SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    759401 7zh4:D (2.49) BS01 ZN 3.4.19.12 GO:0001501 ... O94782 36170365
    759402 7zh4:D (2.49) BS02 JDA 3.4.19.12 GO:0001501 ... O94782 36170365
    759403 7zh6:A (3.67) BS01 C0R ? GO:0001692 ... O75751 36344565
    759404 7zh8:A (2.3) BS01 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759405 7zh8:A (2.3) BS02 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759406 7zh8:B (2.3) BS01 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759407 7zh8:B (2.3) BS02 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759408 7zh8:C (2.3) BS01 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759409 7zh8:C (2.3) BS02 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759410 7zh8:D (2.3) BS01 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759411 7zh8:D (2.3) BS02 IWU 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 36288453
    759412 7zh9:A (1.72) BS01 ATP 6.2.1.45 GO:0004839 ... P22515 35970836
    759413 7zha:A (3.55) BS01 JDW ? GO:0001692 ... O75751 36344565
    759414 7zhb:A (1.89) BS01 UPG ? GO:0003980 ... G0SB58 N/A
    759415 7zhb:A (1.89) BS02 CA ? GO:0003980 ... G0SB58 N/A
    759416 7zhc:A (1.819) BS01 ACO ? GO:0008080 ... A0A2K1KKM6 36786691
    759417 7zhc:B (1.819) BS01 ACO ? GO:0008080 ... A0A2K1KKM6 36786691
    759418 7zhd:A (1.65) BS01 IQ4 ? GO:0046872 ... B8I0Z6 35852818
    759419 7zhd:A (1.65) BS02 ZN ? GO:0046872 ... B8I0Z6 35852818
    759420 7zhf:A (1.8) BS01 GNP ? GO:0003924 ... A0A0U2WWJ1 37962382
    759421 7zhg:0 (2.25) BS01 rna ? GO:0005840 ... Q8U232 35694843
    759422 7zhg:3 (2.25) BS01 rna ? GO:0001682 ... P62008 35694843
    759423 7zhg:A (2.25) BS01 rna ? GO:0003735 ... Q9V2K7 35694843
    759424 7zhg:B (2.25) BS01 rna ? GO:0003735 ... Q9V191 35694843
    759425 7zhg:C (2.25) BS01 ZN ? N/A G8ZFK7 35694843
    759426 7zhg:C (2.25) BS02 ZN ? N/A G8ZFK7 35694843
    759427 7zhg:D (2.25) BS01 rna ? GO:0003723 ... P61992 35694843
    759428 7zhg:E (2.25) BS01 rna ? GO:0003723 ... Q9V1U8 35694843
    759429 7zhg:F (2.25) BS01 rna ? GO:0003723 ... Q9V1V5 35694843
    759430 7zhg:F (2.25) BS02 ZN ? GO:0003723 ... Q9V1V5 35694843
    759431 7zhg:G (2.25) BS01 rna ? GO:0003735 ... Q9UYS3 35694843
    759432 7zhg:H (2.25) BS01 rna ? GO:0003735 ... Q9V109 35694843
    759433 7zhg:H (2.25) BS02 rna ? GO:0003735 ... Q9V109 35694843
    759434 7zhg:I (2.25) BS01 rna ? GO:0003735 ... Q9V1V0 35694843
    759435 7zhg:J (2.25) BS01 rna ? GO:0003735 ... Q9UZL4 35694843
    759436 7zhg:K (2.25) BS01 rna ? GO:0000462 ... Q9V195 35694843
    759437 7zhg:L (2.25) BS01 rna ? GO:0000049 ... Q9V0V6 35694843
    759438 7zhg:M (2.25) BS01 rna ? GO:0003735 ... P62010 35694843
    759439 7zhg:N (2.25) BS01 rna ? GO:0003735 ... P61994 35694843
    759440 7zhg:O (2.25) BS01 rna ? GO:0003676 ... Q9V1A0 35694843
    759441 7zhg:P (2.25) BS01 rna ? GO:0002181 ... P62012 35694843
    759442 7zhg:P (2.25) BS02 ZN ? GO:0002181 ... P62012 35694843
    759443 7zhg:Q (2.25) BS01 rna ? GO:0003735 ... Q9V2K9 35694843
    759444 7zhg:R (2.25) BS01 rna ? GO:0003735 ... Q9V1U5 35694843
    759445 7zhg:R (2.25) BS02 ZN ? GO:0003735 ... Q9V1U5 35694843
    759446 7zhg:S (2.25) BS01 rna ? GO:0003735 ... Q9V0G0 35694843
    759447 7zhg:T (2.25) BS01 rna ? GO:0000028 ... Q9V1T9 35694843
    759448 7zhg:U (2.25) BS01 rna ? GO:0000028 ... Q9V0G8 35694843
    759449 7zhg:V (2.25) BS01 rna ? GO:0003735 ... Q9UY20 35694843
    759450 7zhg:W (2.25) BS01 rna ? GO:0003735 ... Q9UXZ3 35694843
    759451 7zhg:W (2.25) BS02 ZN ? GO:0003735 ... Q9UXZ3 35694843
    759452 7zhg:X (2.25) BS01 rna ? GO:0000028 ... P61029 35694843
    759453 7zhg:Y (2.25) BS01 rna ? GO:0003735 ... P61238 35694843
    759454 7zhg:Z (2.25) BS01 rna ? GO:0003676 ... Q9V1U1 35694843
    759455 7zhh:A (1.6) BS01 rna ? GO:0003676 ... B7Z0E2 36688322
    759456 7zhi:A (2.946) BS01 IND 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    759457 7zhi:A (2.946) BS02 IND 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    759458 7zhi:B (2.946) BS01 IND 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    759459 7zhi:C (2.946) BS01 IND 2.1.3.2 GO:0004070 ... A0A5K1K910 36195578
    759460 7zhk:A (2.4) BS01 GDP ? GO:0003924 ... A0A0U2WWJ1 37962382
    759461 7zhk:B (2.4) BS01 GDP ? GO:0003924 ... A0A0U2WWJ1 37962382
    759462 7zhk:C (2.4) BS01 GDP ? GO:0003924 ... A0A0U2WWJ1 37962382
    759463 7zhm:A (2.7) BS01 NAD ? N/A Q8ZRL0 36484105
    759464 7zhm:B (2.7) BS01 NAD ? N/A Q8ZRL0 36484105
    759465 7zhm:C (2.7) BS01 NAD ? GO:0000166 ... A0A0H3TET1 36484105
    759466 7zhm:D (2.7) BS01 NAD ? GO:0000166 ... A0A0H3TET1 36484105
