SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    758001 7z8q:d (4.08) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    758002 7z8r:R (2.7) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758003 7z8r:R (2.7) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758004 7z8r:R (2.7) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758005 7z8s:E (3.9) BS01 dna ? GO:0003677 ... G0S6C0 37106137
    758006 7z8s:E (3.9) BS02 dna ? GO:0003677 ... G0S6C0 37106137
    758007 7z8t:R (3.0) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758008 7z8t:R (3.0) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758009 7z8t:R (3.0) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758010 7z8u:A (2.0) BS01 PRP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    758011 7z8u:A (2.0) BS02 ATP 2.4.2.17 GO:0000105 ... Q4FQF7 36494361
    758012 7z8v:R (2.7) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758013 7z8v:R (2.7) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758014 7z8v:R (2.7) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758015 7z8w:A (1.9) BS01 IHR ? GO:0003723 ... Q9Y5A9 36110386
    758016 7z8w:B (1.9) BS01 IHR ? GO:0003723 ... Q9Y5A9 36110386
    758017 7z8w:B (1.9) BS02 IHR ? GO:0003723 ... Q9Y5A9 36110386
    758018 7z8x:A (1.96) BS01 IGX ? GO:0003723 ... Q9Y5A9 36110386
    758019 7z8y:A (2.29) BS01 peptide ? N/A O94901 38291267
    758020 7z8y:B (2.29) BS01 peptide ? N/A O94901 38291267
    758021 7z8y:C (2.29) BS01 peptide ? N/A O94901 38291267
    758022 7z92:A (1.91) BS01 IGT ? GO:0003723 ... Q9Y5A9 36110386
    758023 7z92:B (1.91) BS01 IGT ? GO:0003723 ... Q9Y5A9 36110386
    758024 7z93:A (1.97) BS01 IHF ? GO:0003723 ... Q9Y5A9 36110386
    758025 7z93:B (1.97) BS01 IHF ? GO:0003723 ... Q9Y5A9 36110386
    758026 7z94:A (1.74) BS01 FAD ? GO:0000166 ... E6V140 36762980
    758027 7z94:A (1.74) BS02 IND ? GO:0000166 ... E6V140 36762980
    758028 7z94:A (1.74) BS03 IND ? GO:0000166 ... E6V140 36762980
    758029 7z94:A (1.74) BS04 IND ? GO:0000166 ... E6V140 36762980
    758030 7z94:A (1.74) BS05 IND ? GO:0000166 ... E6V140 36762980
    758031 7z94:A (1.74) BS06 IND ? GO:0000166 ... E6V140 36762980
    758032 7z94:A (1.74) BS07 IND ? GO:0000166 ... E6V140 36762980
    758033 7z94:A (1.74) BS08 IND ? GO:0000166 ... E6V140 36762980
    758034 7z97:A (1.46) BS01 FAD ? GO:0000166 ... E6V140 36762980
    758035 7z97:A (1.46) BS02 FK1 ? GO:0000166 ... E6V140 36762980
    758036 7z98:A (1.73) BS01 FAD ? GO:0000166 ... E6V140 36762980
    758037 7z98:A (1.73) BS02 16R ? GO:0000166 ... E6V140 36762980
    758038 7z99:A (1.92) BS01 FAD ? GO:0000166 ... E6V140 36762980
    758039 7z99:A (1.92) BS02 IH0 ? GO:0000166 ... E6V140 36762980
    758040 7z99:A (1.92) BS03 IH0 ? GO:0000166 ... E6V140 36762980
    758041 7z9c:A (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758042 7z9c:A (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758043 7z9c:B (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758044 7z9c:B (3.06) BS02 BWH 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758045 7z9c:C (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758046 7z9c:C (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758047 7z9c:C (3.06) BS03 BWH 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758048 7z9c:D (3.06) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758049 7z9c:D (3.06) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758050 7z9d:A (1.88) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 35906527
