SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    757001 7z34:m (3.8) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    757002 7z34:m (3.8) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757003 7z34:m (3.8) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757004 7z34:m (3.8) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757005 7z34:n (3.8) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    757006 7z34:n (3.8) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757007 7z34:n (3.8) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757008 7z34:n (3.8) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757009 7z34:n (3.8) BS05 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757010 7z34:o (3.8) BS01 rna ? GO:0002181 ... P05747 36097293
    757011 7z34:oC (3.8) BS01 rna N/A N/A N/A 36097293
    757012 7z34:p (3.8) BS01 rna ? GO:0002181 ... P0CX25 36097293
    757013 7z34:q (3.8) BS01 rna ? GO:0002181 ... P0CX27 36097293
    757014 7z34:r (3.8) BS01 rna ? GO:0000460 ... P40078 36097293
    757015 7z34:t (3.8) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    757016 7z34:t (3.8) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757017 7z34:t (3.8) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757018 7z34:t (3.8) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757019 7z34:u (3.8) BS01 rna ? GO:0001671 ... Q07915 36097293
    757020 7z34:v (3.8) BS01 rna ? GO:0000055 ... P38861 36097293
    757021 7z34:w (3.8) BS01 rna 3.6.4.10 GO:0005515 ... P32794 36097293
    757022 7z34:w (3.8) BS02 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    757023 7z34:w (3.8) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757024 7z34:w (3.8) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757025 7z34:w (3.8) BS05 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757026 7z34:x (3.8) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    757027 7z34:y (3.8) BS01 rna ? GO:0000054 ... Q12522 36097293
    757028 7z34:z (3.8) BS01 rna ? GO:0003674 ... P38202 36097293
    757029 7z36:A (2.8) BS01 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757030 7z36:A (2.8) BS02 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757031 7z36:A (2.8) BS03 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757032 7z36:A (2.8) BS04 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757033 7z36:B (2.8) BS01 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757034 7z36:B (2.8) BS02 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757035 7z36:B (2.8) BS03 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757036 7z36:B (2.8) BS04 ZN 2.3.2.27
    3.2.1.17
    GO:0003796 ... P00720
    Q13263
    36341546
    757037 7z37:AP1 (3.67) BS01 ATP ? GO:0001890 ... P08238 36055235
