SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7401 1coh:B (2.9) BS01 COH ? GO:0004601 ... P68871 2738915
    7402 1coh:C (2.9) BS01 HEM ? GO:0004601 ... P69905 2738915
    7403 1coh:D (2.9) BS01 COH ? GO:0004601 ... P68871 2738915
    7404 1coj:A (1.9) BS01 FE 1.15.1.1 GO:0004784 ... Q9X6W9 9236127
    7405 1com:A (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7406 1com:A (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7407 1com:B (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7408 1com:B (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7409 1com:C (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7410 1com:C (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7411 1com:D (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7412 1com:D (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7413 1com:E (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7414 1com:E (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7415 1com:F (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7416 1com:F (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7417 1com:G (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7418 1com:G (2.2) BS02 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7419 1com:H (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7420 1com:I (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7421 1com:J (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7422 1com:K (2.2) BS01 PRE 5.4.99.5 GO:0004106 ... P19080 8046752
    7423 1con:A (2.0) BS01 CD ? GO:0030246 ... P02866 15299493
    7424 1con:A (2.0) BS02 CA ? GO:0030246 ... P02866 15299493
    7425 1con:A (2.0) BS03 CD ? GO:0030246 ... P02866 15299493
    7426 1cor:A (-1.00) BS01 HEC ? GO:0005506 ... P00101 1327105
    7427 1cot:A (1.7) BS01 HEC ? GO:0009055 ... P00096 8179333
    7428 1cow:A (3.1) BS01 ANP 3.6.1.34 GO:0005515 ... P19483 8692918
    7429 1cow:B (3.1) BS01 MG 3.6.1.34 GO:0005515 ... P19483 8692918
    7430 1cow:B (3.1) BS02 ANP 3.6.1.34 GO:0005515 ... P19483 8692918
    7431 1cow:C (3.1) BS01 ANP 3.6.1.34 GO:0005515 ... P19483 8692918
    7432 1cow:C (3.1) BS02 ADP 3.6.1.34 GO:0005515 ... P19483 8692918
    7433 1cow:D (3.1) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 8692918
    7434 1cow:E (3.1) BS01 AUR 7.1.2.2 GO:0005515 ... P00829 8692918
    7435 1cow:F (3.1) BS01 ANP 7.1.2.2 GO:0005515 ... P00829 8692918
    7436 1cow:F (3.1) BS02 AUR 7.1.2.2 GO:0005515 ... P00829 8692918
    7437 1coy:A (1.8) BS01 AND 1.1.3.6
    5.3.3.1
    GO:0004769 ... P22637 8218217
    7438 1coy:A (1.8) BS02 FAD 1.1.3.6
    5.3.3.1
    GO:0004769 ... P22637 8218217
    7439 1coz:A (2.0) BS01 CTP 2.7.7.39 GO:0003824 ... P27623 10508782
    7440 1coz:B (2.0) BS01 CTP 2.7.7.39 GO:0003824 ... P27623 10508782
    7441 1cp0:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7442 1cp2:A (1.93) BS01 SF4 1.18.6.1 GO:0005524 ... P00456 9677296
    7443 1cp2:B (1.93) BS01 SF4 1.18.6.1 GO:0005524 ... P00456 9677296
    7444 1cp3:A (2.3) BS01 peptide 3.4.22.56 GO:0001554 ... P42574 9045680
    7445 1cp3:B (2.3) BS01 peptide 3.4.22.56 GO:0001554 ... P42574 9045680
    7446 1cp4:A (1.9) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 2261467
    7447 1cp5:A (2.1) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7448 1cp6:A (1.9) BS01 ZN 3.4.11.10 GO:0006508 ... Q01693 10413478
    7449 1cp6:A (1.9) BS02 ZN 3.4.11.10 GO:0006508 ... Q01693 10413478
    7450 1cp6:A (1.9) BS03 BUB 3.4.11.10 GO:0006508 ... Q01693 10413478 MOAD: Ki=10uM
    7451 1cp7:A (1.58) BS01 ZN 3.4.11.24 GO:0004177 ... P80561 10771423
