SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    758201 7zai:C (2.6) BS02 ZN ? N/A G8ZFK7 35694843
    758202 7zai:D (2.6) BS01 rna ? GO:0003723 ... P61992 35694843
    758203 7zai:E (2.6) BS01 rna ? GO:0003723 ... Q9V1U8 35694843
    758204 7zai:F (2.6) BS01 rna ? GO:0003723 ... Q9V1V5 35694843
    758205 7zai:F (2.6) BS02 ZN ? GO:0003723 ... Q9V1V5 35694843
    758206 7zai:G (2.6) BS01 rna ? GO:0003735 ... Q9UYS3 35694843
    758207 7zai:H (2.6) BS01 rna ? GO:0003735 ... Q9V109 35694843
    758208 7zai:H (2.6) BS02 rna ? GO:0003735 ... Q9V109 35694843
    758209 7zai:I (2.6) BS01 rna ? GO:0003735 ... Q9V1V0 35694843
    758210 7zai:J (2.6) BS01 rna ? GO:0003735 ... Q9UZL4 35694843
    758211 7zai:K (2.6) BS01 rna ? GO:0000462 ... Q9V195 35694843
    758212 7zai:L (2.6) BS01 rna ? GO:0000049 ... Q9V0V6 35694843
    758213 7zai:M (2.6) BS01 rna ? GO:0003735 ... P62010 35694843
    758214 7zai:N (2.6) BS01 rna ? GO:0003735 ... P61994 35694843
    758215 7zai:O (2.6) BS01 rna ? GO:0003676 ... Q9V1A0 35694843
    758216 7zai:P (2.6) BS01 rna ? GO:0002181 ... P62012 35694843
    758217 7zai:P (2.6) BS02 ZN ? GO:0002181 ... P62012 35694843
    758218 7zai:Q (2.6) BS01 rna ? GO:0003735 ... Q9V2K9 35694843
    758219 7zai:R (2.6) BS01 rna ? GO:0003735 ... Q9V1U5 35694843
    758220 7zai:R (2.6) BS02 ZN ? GO:0003735 ... Q9V1U5 35694843
    758221 7zai:S (2.6) BS01 rna ? GO:0003735 ... Q9V0G0 35694843
    758222 7zai:T (2.6) BS01 rna ? GO:0000028 ... Q9V1T9 35694843
    758223 7zai:U (2.6) BS01 rna ? GO:0000028 ... Q9V0G8 35694843
    758224 7zai:V (2.6) BS01 rna ? GO:0003735 ... Q9UY20 35694843
    758225 7zai:W (2.6) BS01 rna ? GO:0003735 ... Q9UXZ3 35694843
    758226 7zai:W (2.6) BS02 ZN ? GO:0003735 ... Q9UXZ3 35694843
    758227 7zai:X (2.6) BS01 rna ? GO:0000028 ... P61029 35694843
    758228 7zai:Y (2.6) BS01 rna ? GO:0003735 ... P61238 35694843
    758229 7zai:Z (2.6) BS01 rna ? GO:0003676 ... Q9V1U1 35694843
    758230 7zaj:AAA (1.0) BS01 HH8 ? N/A O60885 36367089
    758231 7zaj:AAA (1.0) BS02 HH8 ? N/A O60885 36367089
    758232 7zak:A (1.62) BS01 peptide N/A GO:0006955 ... N/A 37023751
    758233 7zak:A (1.62) BS02 MG N/A GO:0006955 ... N/A 37023751
    758234 7zak:B (1.62) BS01 peptide N/A GO:0006955 ... N/A 37023751
    758235 7zak:B (1.62) BS02 MG N/A GO:0006955 ... N/A 37023751
    758236 7zap:A (-1.00) BS01 rna ? GO:0003676 ... G3XAC6 37666821
    758237 7zaq:A (1.11) BS01 3Z7 ? N/A O60885 36367089
    758238 7zar:AAA (1.14) BS01 IJF ? N/A O60885 36367089
    758239 7zat:AAA (1.15) BS01 IJU ? N/A O60885 36367089
    758240 7zax:A (-1.00) BS01 peptide ? GO:0001530 ... A6TEL9 37224246
    758241 7zay:A (2.8) BS01 UDP 2.4.1.225 GO:0000139 ... Q16394 36402845
    758242 7zaz:AAA (2.0) BS01 ZPR N/A GO:0004252 ... N/A N/A
    758243 7zaz:AAA (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758244 7zaz:AAA (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    758245 7zaz:AAA (2.0) BS04 BCT N/A GO:0004252 ... N/A N/A
    758246 7zaz:BBB (2.0) BS01 BCT N/A GO:0004252 ... N/A N/A
    758247 7zaz:BBB (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758248 7zaz:BBB (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    758249 7zaz:BBB (2.0) BS04 ZPR N/A GO:0004252 ... N/A N/A
    758250 7zaz:BBB (2.0) BS05 BCT N/A GO:0004252 ... N/A N/A
    758251 7zaz:CCC (2.0) BS01 BCT N/A GO:0004252 ... N/A N/A
    758252 7zaz:CCC (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758253 7zaz:CCC (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    758254 7zaz:CCC (2.0) BS04 ZPR N/A GO:0004252 ... N/A N/A
