SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    757401 7z53:N (2.28) BS02 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757402 7z53:N (2.28) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    757403 7z53:O (2.28) BS01 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757404 7z53:P (2.28) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 36150500
    757405 7z53:P (2.28) BS02 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757406 7z53:P (2.28) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    757407 7z53:P (2.28) BS04 OXL 1.11.2.2 GO:0004601 ... P05164 36150500
    757408 7z53:S (2.28) BS01 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757409 7z53:T (2.28) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 36150500
    757410 7z53:T (2.28) BS02 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757411 7z53:T (2.28) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    757412 7z53:U (2.28) BS01 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757413 7z53:V (2.28) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 36150500
    757414 7z53:V (2.28) BS02 HEC 1.11.2.2 GO:0004601 ... P05164 36150500
    757415 7z53:V (2.28) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    757416 7z54:A (1.82) BS01 OYT ? GO:0003723 ... Q9Y5A9 36110386
    757417 7z54:B (1.82) BS01 OYT ? GO:0003723 ... Q9Y5A9 36110386
    757418 7z55:AAA (1.664) BS01 rna ? N/A F0NGX6 36271789
    757419 7z55:BBB (1.664) BS01 rna ? N/A F0NGX6 36271789
    757420 7z57:A (2.2) BS01 IGB ? GO:0003677 ... P02768 36148994
    757421 7z57:A (2.2) BS02 IGB ? GO:0003677 ... P02768 36148994
    757422 7z58:A (1.35) BS01 RN2 3.4.22.15 GO:0006508 ... P07711 37853179
    757423 7z58:B (1.35) BS01 RN2 3.4.22.15 GO:0006508 ... P07711 37853179
    757424 7z58:C (1.35) BS01 RN2 3.4.22.15 GO:0006508 ... P07711 37853179
    757425 7z58:D (1.35) BS01 RN2 3.4.22.15 GO:0006508 ... P07711 37853179
    757426 7z59:A (2.0) BS01 IFO 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 35549342
    757427 7z5a:A (2.28) BS01 dna 3.2.2.-
    4.2.99.18
    GO:0003676 ... Q8K203 36155818
    757428 7z5a:A (2.28) BS02 ZN 3.2.2.-
    4.2.99.18
    GO:0003676 ... Q8K203 36155818
    757429 7z5b:A (2.6) BS01 IFT 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757430 7z5b:B (2.6) BS01 IFT 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757431 7z5b:C (2.6) BS01 IFT 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757432 7z5h:A (2.5) BS01 ZN 3.4.17.17 N/A Q68EN5 35482892
    757433 7z5h:B (2.5) BS01 ZN 3.4.17.17 N/A Q68EN5 35482892
    757434 7z5h:C (2.5) BS01 ZN 3.4.17.17 N/A Q68EN5 35482892
    757435 7z5h:D (2.5) BS01 ZN 3.4.17.17 N/A Q68EN5 35482892
    757436 7z5i:A (3.0) BS01 dna ? GO:0006355 ... P13349 39753777
    757437 7z5i:A (3.0) BS02 dna ? GO:0006355 ... P13349 39753777
    757438 7z5i:B (3.0) BS01 dna ? GO:0006355 ... P13349 39753777
    757439 7z5i:B (3.0) BS02 dna ? GO:0006355 ... P13349 39753777
    757440 7z5j:A (2.58) BS01 IV9 ? GO:0005737 ... P84308 35779405
    757441 7z5j:A (2.58) BS02 ATP ? GO:0005737 ... P84308 35779405
    757442 7z5j:A (2.58) BS03 MG ? GO:0005737 ... P84308 35779405
    757443 7z5j:A (2.58) BS04 IWO ? GO:0005737 ... P84308 35779405
    757444 7z5j:A (2.58) BS05 IWZ ? GO:0005737 ... P84308 35779405
    757445 7z5j:A (2.58) BS06 IX3 ? GO:0005737 ... P84308 35779405
    757446 7z5j:B (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757447 7z5j:B (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757448 7z5j:B (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757449 7z5j:B (2.58) BS04 IV9 ? GO:0005737 ... P84253 35779405