    757038 7z37:BP1 (3.67) BS01 ATP ? GO:0001890 ... P08238 36055235
    757039 7z38:A (3.16) BS01 ATP ? GO:0001890 ... P08238 36055235
    757040 7z38:B (3.16) BS01 ATP ? GO:0001890 ... P08238 36055235
    757041 7z39:A (1.6) BS01 ICQ 2.7.11.1 GO:0004672 ... P68400 36189718
    757042 7z3b:A (1.65) BS01 CU1 ? N/A A0A2W1KFF4 38170898
    757043 7z3b:B (1.65) BS01 CU1 ? N/A A0A2W1KFF4 38170898
    757044 7z3d:A (2.0) BS01 MN 1.17.4.1 GO:0004748 ... Q81G55 36083619
    757045 7z3d:A (2.0) BS02 MN 1.17.4.1 GO:0004748 ... Q81G55 36083619
    757046 7z3d:B (2.0) BS01 FMN ? GO:0000166 ... Q81G57 36083619
    757047 7z3e:A (2.0) BS01 MN 1.17.4.1 GO:0004748 ... Q81G55 36083619
    757048 7z3e:A (2.0) BS02 MN 1.17.4.1 GO:0004748 ... Q81G55 36083619
    757049 7z3e:B (2.0) BS01 FNR ? GO:0000166 ... Q81G57 36083619
    757050 7z3f:A (1.7) BS01 CU ? N/A A0A2W1KFF4 38170898
    757051 7z3f:B (1.7) BS01 CU ? N/A A0A2W1KFF4 38170898
    757052 7z3g:A (2.1) BS01 CU1 ? N/A B7JAQ5 38170898
    757053 7z3g:B (2.1) BS01 CU1 ? N/A B7JAQ5 38170898
    757054 7z3i:A (1.82) BS01 CU ? N/A B7JAQ5 38170898
    757055 7z3i:B (1.82) BS01 CU ? N/A B7JAQ5 38170898
    757056 7z3j:A (2.0) BS01 CA 3.1.4.11 GO:0004435 ... P10686 35749497
    757057 7z3j:A (2.0) BS02 CA 3.1.4.11 GO:0004435 ... P10686 35749497
    757058 7z3j:A (2.0) BS03 I3P 3.1.4.11 GO:0004435 ... P10686 35749497
    757059 7z3k:AAA (2.0) BS01 ZN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757060 7z3k:AAA (2.0) BS02 ZN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757061 7z3k:AAA (2.0) BS03 5JK 3.1.4.39 GO:0001953 ... Q64610 36640760
    757062 7z3k:AAA (2.0) BS04 CA 3.1.4.39 GO:0001953 ... Q64610 36640760
    757063 7z3k:AAA (2.0) BS05 IA0 3.1.4.39 GO:0001953 ... Q64610 36640760
    757064 7z3l:AAA (2.4) BS01 MAN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757065 7z3l:AAA (2.4) BS02 MAN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757066 7z3l:AAA (2.4) BS03 MAN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757067 7z3l:AAA (2.4) BS04 ZN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757068 7z3l:AAA (2.4) BS05 ZN 3.1.4.39 GO:0001953 ... Q64610 36640760
    757069 7z3l:AAA (2.4) BS06 CA 3.1.4.39 GO:0001953 ... Q64610 36640760
    757070 7z3l:AAA (2.4) BS07 7NB 3.1.4.39 GO:0001953 ... Q64610 36640760
    757071 7z3n:A (3.2) BS01 rna ? GO:0006417 ... G0S9U0 37081320
    757072 7z3n:B (3.2) BS01 rna ? GO:0003676 ... G0S428 37081320
    757073 7z3n:C (3.2) BS01 rna ? GO:0005515 ... G0RYD6 37081320
    757074 7z3n:C (3.2) BS02 rna ? GO:0005515 ... G0RYD6 37081320
    757075 7z3n:D (3.2) BS01 ATP ? GO:0005515 ... G0RZX9 37081320
    757076 7z3n:LA (3.2) BS01 rna ? GO:0002181 ... G0S4P8 37081320
    757077 7z3n:LB (3.2) BS01 rna ? GO:0003723 ... G0RXW1 37081320