    758255 7zaz:DDD (2.0) BS01 ZPR N/A GO:0004252 ... N/A N/A
    758256 7zaz:DDD (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758257 7zaz:DDD (2.0) BS03 BCT N/A GO:0004252 ... N/A N/A
    758258 7zaz:DDD (2.0) BS04 BCT N/A GO:0004252 ... N/A N/A
    758259 7zb0:A (2.47) BS01 peptide N/A GO:0004252 ... N/A N/A
    758260 7zb0:B (2.47) BS01 peptide N/A GO:0004252 ... N/A N/A
    758261 7zb0:B (2.47) BS02 BCT N/A GO:0004252 ... N/A N/A
    758262 7zb0:C (2.47) BS01 peptide N/A GO:0004252 ... N/A N/A
    758263 7zb0:D (2.47) BS01 peptide N/A GO:0004252 ... N/A N/A
    758264 7zb1:A (2.0) BS01 peptide N/A GO:0004252 ... N/A N/A
    758265 7zb1:B (2.0) BS01 peptide N/A GO:0004252 ... N/A N/A
    758266 7zb1:C (2.0) BS01 peptide N/A GO:0004252 ... N/A N/A
    758267 7zb1:C (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758268 7zb1:D (2.0) BS01 peptide N/A GO:0004252 ... N/A N/A
    758269 7zb1:D (2.0) BS02 BCT N/A GO:0004252 ... N/A N/A
    758270 7zb2:CCC (1.94) BS01 MG N/A GO:0004252 ... N/A N/A
    758271 7zb2:CCC (1.94) BS02 MG N/A GO:0004252 ... N/A N/A
    758272 7zb2:FFF (1.94) BS01 MG N/A GO:0004252 ... N/A N/A
    758273 7zb3:A (1.51) BS01 IVG N/A GO:0004553 ... N/A N/A
    758274 7zb3:B (1.51) BS01 IVG N/A GO:0004553 ... N/A N/A
    758275 7zb5:D (2.8) BS01 dna ? GO:0003677 ... G0SAL6 37106137
    758276 7zb5:D (2.8) BS02 dna ? GO:0003677 ... G0SAL6 37106137
    758277 7zb5:E (2.8) BS01 dna ? GO:0003677 ... G0S6C0 37106137
    758278 7zb5:E (2.8) BS02 dna ? GO:0003677 ... G0S6C0 37106137
    758279 7zb5:G (2.8) BS01 dna ? GO:0003677 ... G0SAL6 37106137
    758280 7zb5:G (2.8) BS02 dna ? GO:0003677 ... G0SAL6 37106137
    758281 7zb5:H (2.8) BS01 dna ? GO:0003677 ... G0S6C0 37106137
    758282 7zb5:H (2.8) BS02 dna ? GO:0003677 ... G0S6C0 37106137
    758283 7zb9:A (1.15) BS01 HEM 1.14.15.14
    1.14.15.28
    GO:0004497 ... P9WPP3 36601808
    758284 7zb9:A (1.15) BS02 M65 1.14.15.14
    1.14.15.28
    GO:0004497 ... P9WPP3 36601808
    758285 7zba:A (1.23) BS01 IL7 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758286 7zba:B (1.23) BS01 IL7 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758287 7zba:B (1.23) BS02 IL7 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758288 7zbb:A (1.95) BS01 ILJ 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758289 7zbb:B (1.95) BS01 ILJ 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758290 7zbc:A (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    758291 7zbc:B (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    758292 7zbd:A (1.68) BS01 ILQ 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758293 7zbd:B (1.68) BS01 ILU 3.8.1.5 GO:0003824 ... P0A3G3 37322101
    758294 7zbe:A (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    758295 7zbe:B (1.8) BS01 RET ? GO:0000139 ... P02699 36949205
    758296 7zbg:A (2.3) BS01 ADP 5.6.2.2 GO:0003677 ... Q02880 35660158
    758297 7zbg:A (2.3) BS02 ITH 5.6.2.2 GO:0003677 ... Q02880 35660158
    758298 7zbh:A (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758299 7zbh:A (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758300 7zbh:B (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758301 7zbh:B (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758302 7zbh:D (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758303 7zbh:D (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758304 7zbh:F (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758305 7zbh:F (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758306 7zbh:I (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758307 7zbh:I (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758308 7zbh:K (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    758309 7zbh:K (3.3) BS02 ZN 3.4.24.- GO:0004176 ... O51729 N/A
