO:0000166 ... P05024 35926706
    756434 7yzr:A (6.92) BS02 BEF 7.2.2.13 GO:0000166 ... P05024 35926706
    756435 7yzr:C (6.92) BS01 MG 7.2.2.13 GO:0000166 ... P05024 35926706
    756436 7yzr:C (6.92) BS02 BEF 7.2.2.13 GO:0000166 ... P05024 35926706
    756437 7yzs:AAA (1.8) BS01 YZT ? GO:0042597 ... A9CEY9 35341160
    756438 7yzt:A (1.85) BS01 HEM N/A GO:0004601 ... N/A 39818373
    756439 7yzt:B (1.85) BS01 HEM N/A GO:0004601 ... N/A 39818373
    756440 7yzt:C (1.85) BS01 HEM N/A GO:0004601 ... N/A 39818373
    756441 7yzu:A (1.59) BS01 DO7 ? GO:0042597 ... A9CEY9 35341160
    756442 7yzx:A (1.9) BS01 peptide 3.4.21.110 GO:0004252 ... P15926 36478677
    756443 7yzx:A (1.9) BS02 CA 3.4.21.110 GO:0004252 ... P15926 36478677
    756444 7yzz:A (1.29) BS01 ZN ? GO:0004035 ... Q93P54 36194497
    756445 7yzz:A (1.29) BS02 ZN ? GO:0004035 ... Q93P54 36194497
    756446 7yzz:A (1.29) BS03 MG ? GO:0004035 ... Q93P54 36194497
    756447 7yzz:A (1.29) BS04 PO4 ? GO:0004035 ... Q93P54 36194497
    756448 7yzz:A (1.29) BS05 CL ? GO:0004035 ... Q93P54 36194497
    756449 7yzz:A (1.29) BS06 MG ? GO:0004035 ... Q93P54 36194497
    756450 7yzz:B (1.29) BS01 ZN ? GO:0004035 ... Q93P54 36194497
    756451 7yzz:B (1.29) BS02 ZN ? GO:0004035 ... Q93P54 36194497
    756452 7yzz:B (1.29) BS03 MG ? GO:0004035 ... Q93P54 36194497
    756453 7yzz:B (1.29) BS04 PO4 ? GO:0004035 ... Q93P54 36194497
    756454 7yzz:B (1.29) BS05 MG ? GO:0004035 ... Q93P54 36194497
    756455 7z00:B (2.6) BS01 ZN ? GO:0004035 ... Q93P54 36194497
    756456 7z00:B (2.6) BS02 ZN ? GO:0004035 ... Q93P54 36194497
    756457 7z00:B (2.6) BS03 MG ? GO:0004035 ... Q93P54 36194497
    756458 7z00:B (2.6) BS04 PO4 ? GO:0004035 ... Q93P54 36194497
    756459 7z01:A (1.82) BS01 GTP 3.6.5.- GO:0000226 ... P81947 35290733
    756460 7z01:A (1.82) BS02 CA 3.6.5.- GO:0000226 ... P81947 35290733
    756461 7z01:A (1.82) BS03 I8R 3.6.5.- GO:0000226 ... P81947 35290733
    756462 7z01:B (1.82) BS01 GDP ? GO:0000226 ... Q6B856 35290733
    756463 7z01:B (1.82) BS02 I8R ? GO:0000226 ... Q6B856 35290733
    756464 7z02:A (2.36) BS01 GTP 3.6.5.- GO:0000226 ... P81947 35290733
    756465 7z02:A (2.36) BS02 MG 3.6.5.- GO:0000226 ... P81947 35290733
    756466 7z02:B (2.36) BS01 GDP ? GO:0000226 ... Q6B856 35290733
    756467 7z02:B (2.36) BS02 I8N ? GO:0000226 ... Q6B856 35290733
    756468 7z03:A (3.7) BS01 dna ? GO:0000014 ... P0AG76 35987200
    756469 7z03:A (3.7) BS02 dna ? GO:0000014 ... P0AG76 35987200
    756470 7z03:A (3.7) BS03 MN ? GO:0000014 ... P0AG76 35987200
    756471 7z03:A (3.7) BS04 MN ? GO:0000014 ... P0AG76 35987200
    756472 7z03:B (3.7) BS01 MN ? GO:0000014 ... P0AG76 35987200
    756473 7z03:B (3.7) BS02 MN ? GO:0000014 ... P0AG76 35987200
    756474 7z03:C (3.7) BS01 dna ? GO:0000014 ... P13458 35987200
    756475 7z03:C (3.7) BS02 ADP ? GO:0000014 ... P13458 35987200
    756476 7z03:C (3.7) BS03 MG ? GO:0000014 ... P13458 35987200
    756477 7z03:C (3.7) BS04 ADP ? GO:0000014 ... P13458 35987200
    756478 7z03:D (3.7) BS01 dna ? GO:0000014 ... P13458 35987200
    756479 7z03:D (3.7) BS02 dna ? GO:0000014 ... P13458 35987200
    756480 7z03:D (3.7) BS03 ADP ? GO:0000014 ... P13458 35987200
    756481 7z03:D (3.7) BS04 ADP ? GO:0000014 ... P13458 35987200
    756482 7z03:D (3.7) BS05 MG ? GO:0000014 ... P13458 35987200
    756483 7z04:A (7.5) BS01 BEF 7.2.2.13 GO:0000166 ... P05024 35926706
    756484 7z04:A (7.5) BS02 MG 7.2.2.13 GO:0000166 ... P05024 35926706
    756485 7z04:C (7.5) BS01 BEF 7.2.2.13 GO:0000166 ... P05024 35926706
    756486 7z04:C (7.5) BS02 MG 7.2.2.13 GO:0000166 ... P05024 35926706
    756487 7z05:A (2.33) BS01 SAH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.1.-.-
    3.1.13.-
    3.4.21.-
    3.6.4.12
    3.6.4.13
    N/A Q008X6 36265859
    756488 7z0e:P (1.22) BS01 SQL ? GO:0005216 ... P02945 35484235
    756489 7z0f:A (2.396) BS01 GTP N/A GO:0005200 ... N/A 35507869
