SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 3790 3791 3792 3793 3794 3795 3796 3797 3798 3799 3800 3801 3802 3803 3804 3805 3806 3807 3808 3809 3810 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    759801 7yrg:H (4.2) BS02 dna ? GO:0000786 ... P02281 37536340
    759802 7yrg:K (4.2) BS01 dna 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759803 7yrg:K (4.2) BS02 ZN 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759804 7yrg:K (4.2) BS03 SAM 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759805 7yrg:L (4.2) BS01 dna 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759806 7yrg:L (4.2) BS02 dna 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759807 7yrg:L (4.2) BS03 ZN 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759808 7yrg:L (4.2) BS04 SAM 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37536340
    759809 7yri:A (2.61) BS01 SAM 2.1.1.- N/A Q9W138 N/A
    759810 7yri:C (2.61) BS01 SAM 2.1.1.- N/A Q9W138 N/A
    759811 7yri:D (2.61) BS01 SAM 2.1.1.- N/A Q9W138 N/A
    759812 7yri:J (2.61) BS01 SAM 2.1.1.- N/A Q9W138 N/A
    759813 7yrj:A (2.35) BS01 SFG 2.1.1.- N/A Q9W138 N/A
    759814 7yrj:B (2.35) BS01 SFG 2.1.1.- N/A Q9W138 N/A
    759815 7yrj:C (2.35) BS01 SFG 2.1.1.- N/A Q9W138 N/A
    759816 7yrj:D (2.35) BS01 SFG 2.1.1.- N/A Q9W138 N/A
    759817 7yrk:A (0.92) BS01 JI6 3.2.1.17 GO:0003796 ... P00698 37106030
    759818 7yrk:A (0.92) BS02 74C 3.2.1.17 GO:0003796 ... P00698 37106030
    759819 7yrp:A (2.0) BS01 ZN 3.5.2.6 GO:0008800 ... F8UTU0 N/A
    759820 7yrp:A (2.0) BS02 ZN 3.5.2.6 GO:0008800 ... F8UTU0 N/A
    759821 7yrp:B (2.0) BS01 ZN 3.5.2.6 GO:0008800 ... F8UTU0 N/A
    759822 7yrp:B (2.0) BS02 ZN 3.5.2.6 GO:0008800 ... F8UTU0 N/A
    759823 7yrq:A (3.35) BS01 K9G 3.1.2.-
    7.6.2.-
    GO:0000038 ... P33897 36810450
    759824 7yrq:B (3.35) BS01 K9G 3.1.2.-
    7.6.2.-
    GO:0000038 ... P33897 36810450
    759825 7yrs:A (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759826 7yrs:B (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759827 7yrs:C (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759828 7yrs:D (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759829 7yrs:E (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759830 7yrs:F (2.802) BS01 ZN 5.3.1.17 GO:0008270 ... C2JUP1 38239764
    759831 7yry:A (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A3M142 37318822
    759832 7yry:B (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A3M142 37318822
    759833 7yry:C (3.0) BS01 ATP 7.1.2.2 GO:0005524 ... A3M142 37318822
    759834 7yry:D (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A3M144 37318822
    759835 7yrz:A (1.79) BS01 4WI 2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X1 36965419
    759836 7yrz:B (1.79) BS01 4WI 2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6X1 36965419
    759837 7ys6:A (3.0) BS01 SRO ? GO:0004930 ... P50406 36989299
    759838 7ys8:A (2.02) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759839 7ys8:B (2.02) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759840 7ys9:A (1.65) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759841 7ys9:A (1.65) BS02 UPG 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759842 7ys9:A (1.65) BS03 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759843 7ys9:B (1.65) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759844 7ys9:B (1.65) BS02 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759845 7ysa:A (1.95) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759846 7ysa:A (1.95) BS02 UPG 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759847 7ysa:B (1.95) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759848 7ysa:B (1.95) BS02 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759849 7yse:A (2.907) BS01 rna 6.1.1.14 GO:0000166 ... P00960 36753552