    757078 7z3n:LB (3.2) BS02 MG ? GO:0003723 ... G0RXW1 37081320
    757079 7z3n:LC (3.2) BS01 rna ? GO:0003735 ... G0SFC3 37081320
    757080 7z3n:LC (3.2) BS02 rna ? GO:0003735 ... G0SFC3 37081320
    757081 7z3n:LD (3.2) BS01 rna ? GO:0000027 ... G0SEG2 37081320
    757082 7z3n:LD (3.2) BS02 rna ? GO:0000027 ... G0SEG2 37081320
    757083 7z3n:LE (3.2) BS01 rna ? GO:0000027 ... G0S0D6 37081320
    757084 7z3n:LF (3.2) BS01 rna ? GO:0000463 ... G0SFL0 37081320
    757085 7z3n:LF (3.2) BS02 rna ? GO:0000463 ... G0SFL0 37081320
    757086 7z3n:LG (3.2) BS01 rna ? GO:0003723 ... G0SAJ9 37081320
    757087 7z3n:LG (3.2) BS02 rna ? GO:0003723 ... G0SAJ9 37081320
    757088 7z3n:LH (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757089 7z3n:LI (3.2) BS01 rna ? GO:0003735 ... G0SEI1 37081320
    757090 7z3n:LI (3.2) BS02 rna ? GO:0003735 ... G0SEI1 37081320
    757091 7z3n:LJ (3.2) BS01 rna ? GO:0003735 ... G0SHQ2 37081320
    757092 7z3n:LJ (3.2) BS02 rna ? GO:0003735 ... G0SHQ2 37081320
    757093 7z3n:LK (3.2) BS01 rna ? GO:0003735 ... G0SGH8 37081320
    757094 7z3n:LL (3.2) BS01 rna ? GO:0003723 ... G0S992 37081320
    757095 7z3n:LM (3.2) BS01 rna ? GO:0003723 ... G0S1R0 37081320
    757096 7z3n:LN (3.2) BS01 rna ? GO:0002181 ... G0RZ88 37081320
    757097 7z3n:LN (3.2) BS02 rna ? GO:0002181 ... G0RZ88 37081320
    757098 7z3n:LO (3.2) BS01 rna ? GO:0003729 ... G0SH61 37081320
    757099 7z3n:LP (3.2) BS01 rna ? GO:0002181 ... G0SGY1 37081320
    757100 7z3n:LP (3.2) BS02 rna ? GO:0002181 ... G0SGY1 37081320
    757101 7z3n:LP (3.2) BS03 MG ? GO:0002181 ... G0SGY1 37081320
    757102 7z3n:LQ (3.2) BS01 rna ? GO:0003723 ... G0S9B5 37081320
    757103 7z3n:LR (3.2) BS01 rna ? GO:0003723 ... G0S9T3 37081320
    757104 7z3n:LR (3.2) BS02 rna ? GO:0003723 ... G0S9T3 37081320
    757105 7z3n:LS (3.2) BS01 rna ? GO:0003735 ... G0SCE2 37081320
    757106 7z3n:LS (3.2) BS02 rna ? GO:0003735 ... G0SCE2 37081320
    757107 7z3n:LT (3.2) BS01 rna ? GO:0003735 ... G0S0Z3 37081320
    757108 7z3n:LU (3.2) BS01 rna ? GO:0002181 ... G0SDS8 37081320
    757109 7z3n:LV (3.2) BS01 rna ? GO:0003735 ... G0SI44 37081320
    757110 7z3n:LW (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757111 7z3n:LW (3.2) BS02 rna N/A GO:0003735 ... N/A 37081320
    757112 7z3n:LX (3.2) BS01 rna ? GO:0003735 ... G0S507 37081320
    757113 7z3n:LX (3.2) BS02 rna ? GO:0003735 ... G0S507 37081320
    757114 7z3n:LY (3.2) BS01 rna ? GO:0003723 ... G0RYN9 37081320
    757115 7z3n:LY (3.2) BS02 rna ? GO:0003723 ... G0RYN9 37081320
    757116 7z3n:LZ (3.2) BS01 rna ? GO:0003735 ... G0RZE9 37081320
    757117 7z3n:La (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757118 7z3n:Lb (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757119 7z3n:Lc (3.2) BS01 rna ? GO:0003723 ... G0SEI0 37081320
