SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    757601 7z6k:A (1.6) BS01 dna 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757602 7z6k:A (1.6) BS02 peptide 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757603 7z6k:A (1.6) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757604 7z6k:A (1.6) BS04 MUB 2.3.2.10 GO:0008360 ... Q9EY50 36350642
    757605 7z6l:A (2.24) BS01 IEI 3.6.4.- GO:0006338 ... P51531 36216795
    757606 7z6l:B (2.24) BS01 IEI ? N/A P40337 36216795
    757607 7z6o:A (3.7) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    757608 7z6o:A (3.7) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    757609 7z6o:A (3.7) BS03 IHP 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    757610 7z6o:B (3.7) BS01 dna 3.6.4.- GO:0000723 ... P13010 37870477
    757611 7z6o:B (3.7) BS02 dna 3.6.4.- GO:0000723 ... P13010 37870477
    757612 7z6o:B (3.7) BS03 IHP 3.6.4.- GO:0000723 ... P13010 37870477
    757613 7z6q:A (2.5) BS01 GS0 ? GO:0009579 ... Q8KAY0 36693097
    757614 7z6q:A (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    757615 7z6q:A (2.5) BS03 CLA ? GO:0009579 ... Q8KAY0 36693097
    757616 7z6q:A (2.5) BS04 BCL ? GO:0009579 ... Q8KAY0 36693097
    757617 7z6q:A (2.5) BS05 BCL ? GO:0009579 ... Q8KAY0 36693097
    757618 7z6q:A (2.5) BS06 BCL ? GO:0009579 ... Q8KAY0 36693097
    757619 7z6q:A (2.5) BS07 BCL ? GO:0009579 ... Q8KAY0 36693097
    757620 7z6q:A (2.5) BS08 BCL ? GO:0009579 ... Q8KAY0 36693097
    757621 7z6q:A (2.5) BS09 BCL ? GO:0009579 ... Q8KAY0 36693097
    757622 7z6q:A (2.5) BS10 BCL ? GO:0009579 ... Q8KAY0 36693097
    757623 7z6q:A (2.5) BS11 BCL ? GO:0009579 ... Q8KAY0 36693097
    757624 7z6q:A (2.5) BS12 BCL ? GO:0009579 ... Q8KAY0 36693097
    757625 7z6q:A (2.5) BS13 BCL ? GO:0009579 ... Q8KAY0 36693097
    757626 7z6q:A (2.5) BS14 BCL ? GO:0009579 ... Q8KAY0 36693097
    757627 7z6q:A (2.5) BS15 BCL ? GO:0009579 ... Q8KAY0 36693097
    757628 7z6q:A (2.5) BS16 F39 ? GO:0009579 ... Q8KAY0 36693097
    757629 7z6q:A (2.5) BS17 IKV ? GO:0009579 ... Q8KAY0 36693097
    757630 7z6q:A (2.5) BS18 CA ? GO:0009579 ... Q8KAY0 36693097
    757631 7z6q:A (2.5) BS19 SF4 ? GO:0009579 ... Q8KAY0 36693097
    757632 7z6q:A (2.5) BS20 CLA ? GO:0009579 ... Q8KAY0 36693097
    757633 7z6q:A (2.5) BS21 CLA ? GO:0009579 ... Q8KAY0 36693097
    757634 7z6q:A (2.5) BS22 BCL ? GO:0009579 ... Q8KAY0 36693097
    757635 7z6q:B (2.5) BS01 SF4 ? GO:0046872 ... Q8KAY1 36693097
    757636 7z6q:B (2.5) BS02 SF4 ? GO:0046872 ... Q8KAY1 36693097
    757637 7z6q:C (2.5) BS01 CLA ? GO:0005886 ... O07091 36693097
    757638 7z6q:C (2.5) BS02 BCL ? GO:0005886 ... O07091 36693097
    757639 7z6q:E (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757640 7z6q:E (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757641 7z6q:E (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757642 7z6q:E (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757643 7z6q:E (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757644 7z6q:E (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757645 7z6q:E (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757646 7z6q:E (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757647 7z6q:E (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757648 7z6q:E (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757649 7z6q:F (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757650 7z6q:F (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757651 7z6q:F (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757652 7z6q:F (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757653 7z6q:F (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757654 7z6q:F (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757655 7z6q:F (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757656 7z6q:F (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757657 7z6q:F (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757658 7z6q:F (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757659 7z6q:G (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757660 7z6q:G (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757661 7z6q:G (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757662 7z6q:G (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757663 7z6q:G (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757664 7z6q:G (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757665 7z6q:G (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757666 7z6q:G (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757667 7z6q:G (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757668 7z6q:G (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757669 7z6q:G (2.5) BS11 BCL ? GO:0015979 ... Q46393 36693097