    756490 7z0f:B (2.396) BS01 GDP N/A GO:0003924 ... N/A 35507869
    756491 7z0g:A (3.487) BS01 GTP N/A GO:0005200 ... N/A 35507869
    756492 7z0g:B (3.487) BS01 GDP N/A GO:0003924 ... N/A 35507869
    756493 7z0g:R (3.487) BS01 GTP N/A GO:0005200 ... N/A 35507869
    756494 7z0g:S (3.487) BS01 GDP N/A GO:0003924 ... N/A 35507869
    756495 7z0h:A (2.6) BS01 ZN 2.7.7.6 GO:0000428 ... P04051 36977686
    756496 7z0h:A (2.6) BS02 ZN 2.7.7.6 GO:0000428 ... P04051 36977686
    756497 7z0h:A (2.6) BS03 MG 2.7.7.6 GO:0000428 ... P04051 36977686
    756498 7z0h:A (2.6) BS04 MG 2.7.7.6 GO:0000428 ... P04051 36977686
    756499 7z0h:B (2.6) BS01 peptide 2.7.7.6 GO:0000428 ... P22276 36977686
    756500 7z0h:C (2.6) BS01 peptide ? GO:0000428 ... P07703 36977686
    756501 7z0h:I (2.6) BS01 MG ? GO:0000428 ... Q04307 36977686
    756502 7z0h:I (2.6) BS02 ZN ? GO:0000428 ... Q04307 36977686
    756503 7z0h:J (2.6) BS01 ZN ? GO:0000428 ... P22139 36977686
    756504 7z0h:K (2.6) BS01 peptide ? GO:0000428 ... P28000 36977686
    756505 7z0h:L (2.6) BS01 ZN ? GO:0003677 ... P40422 36977686
    756506 7z0n:AAA (2.4) BS01 MAN 3.1.4.39 GO:0001953 ... Q64610 35440138
    756507 7z0n:AAA (2.4) BS02 MAN 3.1.4.39 GO:0001953 ... Q64610 35440138
    756508 7z0n:AAA (2.4) BS03 ZN 3.1.4.39 GO:0001953 ... Q64610 35440138
    756509 7z0n:AAA (2.4) BS04 ZN 3.1.4.39 GO:0001953 ... Q64610 35440138
    756510 7z0n:AAA (2.4) BS05 CA 3.1.4.39 GO:0001953 ... Q64610 35440138
    756511 7z0n:AAA (2.4) BS06 I8K 3.1.4.39 GO:0001953 ... Q64610 35440138
    756512 7z0o:C (2.8) BS01 dna ? GO:0000500 ... P61830 35442737
    756513 7z0o:D (2.8) BS01 dna ? GO:0000182 ... Q02983 35442737
    756514 7z0o:E (2.8) BS01 dna ? GO:0000500 ... P53437 35442737
    756515 7z0o:E (2.8) BS02 dna ? GO:0000500 ... P53437 35442737
    756516 7z0p:AAA (2.52) BS01 I8H 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0DTC1 35807537
    756517 7z0q:C (2.1) BS01 peptide ? GO:0006955 ... P01903 37142807
    756518 7z0q:D (2.1) BS01 peptide ? GO:0006955 ... D7RIG5 37142807
    756519 7z0r:A (1.66) BS01 ZN ? GO:0003700 ... Q9C5T4 35660042
    756520 7z0r:B (1.66) BS01 ZN ? GO:0003700 ... Q9C5T4 35660042
    756521 7z0s:B (2.6) BS01 SF4 ? GO:0006007 ... P0AAK1 36104349
    756522 7z0s:B (2.6) BS02 SF4 ? GO:0006007 ... P0AAK1 36104349
    756523 7z0s:B (2.6) BS03 SF4 ? GO:0006007 ... P0AAK1 36104349
    756524 7z0s:B (2.6) BS04 SF4 ? GO:0006007 ... P0AAK1 36104349
    756525 7z0s:D (2.6) BS01 DR9 ? GO:0005886 ... P16430 36104349
    756526 7z0s:D (2.6) BS02 LMN ? GO:0005886 ... P16430 36104349
    756527 7z0s:E (2.6) BS01 FCO ? GO:0008137 ... P16431 36104349
    756528 7z0s:E (2.6) BS02 DR9 ? GO:0008137 ... P16431 36104349
    756529 7z0s:F (2.6) BS01 SF4 ? GO:0003954 ... P16432 36104349
    756530 7z0s:F (2.6) BS02 SF4 ? GO:0003954 ... P16432 36104349
    756531 7z0s:F (2.6) BS03 FE ? GO:0003954 ... P16432 36104349
    756532 7z0s:G (2.6) BS01 SF4 ? GO:0005515 ... P16433 36104349
    756533 7z0t:A (3.4) BS01 SF4 1.17.98.4 GO:0003954 ... P07658 36104349
    756534 7z0t:A (3.4) BS02 MGD 1.17.98.4 GO:0003954 ... P07658 36104349
    756535 7z0t:A (3.4) BS03 MGD 1.17.98.4 GO:0003954 ... P07658 36104349
    756536 7z0t:B (3.4) BS01 SF4 ? GO:0006007 ... P0AAK1 36104349
    756537 7z0t:B (3.4) BS02 SF4 ? GO:0006007 ... P0AAK1 36104349
    756538 7z0t:B (3.4) BS03 SF4 ? GO:0006007 ... P0AAK1 36104349
    756539 7z0t:B (3.4) BS04 SF4 ? GO:0006007 ... P0AAK1 36104349
    756540 7z0t:E (3.4) BS01 FCO ? GO:0008137 ... P16431 36104349
    756541 7z0t:F (3.4) BS01 SF4 ? GO:0003954 ... P16432 36104349
    756542 7z0t:F (3.4) BS02 SF4 ? GO:0003954 ... P16432 36104349
    756543 7z0t:F (3.4) BS03 FE ? GO:0003954 ... P16432 36104349
    756544 7z0t:G (3.4) BS01 SF4 ? GO:0005515 ... P16433 36104349
    756545 7z0u:A (2.85) BS01 dna ? GO:0003700 ... Q9C5T4 35660042
    756546 7z0u:A (2.85) BS02 dna ? GO:0003700 ... Q9C5T4 35660042