    757450 7z5j:B (2.58) BS05 IHW ? GO:0005737 ... P84253 35779405
    757451 7z5j:C (2.58) BS01 IV9 ? GO:0005737 ... P84308 35779405
    757452 7z5j:C (2.58) BS02 ATP ? GO:0005737 ... P84308 35779405
    757453 7z5j:C (2.58) BS03 MG ? GO:0005737 ... P84308 35779405
    757454 7z5j:C (2.58) BS04 IWO ? GO:0005737 ... P84308 35779405
    757455 7z5j:C (2.58) BS05 IWZ ? GO:0005737 ... P84308 35779405
    757456 7z5j:C (2.58) BS06 IX3 ? GO:0005737 ... P84308 35779405
    757457 7z5j:D (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757458 7z5j:D (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757459 7z5j:D (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757460 7z5j:D (2.58) BS04 IV9 ? GO:0005737 ... P84253 35779405
    757461 7z5j:D (2.58) BS05 IHW ? GO:0005737 ... P84253 35779405
    757462 7z5j:E (2.58) BS01 IWZ ? GO:0005737 ... P84308 35779405
    757463 7z5j:E (2.58) BS02 IV9 ? GO:0005737 ... P84308 35779405
    757464 7z5j:E (2.58) BS03 ATP ? GO:0005737 ... P84308 35779405
    757465 7z5j:E (2.58) BS04 MG ? GO:0005737 ... P84308 35779405
    757466 7z5j:E (2.58) BS05 IWO ? GO:0005737 ... P84308 35779405
    757467 7z5j:E (2.58) BS06 IX3 ? GO:0005737 ... P84308 35779405
    757468 7z5j:F (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757469 7z5j:F (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757470 7z5j:F (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757471 7z5j:F (2.58) BS04 IHW ? GO:0005737 ... P84253 35779405
    757472 7z5j:F (2.58) BS05 IV9 ? GO:0005737 ... P84253 35779405
    757473 7z5j:G (2.58) BS01 IX3 ? GO:0005737 ... P84308 35779405
    757474 7z5j:G (2.58) BS02 IV9 ? GO:0005737 ... P84308 35779405
    757475 7z5j:G (2.58) BS03 ATP ? GO:0005737 ... P84308 35779405
    757476 7z5j:G (2.58) BS04 MG ? GO:0005737 ... P84308 35779405
    757477 7z5j:G (2.58) BS05 IWO ? GO:0005737 ... P84308 35779405
    757478 7z5j:G (2.58) BS06 IWZ ? GO:0005737 ... P84308 35779405
    757479 7z5j:H (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757480 7z5j:H (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757481 7z5j:H (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757482 7z5j:H (2.58) BS04 IV9 ? GO:0005737 ... P84253 35779405
    757483 7z5j:H (2.58) BS05 IHW ? GO:0005737 ... P84253 35779405
    757484 7z5j:I (2.58) BS01 IV9 ? GO:0005737 ... P84308 35779405
    757485 7z5j:I (2.58) BS02 ATP ? GO:0005737 ... P84308 35779405
    757486 7z5j:I (2.58) BS03 MG ? GO:0005737 ... P84308 35779405
    757487 7z5j:I (2.58) BS04 IWO ? GO:0005737 ... P84308 35779405
    757488 7z5j:I (2.58) BS05 IX3 ? GO:0005737 ... P84308 35779405
    757489 7z5j:I (2.58) BS06 IWZ ? GO:0005737 ... P84308 35779405
    757490 7z5j:J (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757491 7z5j:J (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757492 7z5j:J (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757493 7z5j:J (2.58) BS04 IV9 ? GO:0005737 ... P84253 35779405
    757494 7z5j:K (2.58) BS01 IX3 ? GO:0005737 ... P84308 35779405
    757495 7z5j:K (2.58) BS02 IV9 ? GO:0005737 ... P84308 35779405
    757496 7z5j:K (2.58) BS03 ATP ? GO:0005737 ... P84308 35779405
    757497 7z5j:K (2.58) BS04 MG ? GO:0005737 ... P84308 35779405
    757498 7z5j:K (2.58) BS05 IWO ? GO:0005737 ... P84308 35779405
    757499 7z5j:K (2.58) BS06 IWZ ? GO:0005737 ... P84308 35779405
    757500 7z5j:L (2.58) BS01 MOO ? GO:0005737 ... P84253 35779405
    757501 7z5j:L (2.58) BS02 ATP ? GO:0005737 ... P84253 35779405
    757502 7z5j:L (2.58) BS03 IWL ? GO:0005737 ... P84253 35779405