    757670 7z6q:H (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757671 7z6q:H (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757672 7z6q:H (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757673 7z6q:H (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757674 7z6q:H (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757675 7z6q:H (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757676 7z6q:H (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757677 7z6q:H (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757678 7z6q:H (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757679 7z6q:H (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757680 7z6q:I (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757681 7z6q:I (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757682 7z6q:I (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757683 7z6q:I (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757684 7z6q:I (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757685 7z6q:I (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757686 7z6q:I (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757687 7z6q:I (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757688 7z6q:I (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757689 7z6q:I (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757690 7z6q:J (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    757691 7z6q:J (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    757692 7z6q:J (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    757693 7z6q:J (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    757694 7z6q:J (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    757695 7z6q:J (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    757696 7z6q:J (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    757697 7z6q:J (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    757698 7z6q:J (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    757699 7z6q:J (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    757700 7z6q:J (2.5) BS11 BCL ? GO:0015979 ... Q46393 36693097
    757701 7z6q:a (2.5) BS01 CLA ? GO:0009579 ... Q8KAY0 36693097
    757702 7z6q:a (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    757703 7z6q:a (2.5) BS03 SF4 ? GO:0009579 ... Q8KAY0 36693097
    757704 7z6q:a (2.5) BS04 GS0 ? GO:0009579 ... Q8KAY0 36693097
    757705 7z6q:a (2.5) BS05 CLA ? GO:0009579 ... Q8KAY0 36693097
    757706 7z6q:a (2.5) BS06 CLA ? GO:0009579 ... Q8KAY0 36693097
    757707 7z6q:a (2.5) BS07 BCL ? GO:0009579 ... Q8KAY0 36693097
    757708 7z6q:a (2.5) BS08 BCL ? GO:0009579 ... Q8KAY0 36693097
    757709 7z6q:a (2.5) BS09 BCL ? GO:0009579 ... Q8KAY0 36693097
    757710 7z6q:a (2.5) BS10 BCL ? GO:0009579 ... Q8KAY0 36693097
    757711 7z6q:a (2.5) BS11 BCL ? GO:0009579 ... Q8KAY0 36693097
    757712 7z6q:a (2.5) BS12 BCL ? GO:0009579 ... Q8KAY0 36693097
    757713 7z6q:a (2.5) BS13 BCL ? GO:0009579 ... Q8KAY0 36693097
    757714 7z6q:a (2.5) BS14 BCL ? GO:0009579 ... Q8KAY0 36693097
    757715 7z6q:a (2.5) BS15 BCL ? GO:0009579 ... Q8KAY0 36693097
    757716 7z6q:a (2.5) BS16 BCL ? GO:0009579 ... Q8KAY0 36693097
    757717 7z6q:a (2.5) BS17 BCL ? GO:0009579 ... Q8KAY0 36693097
    757718 7z6q:a (2.5) BS18 BCL ? GO:0009579 ... Q8KAY0 36693097
    757719 7z6q:a (2.5) BS19 F39 ? GO:0009579 ... Q8KAY0 36693097
    757720 7z6q:a (2.5) BS20 IKV ? GO:0009579 ... Q8KAY0 36693097
    757721 7z6q:a (2.5) BS21 CA ? GO:0009579 ... Q8KAY0 36693097
    757722 7z6q:c (2.5) BS01 CLA ? GO:0005886 ... O07091 36693097
    757723 7z6q:c (2.5) BS02 BCL ? GO:0005886 ... O07091 36693097
    757724 7z6r:C (2.55) BS01 ATP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    757725 7z6r:C (2.55) BS02 PRP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    757726 7z6r:D (2.55) BS01 PRP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    757727 7z6r:D (2.55) BS02 ATP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    757728 7z6s:A (2.9) BS01 GTP 3.6.5.- GO:0000226 ... P68363 35482892
    757729 7z6s:B (2.9) BS01 GDP ? GO:0000226 ... Q13509 35482892
    757730 7z6s:C (2.9) BS01 ZN 3.4.17.17 GO:0004180 ... Q68EN5 35482892
    757731 7z6s:E (2.9) BS01 ZN 3.4.17.17 GO:0004180 ... Q68EN5 35482892
    757732 7z6s:H (2.9) BS01 GDP ? GO:0000226 ... Q13509 35482892
    757733 7z6s:K (2.9) BS01 GTP 3.6.5.- GO:0000226 ... P68363 35482892
    757734 7z6t:AAA (1.51) BS01 ZN 3.4.24.- GO:0004222 ... A1C4M2 N/A
    757735 7z6t:AAA (1.51) BS02 CA 3.4.24.- GO:0004222 ... A1C4M2 N/A