    757120 7z3n:Ld (3.2) BS01 rna ? GO:0002181 ... G0SD68 37081320
    757121 7z3n:Le (3.2) BS01 rna ? GO:0003735 ... G0S6V4 37081320
    757122 7z3n:Lf (3.2) BS01 rna ? GO:0003735 ... G0SCL3 37081320
    757123 7z3n:Lg (3.2) BS01 rna ? GO:0003735 ... G0SFN0 37081320
    757124 7z3n:Lg (3.2) BS02 ZN ? GO:0003735 ... G0SFN0 37081320
    757125 7z3n:Lh (3.2) BS01 rna 2.4.99.18 GO:0000463 ... G0S0D7 37081320
    757126 7z3n:Lh (3.2) BS02 rna 2.4.99.18 GO:0000463 ... G0S0D7 37081320
    757127 7z3n:Li (3.2) BS01 rna ? GO:0003735 ... G0SBN1 37081320
    757128 7z3n:Lj (3.2) BS01 rna ? GO:0003723 ... G0S101 37081320
    757129 7z3n:Lj (3.2) BS02 rna ? GO:0003723 ... G0S101 37081320
    757130 7z3n:Lj (3.2) BS03 ZN ? GO:0003723 ... G0S101 37081320
    757131 7z3n:Lk (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757132 7z3n:Ll (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757133 7z3n:Ll (3.2) BS02 rna N/A GO:0003735 ... N/A 37081320
    757134 7z3n:Lm (3.2) BS01 rna ? GO:0003735 ... G0S8G4 37081320
    757135 7z3n:Lm (3.2) BS02 ZN ? GO:0003735 ... G0S8G4 37081320
    757136 7z3n:Lo (3.2) BS01 rna ? GO:0003735 ... G0SBZ6 37081320
    757137 7z3n:Lo (3.2) BS02 ZN ? GO:0003735 ... G0SBZ6 37081320
    757138 7z3n:Lp (3.2) BS01 rna ? GO:0003735 ... G0S6B0 37081320
    757139 7z3n:Lp (3.2) BS02 ZN ? GO:0003735 ... G0S6B0 37081320
    757140 7z3n:Lq (3.2) BS01 rna ? GO:0003735 ... G0SHJ6 37081320
    757141 7z3n:Ls (3.2) BS01 rna ? GO:0000027 ... G0SGP3 37081320
    757142 7z3n:SA (3.2) BS01 rna ? GO:0000028 ... G0RYF9 37081320
    757143 7z3n:SB (3.2) BS01 rna ? GO:0003735 ... G0S7T8 37081320
    757144 7z3n:SB (3.2) BS02 rna ? GO:0003735 ... G0S7T8 37081320
    757145 7z3n:SC (3.2) BS01 rna ? GO:0003723 ... G0SAV4 37081320
    757146 7z3n:SD (3.2) BS01 rna ? GO:0003723 ... G0S6I7 37081320
    757147 7z3n:SE (3.2) BS01 rna ? GO:0003723 ... G0S1A6 37081320
    757148 7z3n:SF (3.2) BS01 rna ? GO:0003723 ... G0S1Z0 37081320
    757149 7z3n:SG (3.2) BS01 rna ? GO:0003735 ... G0RY43 37081320
    757150 7z3n:SH (3.2) BS01 rna ? GO:0003735 ... G0S8C4 37081320
    757151 7z3n:SI (3.2) BS01 rna ? GO:0003735 ... G0RY45 37081320
    757152 7z3n:SI (3.2) BS02 rna ? GO:0003735 ... G0RY45 37081320
    757153 7z3n:SJ (3.2) BS01 rna ? GO:0003723 ... G0S0Z4 37081320
    757154 7z3n:SK (3.2) BS01 rna ? GO:0003723 ... G0RZD8 37081320
    757155 7z3n:SL (3.2) BS01 rna ? GO:0003735 ... G0SF00 37081320
    757156 7z3n:SM (3.2) BS01 rna ? GO:0003735 ... G0SHH9 37081320
    757157 7z3n:SN (3.2) BS01 rna ? GO:0003735 ... G0RZM9 37081320
    757158 7z3n:SO (3.2) BS01 rna ? GO:0003735 ... G0SFL1 37081320
    757159 7z3n:SO (3.2) BS02 MG ? GO:0003735 ... G0SFL1 37081320