    757503 7z5j:L (2.58) BS04 IHW ? GO:0005737 ... P84253 35779405
    757504 7z5j:L (2.58) BS05 IV9 ? GO:0005737 ... P84253 35779405
    757505 7z5k:A (2.28) BS01 dna ? GO:0006355 ... P13349 39753777
    757506 7z5k:A (2.28) BS02 dna ? GO:0006355 ... P13349 39753777
    757507 7z5k:B (2.28) BS01 dna ? GO:0006355 ... P13349 39753777
    757508 7z5k:B (2.28) BS02 dna ? GO:0006355 ... P13349 39753777
    757509 7z5m:A (1.7) BS01 5ZK ? GO:0003723 ... Q9Y5A9 36110386
    757510 7z5m:B (1.7) BS01 5ZK ? GO:0003723 ... Q9Y5A9 36110386
    757511 7z5n:A (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757512 7z5n:B (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757513 7z5n:C (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757514 7z5n:D (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757515 7z5n:E (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757516 7z5n:F (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757517 7z5n:G (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757518 7z5n:H (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757519 7z5n:H (2.77) BS02 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    757520 7z5o:AAA (1.527) BS01 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    757521 7z5o:AAA (1.527) BS02 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    757522 7z5o:AAA (1.527) BS03 SF4 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    757523 7z5o:BBB (1.527) BS01 SF4 ? GO:0030313 ... Q72EJ0 35766974
    757524 7z5o:BBB (1.527) BS02 SF4 ? GO:0030313 ... Q72EJ0 35766974
    757525 7z5o:BBB (1.527) BS03 SF4 ? GO:0030313 ... Q72EJ0 35766974
    757526 7z5p:A (2.991) BS01 CU ? GO:0005507 ... A8FAG9 35624560
    757527 7z5p:A (2.991) BS02 CU ? GO:0005507 ... A8FAG9 35624560
    757528 7z5p:A (2.991) BS03 CU ? GO:0005507 ... A8FAG9 35624560
    757529 7z5p:A (2.991) BS04 CU ? GO:0005507 ... A8FAG9 35624560
    757530 7z5p:B (2.991) BS01 CU ? GO:0005507 ... A8FAG9 35624560
    757531 7z5p:B (2.991) BS02 CU ? GO:0005507 ... A8FAG9 35624560
    757532 7z5p:B (2.991) BS03 CU ? GO:0005507 ... A8FAG9 35624560
    757533 7z5p:B (2.991) BS04 CU ? GO:0005507 ... A8FAG9 35624560
    757534 7z5q:B (1.8) BS01 peptide ? GO:0005179 ... P01308 N/A
    757535 7z5r:A (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757536 7z5r:B (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757537 7z5r:C (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    757538 7z5s:BBB (2.1) BS01 GAL ? GO:0005576 ... K4GGE0 35622602
    757539 7z5s:BBB (2.1) BS02 SIA ? GO:0005576 ... K4GGE0 35622602
    757540 7z5u:A (1.8) BS01 ZN 3.4.24.3 GO:0004222 ... Q9X721 36154055
    757541 7z5u:A (1.8) BS02 IFW 3.4.24.3 GO:0004222 ... Q9X721 36154055
    757542 7z5u:A (1.8) BS03 CA 3.4.24.3 GO:0004222 ... Q9X721 36154055
    757543 7z5w:A (2.254) BS01 IDW 2.7.10.1 GO:0004672 ... P08922 35920716
    757544 7z5w:B (2.254) BS01 IDW 2.7.10.1 GO:0004672 ... P08922 35920716
    757545 7z5x:A (2.035) BS01 AWJ 2.7.10.1 GO:0004672 ... P08922 35920716
    757546 7z5x:B (2.035) BS01 AWJ 2.7.10.1 GO:0004672 ... P08922 35920716
    757547 7z5y:A (1.71) BS01 dna 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757548 7z5y:A (1.71) BS02 peptide 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757549 7z5y:A (1.71) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757550 7z5z:A (1.49) BS01 dna 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757551 7z5z:A (1.49) BS02 peptide 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757552 7z5z:A (1.49) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757553 7z60:B (1.4) BS01 J6O ? GO:0001523 ... P02766 N/A