    757736 7z6u:A (2.28) BS01 peptide 2.7.11.1 GO:0004672 ... P11309 36410167
    757737 7z6u:A (2.28) BS02 IJB 2.7.11.1 GO:0004672 ... P11309 36410167
    757738 7z6w:A (1.84) BS01 IG7 ? GO:0005515 ... P61316 36037338
    757739 7z6x:A (2.06) BS01 IG7 ? GO:0005515 ... P61316 36037338
    757740 7z6z:A (1.75) BS01 KS8 3.4.15.1 GO:0006508 ... P12821 35653492
    757741 7z6z:A (1.75) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 35653492
    757742 7z6z:A (1.75) BS03 CA 3.4.15.1 GO:0006508 ... P12821 35653492
    757743 7z6z:B (1.75) BS01 FUC 3.4.15.1 GO:0006508 ... P12821 35653492
    757744 7z6z:B (1.75) BS02 KS8 3.4.15.1 GO:0006508 ... P12821 35653492
    757745 7z6z:B (1.75) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35653492
    757746 7z6z:B (1.75) BS04 CA 3.4.15.1 GO:0006508 ... P12821 35653492
    757747 7z70:A (1.85) BS01 FUC 3.4.15.1 GO:0006508 ... P12821 35653492
    757748 7z70:A (1.85) BS02 KS8 3.4.15.1 GO:0006508 ... P12821 35653492
    757749 7z70:A (1.85) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35653492
    757750 7z71:A (1.85) BS01 ZN ? GO:0000976 ... Q9H3D4 35717504
    757751 7z71:C (1.85) BS01 ZN ? GO:0000976 ... Q9H3D4 35717504
    757752 7z74:A (2.5) BS01 IKC 2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... Q61194 36109648
    757753 7z75:A (2.59) BS01 IG3 2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... Q61194 36109648
    757754 7z76:C (1.32) BS01 IFJ ? N/A P40337 36216795
    757755 7z76:D (1.32) BS01 IFJ 3.6.4.- GO:0006338 ... P51531 36216795
    757756 7z77:C (1.97) BS01 IFF ? N/A P40337 36216795
    757757 7z77:D (1.97) BS01 IFF 3.6.4.- GO:0006338 ... P51531 36216795
    757758 7z78:A (1.32) BS01 IF8 3.6.4.- GO:0006338 ... P51531 36216795
    757759 7z78:B (1.32) BS01 IF8 3.6.4.- GO:0006338 ... P51531 36216795
    757760 7z78:C (1.32) BS01 IF8 3.6.4.- GO:0006338 ... P51531 36216795
    757761 7z79:A (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757762 7z79:B (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757763 7z79:C (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757764 7z79:D (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757765 7z79:E (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757766 7z79:F (2.3) BS01 PLP ? GO:0003824 ... T1XIY1 N/A
    757767 7z7b:A (1.8) BS01 OYK ? GO:0003723 ... Q9Y5A9 36110386
    757768 7z7b:B (1.8) BS01 OYK ? GO:0003723 ... Q9Y5A9 36110386
    757769 7z7c:A (1.22) BS01 peptide N/A N/A N/A 37605043
    757770 7z7c:A (1.22) BS02 GLY N/A N/A N/A 37605043
    757771 7z7d:A (2.0) BS01 GTP 3.6.5.- GO:0000226 ... P81947 35404502
    757772 7z7d:A (2.0) BS02 CA 3.6.5.- GO:0000226 ... P81947 35404502
    757773 7z7d:B (2.0) BS01 GDP ? GO:0000226 ... Q6B856 35404502
    757774 7z7d:B (2.0) BS02 VLB ? GO:0000226 ... Q6B856 35404502
    757775 7z7d:B (2.0) BS03 4I2 ? GO:0000226 ... Q6B856 35404502
    757776 7z7d:C (2.0) BS01 VLB 3.6.5.- GO:0000226 ... P81947 35404502
    757777 7z7d:C (2.0) BS02 GTP 3.6.5.- GO:0000226 ... P81947 35404502
    757778 7z7d:C (2.0) BS03 CA 3.6.5.- GO:0000226 ... P81947 35404502
    757779 7z7d:C (2.0) BS04 4I2 3.6.5.- GO:0000226 ... P81947 35404502
    757780 7z7d:D (2.0) BS01 GDP ? GO:0000226 ... Q6B856 35404502
    757781 7z7d:F (2.0) BS01 ACP N/A GO:0036211 ... N/A 35404502
    757782 7z7e:A (1.8) BS01 ZN ? GO:0000976 ... Q9H3D4 35717504
    757783 7z7f:A (1.95) BS01 IF3 ? GO:0003723 ... Q9Y5A9 36110386
    757784 7z7h:A (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757785 7z7h:B (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757786 7z7h:C (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757787 7z7h:D (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757788 7z7h:E (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757789 7z7h:F (3.8) BS01 APR ? GO:0005515 ... P0AEX9
    Q8GF97
    35858890
    757790 7z7h:F (3.8) BS02 NCA ? GO:0005515 ... P0AEX9
    Q8GF97
    35858890
    757791 7z7i:A (3.5) BS01 APR 3.6.4.- GO:0000287 ... P68135 35858890
    757792 7z7i:A (3.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757793 7z7i:A (3.5) BS03 APR 3.6.4.- GO:0000287 ... P68135 35858890
    757794 7z7i:B (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757795 7z7i:B (3.5) BS02 APR 3.6.4.- GO:0000287 ... P68135 35858890
    757796 7z7i:C (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757797 7z7i:C (3.5) BS02 APR 3.6.4.- GO:0000287 ... P68135 35858890
    757798 7z7i:D (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    757799 7z7i:D (3.5) BS02 APR 3.6.4.- GO:0000287 ... P68135 35858890
    757800 7z7i:E (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).