    7452 1cp7:A (1.58) BS02 ZN 3.4.11.24 GO:0004177 ... P80561 10771423
    7453 1cp7:A (1.58) BS03 CA 3.4.11.24 GO:0004177 ... P80561 10771423
    7454 1cp9:B (2.5) BS01 CA ? GO:0016787 ... Q7WZI9 10548042
    7455 1cpd:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7972020
    7456 1cpe:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7972020
    7457 1cpf:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7972020
    7458 1cpg:A (2.2) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 7972020
    7459 1cph:B (1.9) BS01 peptide ? GO:0005179 ... P01317 1477273
    7460 1cph:B (1.9) BS02 DCE ? GO:0005179 ... P01317 1477273
    7461 1cpi:A (2.05) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 N/A
    7462 1cpi:B (2.05) BS01 peptide 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 N/A
    7463 1cpm:A (2.0) BS01 CA 3.2.1.73 GO:0004553 ... P23904 7937966
    7464 1cpn:A (1.8) BS01 CA 3.2.1.73 GO:0004553 ... P23904 7937966
    7465 1cpo:A (1.9) BS01 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7466 1cpo:A (1.9) BS02 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7467 1cpo:A (1.9) BS03 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7468 1cpo:A (1.9) BS04 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7469 1cpo:A (1.9) BS05 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7470 1cpo:A (1.9) BS06 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7471 1cpo:A (1.9) BS07 MAN 1.11.1.10 GO:0004601 ... P04963 8747463
    7472 1cpo:A (1.9) BS08 MN 1.11.1.10 GO:0004601 ... P04963 8747463
    7473 1cpo:A (1.9) BS09 HEM 1.11.1.10 GO:0004601 ... P04963 8747463
    7474 1cpq:A (1.72) BS01 HEM ? GO:0005506 ... P00147 8676382
    7475 1cpr:A (2.1) BS01 ZN ? GO:0005506 ... P00147 15299853
    7476 1cpr:A (2.1) BS02 HEM ? GO:0005506 ... P00147 15299853
    7477 1cps:A (2.25) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 1527041
    7478 1cps:A (2.25) BS02 CPM 3.4.17.1 GO:0004181 ... P00730 1527041 MOAD: Ki=0.22uM
    7479 1cpt:A (2.3) BS01 HEM 1.14.-.- GO:0004497 ... P33006 8120894
    7480 1cpu:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P04746 10769135
    7481 1cpu:A (2.0) BS02 AGL 3.2.1.1 GO:0003824 ... P04746 10769135
    7482 1cpu:A (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P04746 10769135
    7483 1cpu:A (2.0) BS04 GLC 3.2.1.1 GO:0003824 ... P04746 10769135
    7484 1cpu:A (2.0) BS05 CA 3.2.1.1 GO:0003824 ... P04746 10769135
    7485 1cpu:A (2.0) BS06 HMC 3.2.1.1 GO:0003824 ... P04746 10769135
    7486 1cpw:A (2.2) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 11084036
    7487 1cpx:A (2.0) BS01 ZN 3.4.17.1 GO:0004181 ... P00730 9843422
    7488 1cq1:A (1.9) BS01 BGC 1.1.5.2 GO:0008876 ... P13650 10508152
    7489 1cq1:A (1.9) BS02 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7490 1cq1:A (1.9) BS03 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7491 1cq1:A (1.9) BS04 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7492 1cq1:A (1.9) BS05 PQQ 1.1.5.2 GO:0008876 ... P13650 10508152
    7493 1cq1:B (1.9) BS01 BGC 1.1.5.2 GO:0008876 ... P13650 10508152
    7494 1cq1:B (1.9) BS02 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7495 1cq1:B (1.9) BS03 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7496 1cq1:B (1.9) BS04 CA 1.1.5.2 GO:0008876 ... P13650 10508152
    7497 1cq1:B (1.9) BS05 PQQ 1.1.5.2 GO:0008876 ... P13650 10508152
    7498 1cq2:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 10725379
    7499 1cq4:A (1.8) BS01 peptide ? GO:0004867 ... P01053 9990011