    758310 7zbo:A (2.32) BS01 NAP N/A N/A N/A 35349204
    758311 7zbo:B (2.32) BS01 NAP N/A N/A N/A 35349204
    758312 7zbo:C (2.32) BS01 NAP N/A N/A N/A 35349204
    758313 7zbo:D (2.32) BS01 NAP N/A N/A N/A 35349204
    758314 7zbp:A (1.45) BS01 HEM N/A GO:0004601 ... N/A 35624755
    758315 7zbp:A (1.45) BS02 MG N/A GO:0004601 ... N/A 35624755
    758316 7zbp:B (1.45) BS01 HEM N/A GO:0004601 ... N/A 35624755
    758317 7zbp:B (1.45) BS02 MG N/A GO:0004601 ... N/A 35624755
    758318 7zbp:C (1.45) BS01 HEM N/A GO:0004601 ... N/A 35624755
    758319 7zbp:C (1.45) BS02 MG N/A GO:0004601 ... N/A 35624755
    758320 7zbp:D (1.45) BS01 HEM N/A GO:0004601 ... N/A 35624755
    758321 7zbp:D (1.45) BS02 MG N/A GO:0004601 ... N/A 35624755
    758322 7zbu:A (4.31) BS01 3Q9 ? GO:0016020 ... P0DTC2 35981534
    758323 7zbv:A (1.95) BS01 ZN 3.4.24.3 GO:0004222 ... Q9X721 36154055
    758324 7zbv:A (1.95) BS02 ITO 3.4.24.3 GO:0004222 ... Q9X721 36154055
    758325 7zbv:A (1.95) BS03 CA 3.4.24.3 GO:0004222 ... Q9X721 36154055
    758326 7zbw:C (3.5) BS01 peptide ? GO:0000082 ... Q13616 37028429
    758327 7zbz:R (3.1) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758328 7zbz:R (3.1) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758329 7zbz:R (3.1) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37028429
    758330 7zc0:AAA (2.25) BS01 CA N/A GO:0005975 ... N/A 36442227
    758331 7zc3:A (1.9) BS01 ZN ? GO:0005507 ... O00244 36291703
    758332 7zc5:B (3.0) BS01 SF4 7.1.1.- GO:0003954 ... P0AFC7 36104567
    758333 7zc5:C (3.0) BS01 SF4 7.1.1.- GO:0003824 ... P33599 36104567
    758334 7zc5:E (3.0) BS01 FES 7.1.1.- GO:0003954 ... P0AFD1 36104567
    758335 7zc5:F (3.0) BS01 SF4 7.1.1.- GO:0003954 ... P31979 36104567
    758336 7zc5:F (3.0) BS02 FMN 7.1.1.- GO:0003954 ... P31979 36104567
    758337 7zc5:F (3.0) BS03 NAI 7.1.1.- GO:0003954 ... P31979 36104567
    758338 7zc5:G (3.0) BS01 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758339 7zc5:G (3.0) BS02 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758340 7zc5:G (3.0) BS03 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758341 7zc5:G (3.0) BS04 FES 7.1.1.- GO:0003954 ... P33602 36104567
    758342 7zc5:G (3.0) BS05 CA 7.1.1.- GO:0003954 ... P33602 36104567
    758343 7zc5:I (3.0) BS01 SF4 7.1.1.- GO:0003954 ... P0AFD6 36104567
    758344 7zc5:I (3.0) BS02 SF4 7.1.1.- GO:0003954 ... P0AFD6 36104567
    758345 7zc6:A (4.27) BS01 FE 7.-.-.- GO:0005886 ... A0A923J0P9 36274063
    758346 7zc6:B (4.27) BS01 SF4 7.-.-.- GO:0005886 ... A0A923E755 36274063
    758347 7zc6:B (4.27) BS02 SF4 7.-.-.- GO:0005886 ... A0A923E755 36274063
    758348 7zc6:B (4.27) BS03 SF4 7.-.-.- GO:0005886 ... A0A923E755 36274063
    758349 7zc6:B (4.27) BS04 SF4 7.-.-.- GO:0005886 ... A0A923E755 36274063
    758350 7zc6:B (4.27) BS05 SF4 7.-.-.- GO:0005886 ... A0A923E755 36274063
    758351 7zc6:C (4.27) BS01 SF4 7.-.-.- GO:0005886 ... A0A923IZ11 36274063
    758352 7zc6:C (4.27) BS02 SF4 7.-.-.- GO:0005886 ... A0A923IZ11 36274063
    758353 7zc6:C (4.27) BS03 FMN 7.-.-.- GO:0005886 ... A0A923IZ11 36274063