    759850 7yse:A (2.907) BS02 JPO 6.1.1.14 GO:0000166 ... P00960 36753552
    759851 7yse:A (2.907) BS03 MG 6.1.1.14 GO:0000166 ... P00960 36753552
    759852 7yse:B (2.907) BS01 rna 6.1.1.14 GO:0000166 ... P00960 36753552
    759853 7yse:B (2.907) BS02 JPO 6.1.1.14 GO:0000166 ... P00960 36753552
    759854 7yse:B (2.907) BS03 MG 6.1.1.14 GO:0000166 ... P00960 36753552
    759855 7yse:C (2.907) BS01 rna 6.1.1.14 GO:0000049 ... P00961 36753552
    759856 7yse:D (2.907) BS01 rna 6.1.1.14 GO:0000049 ... P00961 36753552
    759857 7ysf:A (2.4) BS01 dna ? N/A Q96C55 38086788
    759858 7ysf:A (2.4) BS02 dna ? N/A Q96C55 38086788
    759859 7ysf:A (2.4) BS03 ZN ? N/A Q96C55 38086788
    759860 7ysf:A (2.4) BS04 ZN ? N/A Q96C55 38086788
    759861 7ysf:A (2.4) BS05 ZN ? N/A Q96C55 38086788
    759862 7ysf:A (2.4) BS06 ZN ? N/A Q96C55 38086788
    759863 7ysh:A (2.74) BS01 ZN 3.2.1.31 GO:0003085 ... Q9UEF7 37286607
    759864 7ysh:B (2.74) BS01 SGN ? GO:0005104 ... Q9GZV9 37286607
    759865 7ysh:D (2.74) BS01 SGN 2.7.10.1 N/A P11362 37286607
    759866 7ysh:E (2.74) BS01 IDS 2.7.10.1 N/A P11362 37286607
    759867 7ysh:E (2.74) BS02 SGN 2.7.10.1 N/A P11362 37286607
    759868 7ysi:A (1.202) BS01 ZN 1.8.1.8 GO:0005737 ... A0A219CD23 36752373
    759869 7ysi:A (1.202) BS02 ZN 1.8.1.8 GO:0005737 ... A0A219CD23 36752373
    759870 7ysm:A (1.87) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759871 7ysm:A (1.87) BS02 UD2 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759872 7ysm:B (1.87) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759873 7ysm:B (1.87) BS02 UD2 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759874 7ysn:A (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 37749104
    759875 7ysn:B (3.5) BS01 G2P ? GO:0000226 ... P02554 37749104
    759876 7yso:A (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 37749104
    759877 7yso:B (3.6) BS01 GDP ? GO:0000226 ... P02554 37749104
    759878 7ysp:A (3.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 37749104
    759879 7ysp:B (3.9) BS01 GDP ? GO:0000226 ... P02554 37749104
    759880 7ysq:A (6.8) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759881 7ysq:B (6.8) BS01 GSP ? GO:0000226 ... Q24560 37749104
    759882 7ysq:B (6.8) BS02 GTP ? GO:0000226 ... Q24560 37749104
    759883 7ysq:D (6.8) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759884 7ysq:E (6.8) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759885 7ysq:F (6.8) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759886 7ysq:G (6.8) BS01 GSP ? GO:0000226 ... Q24560 37749104
    759887 7ysq:H (6.8) BS01 GSP ? GO:0000226 ... Q24560 37749104
    759888 7ysq:I (6.8) BS01 GTP ? GO:0000226 ... Q24560 37749104
    759889 7ysq:I (6.8) BS02 GSP ? GO:0000226 ... Q24560 37749104
    759890 7ysr:A (4.3) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759891 7ysr:B (4.3) BS01 GSP ? GO:0000226 ... Q24560 37749104
    759892 7ysr:C (4.3) BS01 GTP 3.6.5.- GO:0000226 ... P06603 37749104
    759893 7ysr:D (4.3) BS01 GSP ? GO:0000226 ... Q24560 37749104