    7500 1cq6:A (2.7) BS01 PY4 2.6.1.1 GO:0003824 ... P00509 10858450
    7501 1cq7:A (2.4) BS01 PY5 2.6.1.1 GO:0003824 ... P00509 10858450
    7502 1cq8:A (2.4) BS01 PY6 2.6.1.1 GO:0003824 ... P00509 10858450
    7503 1cq9:A (3.5) BS01 CA ? GO:0030246 ... P02872 11288176
    7504 1cq9:A (3.5) BS02 MN ? GO:0030246 ... P02872 11288176
    7505 1cq9:B (3.5) BS01 CA ? GO:0030246 ... P02872 11288176
    7506 1cq9:B (3.5) BS02 MN ? GO:0030246 ... P02872 11288176
    7507 1cq9:C (3.5) BS01 CA ? GO:0030246 ... P02872 11288176
    7508 1cq9:C (3.5) BS02 MN ? GO:0030246 ... P02872 11288176
    7509 1cq9:D (3.5) BS01 CA ? GO:0030246 ... P02872 11288176
    7510 1cq9:D (3.5) BS02 MN ? GO:0030246 ... P02872 11288176
    7511 1cqe:A (3.1) BS01 HEM 1.14.99.1 GO:0004601 ... P05979 8121489
    7512 1cqe:A (3.1) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 8121489 BindingDB: IC50=150nM, Ki=1000nM
    7513 1cqe:B (3.1) BS01 HEM 1.14.99.1 GO:0004601 ... P05979 8121489
    7514 1cqe:B (3.1) BS02 FLP 1.14.99.1 GO:0004601 ... P05979 8121489 BindingDB: IC50=150nM, Ki=1000nM
    7515 1cqf:A (2.2) BS01 GLA ? GO:0005576 ... P69179 N/A
    7516 1cqf:A (2.2) BS02 GLA ? GO:0005576 ... P69179 N/A
    7517 1cqf:B (2.2) BS01 GLA ? GO:0005576 ... P69179 N/A
    7518 1cqf:B (2.2) BS02 GLA ? GO:0005576 ... P69179 N/A
    7519 1cqf:B (2.2) BS03 GAL ? GO:0005576 ... P69179 N/A
    7520 1cqf:B (2.2) BS04 GLA ? GO:0005576 ... P69179 N/A
    7521 1cqf:C (2.2) BS01 GLA ? GO:0005576 ... P69179 N/A
    7522 1cqf:C (2.2) BS02 GLA ? GO:0005576 ... P69179 N/A
    7523 1cqf:D (2.2) BS01 GLA ? GO:0005576 ... P69179 N/A
    7524 1cqf:D (2.2) BS02 GLA ? GO:0005576 ... P69179 N/A
    7525 1cqf:E (2.2) BS01 GLA ? GO:0005576 ... P69179 N/A
    7526 1cqf:E (2.2) BS02 GLA ? GO:0005576 ... P69179 N/A
    7527 1cqg:A (-1.00) BS01 peptide ? GO:0003723 ... P10599 8736558
    7528 1cqh:A (-1.00) BS01 peptide ? GO:0003723 ... P10599 8736558
    7529 1cqi:A (3.3) BS01 PO4 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7530 1cqi:A (3.3) BS02 COA 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7531 1cqi:B (3.3) BS01 MG 6.2.1.5 GO:0000287 ... P0A836 10625475
    7532 1cqi:B (3.3) BS02 ADP 6.2.1.5 GO:0000287 ... P0A836 10625475
    7533 1cqi:B (3.3) BS03 COA 6.2.1.5 GO:0000287 ... P0A836 10625475
    7534 1cqi:D (3.3) BS01 PO4 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7535 1cqi:D (3.3) BS02 COA 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7536 1cqi:E (3.3) BS01 MG 6.2.1.5 GO:0000287 ... P0A836 10625475
    7537 1cqi:E (3.3) BS02 ADP 6.2.1.5 GO:0000287 ... P0A836 10625475
    7538 1cqj:A (2.9) BS01 PO4 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7539 1cqj:A (2.9) BS02 COA 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7540 1cqj:B (2.9) BS01 COA 6.2.1.5 GO:0000287 ... P0A836 10625475
    7541 1cqj:B (2.9) BS02 COA 6.2.1.5 GO:0000287 ... P0A836 10625475
    7542 1cqj:D (2.9) BS01 PO4 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7543 1cqj:D (2.9) BS02 COA 6.2.1.5 GO:0003824 ... P0AGE9 10625475
    7544 1cqj:E (2.9) BS01 COA 6.2.1.5 GO:0000287 ... P0A836 10625475
    7545 1cqp:A (2.6) BS01 MG ? N/A P20701 10493852
    7546 1cqp:A (2.6) BS02 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    7547 1cqp:A (2.6) BS03 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    7548 1cqp:B (2.6) BS01 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    7549 1cqp:B (2.6) BS02 MG ? N/A P20701 10493852
    7550 1cqp:B (2.6) BS03 803 ? N/A P20701 10493852 BindingDB: Kd=12900nM, IC50=2400nM