    756547 7z0u:A (2.85) BS03 ZN ? GO:0003700 ... Q9C5T4 35660042
    756548 7z0v:A (1.45) BS01 CO 4.2.1.84 GO:0003824 ... Q84FS5 36106339
    756549 7z0w:A (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756550 7z0w:A (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756551 7z0w:B (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756552 7z0w:B (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756553 7z0w:B (2.06) BS03 ATR 1.-.-.- GO:0003955 ... P17117 35648111
    756554 7z0w:C (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756555 7z0w:C (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756556 7z0w:D (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756557 7z0w:D (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756558 7z0w:D (2.06) BS03 ATR 1.-.-.- GO:0003955 ... P17117 35648111
    756559 7z0w:E (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756560 7z0w:E (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756561 7z0w:F (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756562 7z0w:F (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756563 7z0w:G (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756564 7z0w:G (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756565 7z0w:H (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756566 7z0w:H (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    756567 7z10:a (3.87) BS01 CU 7.1.1.9 GO:0004129 ... P00401 35839926
    756568 7z10:a (3.87) BS02 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    756569 7z10:a (3.87) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    756570 7z10:b (3.87) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 35839926
    756571 7z10:b (3.87) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 35839926
    756572 7z10:d (3.87) BS01 ZN ? GO:0005740 ... P04037 35839926
    756573 7z11:A (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    756574 7z11:A (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756575 7z11:A (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756576 7z11:B (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    756577 7z11:B (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756578 7z11:B (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756579 7z11:B (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756580 7z11:C (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    756581 7z11:C (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756582 7z11:C (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756583 7z11:C (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756584 7z11:C (3.2) BS05 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756585 7z11:D (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    756586 7z11:D (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756587 7z11:D (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756588 7z11:D (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756589 7z11:E (3.2) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756590 7z11:F (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    756591 7z11:F (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756592 7z11:F (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    756593 7z13:2 (3.4) BS01 dna 3.6.4.12 GO:0003677 ... N/A 35705812
    756594 7z13:2 (3.4) BS02 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    756595 7z13:2 (3.4) BS03 ZN 3.6.4.12 GO:0003677 ... N/A 35705812
    756596 7z13:2 (3.4) BS04 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    756597 7z13:3 (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P24279 35705812
    756598 7z13:3 (3.4) BS02 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    756599 7z13:3 (3.4) BS03 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    756600 7z13:4 (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P30665 35705812

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).