    757160 7z3n:SP (3.2) BS01 rna ? GO:0000028 ... G0S084 37081320
    757161 7z3n:SQ (3.2) BS01 rna ? GO:0000462 ... G0SBR7 37081320
    757162 7z3n:SR (3.2) BS01 rna ? GO:0003735 ... G0S871 37081320
    757163 7z3n:SS (3.2) BS01 rna ? GO:0003676 ... G0S6J7 37081320
    757164 7z3n:ST (3.2) BS01 rna ? GO:0000028 ... G0SFK8 37081320
    757165 7z3n:SU (3.2) BS01 rna ? GO:0003723 ... G0S379 37081320
    757166 7z3n:SW (3.2) BS01 rna ? GO:0003735 ... G0SHI0 37081320
    757167 7z3n:SX (3.2) BS01 rna ? GO:0003735 ... G0RY17 37081320
    757168 7z3n:SY (3.2) BS01 rna ? GO:0003735 ... P0CU28 37081320
    757169 7z3n:SZ (3.2) BS01 rna ? GO:0005840 ... G0S1Y9 37081320
    757170 7z3n:Sa (3.2) BS01 rna ? GO:0003729 ... G0S2X4 37081320
    757171 7z3n:Sa (3.2) BS02 ZN ? GO:0003729 ... G0S2X4 37081320
    757172 7z3n:Sb (3.2) BS01 rna ? GO:0003735 ... G0S1S4 37081320
    757173 7z3n:Sc (3.2) BS01 rna ? GO:0000028 ... G0S9M9 37081320
    757174 7z3n:Sd (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757175 7z3n:Sd (3.2) BS02 ZN N/A GO:0003735 ... N/A 37081320
    757176 7z3n:Se (3.2) BS01 rna N/A GO:0003735 ... N/A 37081320
    757177 7z3n:Sf (3.2) BS01 rna ? GO:0003735 ... G0S2X5 37081320
    757178 7z3o:A (3.3) BS01 rna ? GO:0006417 ... G0S9U0 37081320
    757179 7z3o:B (3.3) BS01 rna ? GO:0003676 ... G0S428 37081320
    757180 7z3o:C (3.3) BS01 rna ? GO:0005515 ... G0RYD6 37081320
    757181 7z3o:C (3.3) BS02 rna ? GO:0005515 ... G0RYD6 37081320
    757182 7z3o:D (3.3) BS01 ATP ? GO:0005515 ... G0RZX9 37081320
    757183 7z3o:LA (3.3) BS01 rna ? GO:0002181 ... G0S4P8 37081320
    757184 7z3o:LB (3.3) BS01 rna ? GO:0003723 ... G0RXW1 37081320
    757185 7z3o:LB (3.3) BS02 MG ? GO:0003723 ... G0RXW1 37081320
    757186 7z3o:LC (3.3) BS01 rna ? GO:0003735 ... G0SFC3 37081320
    757187 7z3o:LC (3.3) BS02 rna ? GO:0003735 ... G0SFC3 37081320
    757188 7z3o:LD (3.3) BS01 rna ? GO:0000027 ... G0SEG2 37081320
    757189 7z3o:LD (3.3) BS02 rna ? GO:0000027 ... G0SEG2 37081320
    757190 7z3o:LE (3.3) BS01 rna ? GO:0000027 ... G0S0D6 37081320
    757191 7z3o:LF (3.3) BS01 rna ? GO:0000463 ... G0SFL0 37081320
    757192 7z3o:LG (3.3) BS01 rna ? GO:0003723 ... G0SAJ9 37081320
    757193 7z3o:LG (3.3) BS02 rna ? GO:0003723 ... G0SAJ9 37081320
    757194 7z3o:LH (3.3) BS01 rna N/A GO:0003735 ... N/A 37081320
    757195 7z3o:LI (3.3) BS01 rna ? GO:0003735 ... G0SEI1 37081320
    757196 7z3o:LI (3.3) BS02 rna ? GO:0003735 ... G0SEI1 37081320
    757197 7z3o:LJ (3.3) BS01 rna ? GO:0003735 ... G0SHQ2 37081320
    757198 7z3o:LJ (3.3) BS02 rna ? GO:0003735 ... G0SHQ2 37081320
    757199 7z3o:LK (3.3) BS01 rna ? GO:0003735 ... G0SGH8 37081320
    757200 7z3o:LL (3.3) BS01 rna ? GO:0003723 ... G0S992 37081320

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).