    758051 7z9e:A (1.48) BS01 LBV 2.7.13.3 GO:0006355 ... Q9RZA4 35906527
    758052 7z9f:A (1.7) BS01 CA 3.4.21.4 GO:0004252 ... P07478 35775010
    758053 7z9f:X (1.7) BS01 CA 3.4.21.4 GO:0004252 ... P07478 35775010
    758054 7z9g:A (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758055 7z9g:A (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758056 7z9g:A (3.25) BS03 IM0 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758057 7z9g:B (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758058 7z9g:C (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758059 7z9g:C (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758060 7z9g:C (3.25) BS03 IM0 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758061 7z9g:D (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758062 7z9g:D (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758063 7z9h:AAA (1.34) BS01 IIV 3.6.1.- N/A Q6PL18 36367089
    758064 7z9i:AAA (1.5) BS01 IJR 3.6.1.- N/A Q6PL18 36367089
    758065 7z9j:AAA (1.9) BS01 IIY 3.6.1.- N/A Q6PL18 36367089
    758066 7z9k:A (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758067 7z9k:A (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758068 7z9k:A (3.25) BS03 IL1 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758069 7z9k:B (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758070 7z9k:B (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758071 7z9k:B (3.25) BS03 IL1 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758072 7z9k:C (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758073 7z9k:C (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758074 7z9k:C (3.25) BS03 IL1 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758075 7z9k:D (3.25) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758076 7z9k:D (3.25) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758077 7z9m:A (3.3) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758078 7z9m:A (3.3) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758079 7z9m:A (3.3) BS03 IL1 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758080 7z9m:B (3.3) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758081 7z9m:B (3.3) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758082 7z9m:C (3.3) BS01 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758083 7z9m:C (3.3) BS02 dna 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758084 7z9m:C (3.3) BS03 IL1 5.6.2.2 GO:0003677 ... P0AES4 36741192
    758085 7z9m:D (3.3) BS01 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758086 7z9m:D (3.3) BS02 dna 5.6.2.2 GO:0003677 ... P0AES6 36741192
    758087 7z9n:AAA (1.34) BS01 IJ3 3.6.1.- N/A Q6PL18 36367089
    758088 7z9o:AAA (1.47) BS01 IK3 3.6.1.- N/A Q6PL18 36367089
    758089 7z9s:AAA (1.5) BS01 IJI 3.6.1.- N/A Q6PL18 36367089
    758090 7z9t:AAA (2.6) BS01 87B 2.7.11.24 GO:0000077 ... P47811 37308482
    758091 7z9t:BBB (2.6) BS01 87B 2.7.11.24 GO:0000077 ... P47811 37308482
    758092 7z9t:BBB (2.6) BS02 ATP 2.7.11.24 GO:0000077 ... P47811 37308482
    758093 7z9u:AAA (1.76) BS01 ARG 3.6.1.- N/A Q6PL18 36367089
    758094 7z9u:AAA (1.76) BS02 8WS 3.6.1.- N/A Q6PL18 36367089
    758095 7z9v:A (1.9) BS01 GZ6 2.7.7.15 GO:0003824 ... Q8IEE9 N/A