    759894 7yst:A (1.88) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759895 7yst:A (1.88) BS02 UPG 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759896 7yst:B (1.88) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759897 7yst:B (1.88) BS02 UPG 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759898 7yst:B (1.88) BS03 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759899 7ysu:A (3.2) BS01 ZN 3.2.1.31 GO:0003085 ... Q9UEF7 37286607
    759900 7ysu:B (3.2) BS01 SGN ? GO:0008083 ... Q9GZV9 37286607
    759901 7ysu:C (3.2) BS01 IDS 2.7.10.1 N/A P22607 37286607
    759902 7ysu:C (3.2) BS02 SGN 2.7.10.1 N/A P22607 37286607
    759903 7ysu:C (3.2) BS03 IDS 2.7.10.1 N/A P22607 37286607
    759904 7ysu:E (3.2) BS01 SGN 2.7.10.1 N/A P22607 37286607
    759905 7ysu:E (3.2) BS02 SGN 2.7.10.1 N/A P22607 37286607
    759906 7ysu:E (3.2) BS03 IDS 2.7.10.1 N/A P22607 37286607
    759907 7ysu:E (3.2) BS04 SGN 2.7.10.1 N/A P22607 37286607
    759908 7ysu:E (3.2) BS05 CU 2.7.10.1 N/A P22607 37286607
    759909 7ysw:A (3.03) BS01 ZN 3.2.1.31 GO:0003085 ... Q9UEF7 37286607
    759910 7ysw:B (3.03) BS01 SGN ? GO:0008083 ... Q9GZV9 37286607
    759911 7ysw:C (3.03) BS01 IDS 2.7.10.1 N/A P22455 37286607
    759912 7ysw:C (3.03) BS02 SGN 2.7.10.1 N/A P22455 37286607
    759913 7ysw:C (3.03) BS03 IDS 2.7.10.1 N/A P22455 37286607
    759914 7ysw:E (3.03) BS01 SGN 2.7.10.1 N/A P22455 37286607
    759915 7ysw:E (3.03) BS02 SGN 2.7.10.1 N/A P22455 37286607
    759916 7ysw:E (3.03) BS03 SGN 2.7.10.1 N/A P22455 37286607
    759917 7ysx:A (1.65) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 37094153
    759918 7ysx:A (1.65) BS02 JU3 3.1.4.53 GO:0004114 ... Q08499 37094153
    759919 7ysx:B (1.65) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 37094153
    759920 7ysx:B (1.65) BS02 JU3 3.1.4.53 GO:0004114 ... Q08499 37094153
    759921 7ysy:A (2.16) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759922 7ysy:A (2.16) BS02 UD2 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759923 7ysy:B (2.16) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759924 7ysy:B (2.16) BS02 UD2 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759925 7ysz:A (2.30004) BS01 GDP ? GO:0003924 ... N/A 38718863
    759926 7ysz:A (2.30004) BS02 GDP ? GO:0003924 ... N/A 38718863
    759927 7ysz:B (2.30004) BS01 GDP ? GO:0003924 ... N/A 38718863
    759928 7ysz:B (2.30004) BS02 GDP ? GO:0003924 ... N/A 38718863
    759929 7yt0:A (1.76) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759930 7yt0:A (1.76) BS02 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759931 7yt0:B (1.76) BS01 NAD 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759932 7yt0:B (1.76) BS02 GDU 5.1.3.2 GO:0003978 ... P9WN67 N/A
    759933 7yta:A (2.31) BS01 peptide ? N/A A0A1S4CD29 36149781
    759934 7yta:B (2.31) BS01 peptide ? N/A A0A1S4CD29 36149781
    759935 7yta:C (2.31) BS01 peptide ? N/A A0A1S4CD29 36149781
    759936 7ytb:A (3.0) BS01 RET ? GO:0005216 ... A0A977XLG0 36859551
    759937 7ytb:B (3.0) BS01 RET ? GO:0005216 ... A0A977XLG0 36859551
    759938 7ytf:A (2.65) BS01 45D ? GO:0016037 ... A0A2K8SVQ4 37070859
    759939 7ytj:D (3.0) BS01 IHP 2.7.4.1 GO:0000329 ... P47075 36759618
    759940 7ytj:D (3.0) BS02 IHP 2.7.4.1 GO:0000329 ... P47075 36759618
    759941 7ytj:D (3.0) BS03 IHP 2.7.4.1 GO:0000329 ... P47075 36759618
    759942 7ytj:E (3.0) BS01 IHP ? GO:0000329 ... Q02725 36759618
    759943 7ytl:A (2.62) BS01 FAD ? GO:0003677 ... E1BR24 37739943