    758354 7zc6:D (4.27) BS01 FMN 7.-.-.- GO:0005886 ... A0A923IYK2 36274063
    758355 7zc6:D (4.27) BS02 RBF 7.-.-.- GO:0005886 ... A0A923IYK2 36274063
    758356 7zc6:E (4.27) BS01 FE 7.-.-.- GO:0005886 ... A0A923IZB8 36274063
    758357 7zc6:G (4.27) BS01 FMN 7.-.-.- GO:0005886 ... A0A923J084 36274063
    758358 7zc7:A (2.3) BS01 IKL 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    758359 7zc7:B (2.3) BS01 IKL 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    758360 7zc7:C (2.3) BS01 IKL 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 N/A
    758361 7zca:A (1.68) BS01 IKF ? GO:0000166 ... E6V140 36762980
    758362 7zca:A (1.68) BS02 FAD ? GO:0000166 ... E6V140 36762980
    758363 7zca:A (1.68) BS03 IKF ? GO:0000166 ... E6V140 36762980
    758364 7zcc:A (1.848) BS01 MN ? GO:0046872 ... P46327 N/A
    758365 7zcc:B (1.848) BS01 MN ? GO:0046872 ... P46327 N/A
    758366 7zcc:C (1.848) BS01 MN ? GO:0046872 ... P46327 N/A
    758367 7zcc:D (1.848) BS01 MN ? GO:0046872 ... P46327 N/A
    758368 7zcd:AAA (2.1) BS01 PX9 ? GO:0005515 ... P02754 37610054
    758369 7zci:B (2.69) BS01 SF4 7.1.1.- GO:0003954 ... P0AFC7 36104567
    758370 7zci:C (2.69) BS01 SF4 7.1.1.- GO:0003824 ... P33599 36104567
    758371 7zci:E (2.69) BS01 FES 7.1.1.- GO:0003954 ... P0AFD1 36104567
    758372 7zci:F (2.69) BS01 SF4 7.1.1.- GO:0003954 ... P31979 36104567
    758373 7zci:F (2.69) BS02 FMN 7.1.1.- GO:0003954 ... P31979 36104567
    758374 7zci:F (2.69) BS03 NAI 7.1.1.- GO:0003954 ... P31979 36104567
    758375 7zci:G (2.69) BS01 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758376 7zci:G (2.69) BS02 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758377 7zci:G (2.69) BS03 SF4 7.1.1.- GO:0003954 ... P33602 36104567
    758378 7zci:G (2.69) BS04 FES 7.1.1.- GO:0003954 ... P33602 36104567
    758379 7zci:G (2.69) BS05 CA 7.1.1.- GO:0003954 ... P33602 36104567
    758380 7zci:I (2.69) BS01 SF4 7.1.1.- GO:0003954 ... P0AFD6 36104567
    758381 7zci:I (2.69) BS02 SF4 7.1.1.- GO:0003954 ... P0AFD6 36104567
    758382 7zcj:A (1.56) BS01 SIW N/A N/A N/A N/A
    758383 7zcl:A (1.95) BS01 HEC N/A GO:0004601 ... N/A 35624755
    758384 7zcl:A (1.95) BS02 MG N/A GO:0004601 ... N/A 35624755
    758385 7zcl:B (1.95) BS01 MG N/A GO:0004601 ... N/A 35624755
    758386 7zcl:B (1.95) BS02 HEC N/A GO:0004601 ... N/A 35624755
    758387 7zcm:A (2.85) BS01 RET ? GO:0005216 ... P42196 N/A
    758388 7zcn:A (1.19) BS01 FRU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758389 7zcn:A (1.19) BS02 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758390 7zcn:A (1.19) BS03 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758391 7zcn:A (1.19) BS04 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758392 7zcn:A (1.19) BS05 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758393 7zcn:A (1.19) BS06 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758394 7zco:A (1.22) BS01 FRU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758395 7zco:A (1.22) BS02 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758396 7zco:A (1.22) BS03 CU 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758397 7zco:A (1.22) BS04 NO 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758398 7zco:A (1.22) BS05 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758399 7zco:A (1.22) BS06 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453
    758400 7zco:A (1.22) BS07 NO2 1.7.2.1 GO:0005507 ... H0SLX7 35862453

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).