    757554 7z61:A (2.738) BS01 IGJ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 35978693
    757555 7z62:AAA (1.53) BS01 CA ? GO:0005737 ... Q05097 36549118
    757556 7z62:AAA (1.53) BS02 IEC ? GO:0005737 ... Q05097 36549118
    757557 7z62:BBB (1.53) BS01 IEC ? GO:0005737 ... Q05097 36549118
    757558 7z62:BBB (1.53) BS02 CA ? GO:0005737 ... Q05097 36549118
    757559 7z63:AAA (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    757560 7z63:AAA (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    757561 7z63:BBB (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    757562 7z63:BBB (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    757563 7z63:CCC (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    757564 7z63:CCC (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    757565 7z63:DDD (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    757566 7z63:DDD (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    757567 7z67:A (2.65) BS01 ACP 3.6.1.1 GO:0005524 ... Q9C9B9 N/A
    757568 7z67:A (2.65) BS02 MG 3.6.1.1 GO:0005524 ... Q9C9B9 N/A
    757569 7z68:A (1.5) BS01 CA 3.4.24.26 GO:0004222 ... P14756 N/A
    757570 7z68:A (1.5) BS02 ZN 3.4.24.26 GO:0004222 ... P14756 N/A
    757571 7z68:A (1.5) BS03 IEV 3.4.24.26 GO:0004222 ... P14756 N/A
    757572 7z6a:A (1.66) BS01 peptide 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757573 7z6a:A (1.66) BS02 dna 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757574 7z6a:A (1.66) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757575 7z6c:A (1.85) BS01 FMN 1.3.5.2 GO:0004151 ... Q02127 36162075
    757576 7z6c:A (1.85) BS02 IEQ 1.3.5.2 GO:0004151 ... Q02127 36162075
    757577 7z6d:A (1.45) BS01 F3I 4.6.1.18 GO:0003676 ... P61823 N/A
    757578 7z6e:A (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    757579 7z6e:A (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    757580 7z6e:B (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    757581 7z6e:B (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    757582 7z6e:C (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    757583 7z6e:C (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    757584 7z6e:D (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    757585 7z6e:D (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    757586 7z6e:E (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    757587 7z6e:E (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    757588 7z6f:E (1.65) BS01 peptide ? GO:0006857 ... P33913 N/A
    757589 7z6g:A (1.71) BS01 F3I 4.6.1.18 GO:0003676 ... P61823 N/A
    757590 7z6h:D (3.59) BS01 AGS ? GO:0003677 ... P35249 35819203
    757591 7z6h:E (3.59) BS01 AGS ? GO:0000731 ... P40938 35819203
    757592 7z6h:F (3.59) BS01 dna ? GO:0003677 ... P35250 35819203
    757593 7z6h:F (3.59) BS02 AGS ? GO:0003677 ... P35250 35819203
    757594 7z6h:G (3.59) BS01 dna ? GO:0003677 ... P40937 35819203
    757595 7z6h:G (3.59) BS02 AGS ? GO:0003677 ... P40937 35819203
    757596 7z6h:K (3.59) BS01 dna 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    757597 7z6h:K (3.59) BS02 dna 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    757598 7z6h:K (3.59) BS03 AGS 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    757599 7z6i:AAA (2.25) BS01 IIM 2.7.11.24 GO:0000077 ... P47811 37308482
    757600 7z6i:AAA (2.25) BS02 87B 2.7.11.24 GO:0000077 ... P47811 37308482

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).