    758096 7z9v:A (1.9) BS02 IJ8 2.7.7.15 GO:0003824 ... Q8IEE9 N/A
    758097 7z9v:A (1.9) BS03 IJ8 2.7.7.15 GO:0003824 ... Q8IEE9 N/A
    758098 7z9w:AAA (0.988) BS01 BYZ ? N/A O60885 36367089
    758099 7z9y:AAA (1.04) BS01 PYZ ? N/A O60885 36367089
    758100 7z9y:AAA (1.04) BS02 PYZ ? N/A O60885 36367089
    758101 7z9z:AAA (2.5) BS01 PX9 ? GO:0005515 ... P02754 37610054
    758102 7za0:AAA (2.1) BS01 PX9 ? GO:0005515 ... P02754 37610054
    758103 7za1:E (4.1) BS01 MAN ? N/A F1LW30 36240740
    758104 7za1:F (4.1) BS01 MAN ? N/A F1LW30 36240740
    758105 7za1:H (4.1) BS01 MAN ? N/A F1LW30 36240740
    758106 7za2:E (4.6) BS01 MAN ? N/A F1LW30 36240740
    758107 7za2:G (4.6) BS01 MAN ? N/A F1LW30 36240740
    758108 7za3:E (4.0) BS01 MAN ? N/A F1LW30 36240740
    758109 7za3:G (4.0) BS01 MAN ? N/A F1LW30 36240740
    758110 7za6:AAA (1.12) BS01 HEW ? N/A O60885 36367089
    758111 7za7:AAA (1.06) BS01 IIS ? N/A O60885 36367089
    758112 7za7:AAA (1.06) BS02 IIS ? N/A O60885 36367089
    758113 7za8:AAA (1.04) BS01 HGQ ? N/A O60885 36367089
    758114 7za9:AAA (1.05) BS01 HHQ ? N/A O60885 36367089
    758115 7zaa:AAA (1.15) BS01 IJX ? N/A O60885 36367089
    758116 7zad:AAA (1.07) BS01 IJL ? N/A O60885 36367089
    758117 7zae:AAA (1.1) BS01 IJO ? N/A O60885 36367089
    758118 7zag:0 (2.77) BS01 rna ? GO:0005840 ... Q8U232 35694843
    758119 7zag:3 (2.77) BS01 rna ? GO:0001682 ... P62008 35694843
    758120 7zag:6 (2.77) BS01 rna ? GO:0003723 ... Q9V138 35694843
    758121 7zag:7 (2.77) BS01 rna ? GO:0003743 ... Q9UZK7 35694843
    758122 7zag:7 (2.77) BS02 MET ? GO:0003743 ... Q9UZK7 35694843
    758123 7zag:A (2.77) BS01 rna ? GO:0003735 ... Q9V2K7 35694843
    758124 7zag:B (2.77) BS01 rna ? GO:0003735 ... Q9V191 35694843
    758125 7zag:C (2.77) BS01 ZN ? N/A G8ZFK7 35694843
    758126 7zag:C (2.77) BS02 ZN ? N/A G8ZFK7 35694843
    758127 7zag:D (2.77) BS01 rna ? GO:0003723 ... P61992 35694843
    758128 7zag:E (2.77) BS01 rna ? GO:0003723 ... Q9V1U8 35694843
    758129 7zag:F (2.77) BS01 rna ? GO:0003723 ... Q9V1V5 35694843
    758130 7zag:F (2.77) BS02 ZN ? GO:0003723 ... Q9V1V5 35694843
    758131 7zag:G (2.77) BS01 rna ? GO:0003735 ... Q9UYS3 35694843
    758132 7zag:H (2.77) BS01 rna ? GO:0003735 ... Q9V109 35694843
    758133 7zag:H (2.77) BS02 rna ? GO:0003735 ... Q9V109 35694843
    758134 7zag:I (2.77) BS01 rna ? GO:0003735 ... Q9V1V0 35694843
    758135 7zag:J (2.77) BS01 rna ? GO:0003735 ... Q9UZL4 35694843
    758136 7zag:K (2.77) BS01 rna ? GO:0000462 ... Q9V195 35694843
    758137 7zag:L (2.77) BS01 rna ? GO:0000049 ... Q9V0V6 35694843
    758138 7zag:M (2.77) BS01 rna ? GO:0003735 ... P62010 35694843
    758139 7zag:N (2.77) BS01 rna ? GO:0003735 ... P61994 35694843
    758140 7zag:O (2.77) BS01 rna ? GO:0003676 ... Q9V1A0 35694843
    758141 7zag:P (2.77) BS01 rna ? GO:0002181 ... P62012 35694843
    758142 7zag:P (2.77) BS02 ZN ? GO:0002181 ... P62012 35694843
    758143 7zag:Q (2.77) BS01 rna ? GO:0003735 ... Q9V2K9 35694843
    758144 7zag:R (2.77) BS01 rna ? GO:0003735 ... Q9V1U5 35694843
    758145 7zag:R (2.77) BS02 ZN ? GO:0003735 ... Q9V1U5 35694843
    758146 7zag:S (2.77) BS01 rna ? GO:0003735 ... Q9V0G0 35694843
    758147 7zag:T (2.77) BS01 rna ? GO:0000028 ... Q9V1T9 35694843
    758148 7zag:U (2.77) BS01 rna ? GO:0000028 ... Q9V0G8 35694843
    758149 7zag:V (2.77) BS01 rna ? GO:0003735 ... Q9UY20 35694843