    7551 1cqq:A (1.85) BS01 AG7 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0004197 ... P04936 10500114
    7552 1cqr:A (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10543949
    7553 1cqr:A (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10543949
    7554 1cqr:A (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7555 1cqr:A (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7556 1cqr:A (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7557 1cqr:B (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10543949
    7558 1cqr:B (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10543949
    7559 1cqr:B (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7560 1cqr:B (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7561 1cqr:B (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10543949
    7562 1cqs:A (1.9) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 10653633
    7563 1cqs:B (1.9) BS01 EQU 5.3.3.1 GO:0004769 ... P07445 10653633
    7564 1cqt:A (3.2) BS01 dna ? GO:0000981 ... P14859 10541551
    7565 1cqt:A (3.2) BS02 dna ? GO:0000981 ... P14859 10541551
    7566 1cqt:A (3.2) BS03 peptide ? GO:0000981 ... P14859 10541551
    7567 1cqt:B (3.2) BS01 dna ? GO:0000981 ... P14859 10541551
    7568 1cqt:B (3.2) BS02 dna ? GO:0000981 ... P14859 10541551
    7569 1cqt:B (3.2) BS03 peptide ? GO:0000981 ... P14859 10541551
    7570 1cqv:A (2.06) BS01 ZN ? GO:0005576 ... P34071 11526318
    7571 1cqw:A (1.5) BS01 IOD 3.8.1.5 GO:0003824 ... P59336 10587433
    7572 1cqw:A (1.5) BS02 IOD 3.8.1.5 GO:0003824 ... P59336 10587433
    7573 1cqx:A (1.75) BS01 HEM 1.14.12.17 GO:0005344 ... P39662 8557026
    7574 1cqx:A (1.75) BS02 FAD 1.14.12.17 GO:0005344 ... P39662 8557026
    7575 1cqx:B (1.75) BS01 HEM 1.14.12.17 GO:0005344 ... P39662 8557026
    7576 1cqx:B (1.75) BS02 FAD 1.14.12.17 GO:0005344 ... P39662 8557026
    7577 1cr1:A (2.3) BS01 TTP 2.7.7.-
    3.6.4.12
    GO:0003678 ... P03692 10535735
    7578 1cr2:A (2.3) BS01 DTP 2.7.7.-
    3.6.4.12
    GO:0003678 ... P03692 10535735
    7579 1cr4:A (2.5) BS01 TYD 2.7.7.-
    3.6.4.12
    GO:0003678 ... P03692 10535735
    7580 1cr5:A (2.3) BS01 NEN ? GO:0016887 ... P18759 10611286
    7581 1cr5:A (2.3) BS02 NEN ? GO:0016887 ... P18759 10611286
    7582 1cr5:B (2.3) BS01 NEN ? GO:0016887 ... P18759 10611286
    7583 1cr5:C (2.3) BS01 NEN ? GO:0016887 ... P18759 10611286
    7584 1cr5:C (2.3) BS02 NEN ? GO:0016887 ... P18759 10611286
    7585 1cr6:A (2.8) BS01 CPU 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34914 10485878
    7586 1cr6:B (2.8) BS01 CPU 3.1.3.76
    3.3.2.10
    GO:0000287 ... P34914 10485878
    7587 1cr7:A (2.6) BS01 GLC ? GO:0030246 ... P02872 11288176
    7588 1cr7:A (2.6) BS02 GAL ? GO:0030246 ... P02872 11288176
    7589 1cr7:A (2.6) BS03 CA ? GO:0030246 ... P02872 11288176
    7590 1cr7:A (2.6) BS04 MN ? GO:0030246 ... P02872 11288176
    7591 1cr7:B (2.6) BS01 GLC ? GO:0030246 ... P02872 11288176
    7592 1cr7:B (2.6) BS02 GAL ? GO:0030246 ... P02872 11288176
    7593 1cr7:B (2.6) BS03 CA ? GO:0030246 ... P02872 11288176
    7594 1cr7:B (2.6) BS04 MN ? GO:0030246 ... P02872 11288176
    7595 1cr7:C (2.6) BS01 CA ? GO:0030246 ... P02872 11288176
    7596 1cr7:C (2.6) BS02 MN ? GO:0030246 ... P02872 11288176
    7597 1cr7:D (2.6) BS01 CA ? GO:0030246 ... P02872 11288176
    7598 1cr7:D (2.6) BS02 MN ? GO:0030246 ... P02872 11288176
    7599 1cr7:E (2.6) BS01 GLC ? GO:0030246 ... P02872 11288176
    7600 1cr7:E (2.6) BS02 GAL ? GO:0030246 ... P02872 11288176

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).