    759467 7zhn:A (1.85) BS01 VP7 2.7.11.1 GO:0004672 ... Q5TCY1 37059819
    759468 7zho:A (2.08) BS01 IQR 2.7.11.1 GO:0004672 ... Q5TCY1 37059819
    759469 7zhp:A (1.8) BS01 IQY 2.7.11.1 GO:0004672 ... Q5TCY1 37059819
    759470 7zhq:A (1.8) BS01 IRD 2.7.11.1 GO:0004672 ... Q5TCY1 37059819
    759471 7zhs:A (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759472 7zhs:A (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759473 7zhs:B (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759474 7zhs:B (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759475 7zhs:C (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759476 7zhs:C (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759477 7zhs:D (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759478 7zhs:D (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759479 7zhs:E (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759480 7zhs:E (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759481 7zhs:F (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759482 7zhs:F (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759483 7zhs:G (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759484 7zhs:G (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759485 7zhs:H (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759486 7zhs:H (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759487 7zhs:I (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759488 7zhs:I (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759489 7zhs:J (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759490 7zhs:J (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759491 7zhs:K (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759492 7zhs:K (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759493 7zhs:L (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759494 7zhs:L (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759495 7zhs:M (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759496 7zhs:M (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759497 7zhs:N (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759498 7zhs:N (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759499 7zhs:O (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759500 7zhs:O (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759501 7zhs:P (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759502 7zhs:P (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759503 7zhs:Q (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759504 7zhs:Q (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759505 7zhs:R (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759506 7zhs:R (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759507 7zhs:S (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759508 7zhs:S (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759509 7zhs:T (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759510 7zhs:T (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759511 7zhs:U (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759512 7zhs:U (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759513 7zhs:V (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759514 7zhs:V (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759515 7zhs:W (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759516 7zhs:W (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759517 7zhs:X (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759518 7zhs:X (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759519 7zhs:Y (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759520 7zhs:Y (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759521 7zhs:Z (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759522 7zhs:Z (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759523 7zhs:a (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759524 7zhs:a (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759525 7zhs:b (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759526 7zhs:b (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759527 7zhs:c (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759528 7zhs:c (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759529 7zhs:d (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759530 7zhs:d (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759531 7zhs:e (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759532 7zhs:e (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759533 7zhs:f (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759534 7zhs:f (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759535 7zhs:g (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759536 7zhs:g (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759537 7zhs:h (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759538 7zhs:h (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759539 7zhs:i (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759540 7zhs:i (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759541 7zhs:j (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759542 7zhs:j (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759543 7zhs:k (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759544 7zhs:k (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759545 7zhs:l (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759546 7zhs:l (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759547 7zhs:m (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759548 7zhs:m (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759549 7zhs:n (6.9) BS01 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759550 7zhs:n (6.9) BS02 ZN ? GO:0000794 ... O60884
    Q12306
    37670029
    759551 7zhu:A (1.7) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759552 7zhu:B (1.7) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759553 7zhv:B (3.3) BS01 BG6 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759554 7zhw:A (3.3) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759555 7zhw:B (3.3) BS01 BG6 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759556 7zhw:B (3.3) BS02 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759557 7zhx:A (1.9) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759558 7zhy:A (1.99) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759559 7zhy:B (1.99) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759560 7zhz:A (2.5) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759561 7zhz:B (2.5) BS01 NDP 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759562 7zhz:B (2.5) BS02 BG6 1.1.1.49 GO:0000166 ... A2CIL3 36494598
    759563 7zi0:A (3.0) BS01 V0S ? GO:0004888 ... P0ABE7
    Q99835
    35658032
    759564 7zi0:A (3.0) BS02 CLR ? GO:0004888 ... P0ABE7
    Q99835
    35658032
    759565 7zi0:A (3.0) BS03 MPG ? GO:0004888 ... P0ABE7
    Q99835
    35658032
    759566 7zi0:B (3.0) BS01 V0S ? GO:0004888 ... P0ABE7
    Q99835
    35658032
    759567 7zi0:B (3.0) BS02 CLR ? GO:0004888 ... P0ABE7
    Q99835
    35658032
    759568 7zi1:A (1.85) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759569 7zi1:A (1.85) BS02 JCA 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759570 7zi1:A (1.85) BS03 JCA 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759571 7zi2:A (2.18) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759572 7zi2:A (2.18) BS02 J7W 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759573 7zi3:A (1.9) BS01 J98 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759574 7zi3:A (1.9) BS02 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 37248212
    759575 7zi4:A (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    759576 7zi4:B (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    759577 7zi4:C (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    759578 7zi4:D (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    759579 7zi4:E (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    759580 7zi4:F (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    759581 7zi4:G (3.2) BS01 dna 3.6.4.- GO:0000070 ... Q9ULG1 N/A
    759582 7zi4:G (3.2) BS02 dna 3.6.4.- GO:0000070 ... Q9ULG1 N/A
    759583 7zi4:G (3.2) BS03 ADP 3.6.4.- GO:0000070 ... Q9ULG1 N/A
    759584 7zi4:G (3.2) BS04 BEF 3.6.4.- GO:0000070 ... Q9ULG1 N/A
    759585 7zi4:H (3.2) BS01 ADP ? GO:0000723 ... Q9H9F9 N/A
    759586 7zi4:I (3.2) BS01 dna ? GO:0000786 ... P68431 N/A
    759587 7zi4:I (3.2) BS02 dna ? GO:0000786 ... P68431 N/A
    759588 7zi4:J (3.2) BS01 dna ? GO:0000781 ... P62805 N/A
    759589 7zi4:J (3.2) BS02 dna ? GO:0000781 ... P62805 N/A
    759590 7zi4:K (3.2) BS01 dna ? GO:0000786 ... P04908 N/A
    759591 7zi4:K (3.2) BS02 dna ? GO:0000786 ... P04908 N/A
    759592 7zi4:L (3.2) BS01 dna ? GO:0000786 ... P06899 N/A
    759593 7zi4:L (3.2) BS02 dna ? GO:0000786 ... P06899 N/A
    759594 7zi4:M (3.2) BS01 dna ? GO:0000786 ... P68431 N/A
    759595 7zi4:M (3.2) BS02 dna ? GO:0000786 ... P68431 N/A
    759596 7zi4:N (3.2) BS01 dna ? GO:0000781 ... P62805 N/A
    759597 7zi4:N (3.2) BS02 dna ? GO:0000781 ... P62805 N/A
    759598 7zi4:O (3.2) BS01 dna ? GO:0000786 ... P04908 N/A
    759599 7zi4:O (3.2) BS02 dna ? GO:0000786 ... P04908 N/A
    759600 7zi4:P (3.2) BS01 dna ? GO:0000786 ... P06899 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).