    758150 7zag:W (2.77) BS01 rna ? GO:0003735 ... Q9UXZ3 35694843
    758151 7zag:W (2.77) BS02 ZN ? GO:0003735 ... Q9UXZ3 35694843
    758152 7zag:X (2.77) BS01 rna ? GO:0000028 ... P61029 35694843
    758153 7zag:Y (2.77) BS01 rna ? GO:0003735 ... P61238 35694843
    758154 7zag:Z (2.77) BS01 rna ? GO:0003676 ... Q9V1U1 35694843
    758155 7zah:0 (2.7) BS01 rna ? GO:0005840 ... Q8U232 35694843
    758156 7zah:3 (2.7) BS01 rna ? GO:0001682 ... P62008 35694843
    758157 7zah:6 (2.7) BS01 rna ? GO:0003723 ... Q9V138 35694843
    758158 7zah:7 (2.7) BS01 rna ? GO:0003743 ... Q9UZK7 35694843
    758159 7zah:7 (2.7) BS02 rna ? GO:0003743 ... Q9UZK7 35694843
    758160 7zah:7 (2.7) BS03 MET ? GO:0003743 ... Q9UZK7 35694843
    758161 7zah:7 (2.7) BS04 GNP ? GO:0003743 ... Q9UZK7 35694843
    758162 7zah:7 (2.7) BS05 MG ? GO:0003743 ... Q9UZK7 35694843
    758163 7zah:A (2.7) BS01 rna ? GO:0003735 ... Q9V2K7 35694843
    758164 7zah:B (2.7) BS01 rna ? GO:0003735 ... Q9V191 35694843
    758165 7zah:C (2.7) BS01 ZN ? N/A G8ZFK7 35694843
    758166 7zah:C (2.7) BS02 ZN ? N/A G8ZFK7 35694843
    758167 7zah:D (2.7) BS01 rna ? GO:0003723 ... P61992 35694843
    758168 7zah:E (2.7) BS01 rna ? GO:0003723 ... Q9V1U8 35694843
    758169 7zah:F (2.7) BS01 rna ? GO:0003723 ... Q9V1V5 35694843
    758170 7zah:F (2.7) BS02 ZN ? GO:0003723 ... Q9V1V5 35694843
    758171 7zah:G (2.7) BS01 rna ? GO:0003735 ... Q9UYS3 35694843
    758172 7zah:H (2.7) BS01 rna ? GO:0003735 ... Q9V109 35694843
    758173 7zah:H (2.7) BS02 rna ? GO:0003735 ... Q9V109 35694843
    758174 7zah:I (2.7) BS01 rna ? GO:0003735 ... Q9V1V0 35694843
    758175 7zah:J (2.7) BS01 rna ? GO:0003735 ... Q9UZL4 35694843
    758176 7zah:K (2.7) BS01 rna ? GO:0000462 ... Q9V195 35694843
    758177 7zah:L (2.7) BS01 rna ? GO:0000049 ... Q9V0V6 35694843
    758178 7zah:M (2.7) BS01 rna ? GO:0003735 ... P62010 35694843
    758179 7zah:N (2.7) BS01 rna ? GO:0003735 ... P61994 35694843
    758180 7zah:O (2.7) BS01 rna ? GO:0003676 ... Q9V1A0 35694843
    758181 7zah:P (2.7) BS01 rna ? GO:0002181 ... P62012 35694843
    758182 7zah:P (2.7) BS02 ZN ? GO:0002181 ... P62012 35694843
    758183 7zah:Q (2.7) BS01 rna ? GO:0003735 ... Q9V2K9 35694843
    758184 7zah:R (2.7) BS01 rna ? GO:0003735 ... Q9V1U5 35694843
    758185 7zah:R (2.7) BS02 ZN ? GO:0003735 ... Q9V1U5 35694843
    758186 7zah:S (2.7) BS01 rna ? GO:0003735 ... Q9V0G0 35694843
    758187 7zah:T (2.7) BS01 rna ? GO:0000028 ... Q9V1T9 35694843
    758188 7zah:U (2.7) BS01 rna ? GO:0000028 ... Q9V0G8 35694843
    758189 7zah:V (2.7) BS01 rna ? GO:0003735 ... Q9UY20 35694843
    758190 7zah:W (2.7) BS01 rna ? GO:0003735 ... Q9UXZ3 35694843
    758191 7zah:W (2.7) BS02 ZN ? GO:0003735 ... Q9UXZ3 35694843
    758192 7zah:X (2.7) BS01 rna ? GO:0000028 ... P61029 35694843
    758193 7zah:Y (2.7) BS01 rna ? GO:0003735 ... P61238 35694843
    758194 7zah:Z (2.7) BS01 rna ? GO:0003676 ... Q9V1U1 35694843
    758195 7zai:0 (2.6) BS01 rna ? GO:0005840 ... Q8U232 35694843
    758196 7zai:3 (2.6) BS01 rna ? GO:0001682 ... P62008 35694843
    758197 7zai:6 (2.6) BS01 rna ? GO:0003723 ... Q9V138 35694843
    758198 7zai:A (2.6) BS01 rna ? GO:0003735 ... Q9V2K7 35694843
    758199 7zai:B (2.6) BS01 rna ? GO:0003735 ... Q9V191 35694843
    758200 7zai:C (2.6) BS01 ZN ? N/A G8ZFK7 35694843

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).