    759944 7ytl:A (2.62) BS02 UQ1 ? GO:0003677 ... E1BR24 37739943
    759945 7ytp:A (2.77) BS01 JRI ? GO:0019865 ... B3Y653 37544422
    759946 7ytp:A (2.77) BS02 JRI ? GO:0019865 ... B3Y653 37544422
    759947 7ytp:B (2.77) BS01 JRI ? GO:0019865 ... B3Y653 37544422
    759948 7ytp:B (2.77) BS02 JRI ? GO:0019865 ... B3Y653 37544422
    759949 7ytq:A (1.6) BS01 peptide ? N/A Q9UJ71 N/A
    759950 7ytq:A (1.6) BS02 CA ? N/A Q9UJ71 N/A
    759951 7ytq:A (1.6) BS03 JMI ? N/A Q9UJ71 N/A
    759952 7ytq:B (1.6) BS01 peptide ? N/A Q9UJ71 N/A
    759953 7ytq:B (1.6) BS02 CA ? N/A Q9UJ71 N/A
    759954 7ytq:B (1.6) BS03 JMI ? N/A Q9UJ71 N/A
    759955 7ytq:C (1.6) BS01 TRP ? N/A Q9UJ71 N/A
    759956 7ytq:C (1.6) BS02 CA ? N/A Q9UJ71 N/A
    759957 7ytq:C (1.6) BS03 JMI ? N/A Q9UJ71 N/A
    759958 7ytq:C (1.6) BS04 TRP ? N/A Q9UJ71 N/A
    759959 7ytq:D (1.6) BS01 TRP ? N/A Q9UJ71 N/A
    759960 7ytq:D (1.6) BS02 TRP ? N/A Q9UJ71 N/A
    759961 7ytq:D (1.6) BS03 CA ? N/A Q9UJ71 N/A
    759962 7ytq:D (1.6) BS04 JMI ? N/A Q9UJ71 N/A
    759963 7ytv:A (3.866) BS01 NAP 1.8.1.9 GO:0004791 ... A0A229Y1X4 37037064
    759964 7ytv:A (3.866) BS02 FAD 1.8.1.9 GO:0004791 ... A0A229Y1X4 37037064
    759965 7ytv:B (3.866) BS01 NAP 1.8.1.9 GO:0004791 ... A0A229Y1X4 37037064
    759966 7ytv:B (3.866) BS02 FAD 1.8.1.9 GO:0004791 ... A0A229Y1X4 37037064
    759967 7ytw:A (3.2) BS01 NA ? GO:0005737 ... Q9Z2J0 36914666
    759968 7ytw:A (3.2) BS02 NA ? GO:0005737 ... Q9Z2J0 36914666
    759969 7ytw:A (3.2) BS03 ASC ? GO:0005737 ... Q9Z2J0 36914666
    759970 7ytw:B (3.2) BS01 NA ? GO:0005737 ... Q9Z2J0 36914666
    759971 7ytw:B (3.2) BS02 NA ? GO:0005737 ... Q9Z2J0 36914666
    759972 7ytw:B (3.2) BS03 ASC ? GO:0005737 ... Q9Z2J0 36914666
    759973 7ytx:A (2.9) BS01 JRI ? GO:0002224 ... Q9NR97 37544422
    759974 7ytx:A (2.9) BS02 JRI ? GO:0002224 ... Q9NR97 37544422
    759975 7ytx:B (2.9) BS01 JRI ? GO:0002224 ... Q9NR97 37544422
    759976 7ytx:B (2.9) BS02 JRI ? GO:0002224 ... Q9NR97 37544422
    759977 7yu3:R (3.5) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759978 7yu4:A (3.7) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759979 7yu5:R (3.7) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759980 7yu6:R (3.9) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759981 7yu7:R (4.5) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759982 7yu8:R (5.6) BS01 K6L ? GO:0001965 ... Q92633 36109516
    759983 7yua:A (2.5) BS01 GDP ? N/A G8HX37 N/A
    759984 7yua:A (2.5) BS02 MG ? N/A G8HX37 N/A
    759985 7yua:A (2.5) BS03 MG ? N/A G8HX37 N/A
    759986 7yua:A (2.5) BS04 MG ? N/A G8HX37 N/A
    759987 7yua:B (2.5) BS01 GDP ? N/A G8HX37 N/A
    759988 7yua:B (2.5) BS02 MG ? N/A G8HX37 N/A
    759989 7yua:B (2.5) BS03 MG ? N/A G8HX37 N/A
    759990 7yua:B (2.5) BS04 MG ? N/A G8HX37 N/A
    759991 7yua:C (2.5) BS01 GDP ? N/A G8HX37 N/A
    759992 7yua:C (2.5) BS02 MG ? N/A G8HX37 N/A
    759993 7yua:D (2.5) BS01 GDP ? N/A G8HX37 N/A
    759994 7yua:D (2.5) BS02 MG ? N/A G8HX37 N/A
    759995 7yua:D (2.5) BS03 MG ? N/A G8HX37 N/A
    759996 7yub:R (3.22) BS01 S1P ? GO:0002920 ... Q8IVW8 38123825
    759997 7yud:R (2.98) BS01 J89 ? GO:0002920 ... Q8IVW8 38123825
    759998 7yue:A (2.35) BS01 peptide N/A N/A N/A 36691733
    759999 7yui:B (2.599) BS01 ZN 2.3.2.31 N/A Q9BYM8 37831767
    760000 7yui:B (2.599) BS02 ZN 2.3.2.31 N/A Q9BYM8 37831767

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).