SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    759801 7zjw:SH (2.8) BS02 ZN ? GO:0002181 ... G1U7M4 35709277
    759802 7zjw:SL (2.8) BS01 rna ? GO:0000028 ... G1TLT8 35709277
    759803 7zjw:SM (2.8) BS01 rna ? GO:0003735 ... G1SS70 35709277
    759804 7zjw:SN (2.8) BS01 rna ? GO:0003723 ... O18789 35709277
    759805 7zjw:SN (2.8) BS02 rna ? GO:0003723 ... O18789 35709277
    759806 7zjw:SO (2.8) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 35709277
    759807 7zjw:SP (2.8) BS01 rna ? GO:0003723 ... Q76N24 35709277
    759808 7zjw:SQ (2.8) BS01 rna ? GO:0003723 ... A0A5F9DBR8 35709277
    759809 7zjw:SQ (2.8) BS02 rna ? GO:0003723 ... A0A5F9DBR8 35709277
    759810 7zjw:SR (2.8) BS01 rna ? GO:0000082 ... P62753 35709277
    759811 7zjw:SS (2.8) BS01 rna ? GO:0003735 ... G1SVB0 35709277
    759812 7zjw:ST (2.8) BS01 rna ? GO:0000462 ... Q5E958 35709277
    759813 7zjw:ST (2.8) BS02 rna ? GO:0000462 ... Q5E958 35709277
    759814 7zjw:SU (2.8) BS01 rna ? GO:0003723 ... B7NZS8 35709277
    759815 7zjw:SV (2.8) BS01 rna ? GO:0003723 ... G1TPV3 35709277
    759816 7zjw:SW (2.8) BS01 rna ? GO:0003735 ... G1TRM4 35709277
    759817 7zjw:SX (2.8) BS01 rna ? GO:0003735 ... G1SFR8 35709277
    759818 7zjw:SY (2.8) BS01 rna ? GO:0003729 ... A0A663F1C0 35709277
    759819 7zjw:SZ (2.8) BS01 rna ? GO:0003735 ... A0A7L0BEC6 35709277
    759820 7zjw:Sa (2.8) BS01 rna ? GO:0000028 ... G1U0Q2 35709277
    759821 7zjw:Sa (2.8) BS02 rna ? GO:0000028 ... G1U0Q2 35709277
    759822 7zjw:Sa (2.8) BS03 rna ? GO:0000028 ... G1U0Q2 35709277
    759823 7zjw:Sb (2.8) BS01 rna ? GO:0000462 ... G1SGX4 35709277
    759824 7zjw:Sc (2.8) BS01 rna ? GO:0003735 ... G1TU13 35709277
    759825 7zjw:Sd (2.8) BS01 rna ? GO:0003676 ... H0WTR0 35709277
    759826 7zjw:Sd (2.8) BS02 rna ? GO:0003676 ... H0WTR0 35709277
    759827 7zjw:Se (2.8) BS01 rna ? GO:0000028 ... A0A2Y9E7Q1 35709277
    759828 7zjw:Sf (2.8) BS01 rna ? GO:0003723 ... G1SIZ2 35709277
    759829 7zjw:Sh (2.8) BS01 rna ? GO:0003735 ... G1TG89 35709277
    759830 7zjw:Si (2.8) BS01 rna ? GO:0003735 ... G1SZ47 35709277
    759831 7zjw:Si (2.8) BS02 rna ? GO:0003735 ... G1SZ47 35709277
    759832 7zjw:Sj (2.8) BS01 rna ? GO:0003735 ... A0A6J1UT65 35709277
    759833 7zjw:Sk (2.8) BS01 rna ? GO:0005840 ... A0A2U4BVW1 35709277
    759834 7zjx:B (3.1) BS01 rna ? GO:0001514 ... Q96T21 35709277
    759835 7zjx:B (3.1) BS02 rna ? GO:0001514 ... Q96T21 35709277
    759836 7zjx:LD (3.1) BS01 rna ? GO:0002181 ... A0A8B8VPA8 35709277
    759837 7zjx:LD (3.1) BS02 rna ? GO:0002181 ... A0A8B8VPA8 35709277
    759838 7zjx:LE (3.1) BS01 rna ? GO:0003723 ... G1TL06 35709277
    759839 7zjx:LF (3.1) BS01 rna ? GO:0003735 ... G1SVW5 35709277
    759840 7zjx:LF (3.1) BS02 rna ? GO:0003735 ... G1SVW5 35709277
    759841 7zjx:LG (3.1) BS01 rna ? GO:0000027 ... P19949 35709277
    759842 7zjx:LG (3.1) BS02 rna ? GO:0000027 ... P19949 35709277
    759843 7zjx:LH (3.1) BS01 rna ? GO:0000027 ... G1SKF7 35709277
    759844 7zjx:LI (3.1) BS01 rna ? GO:0000463 ... A0A7J8C453 35709277
    759845 7zjx:LI (3.1) BS02 rna ? GO:0000463 ... A0A7J8C453 35709277
    759846 7zjx:LJ (3.1) BS01 rna ? GO:0000470 ... P62424 35709277
    759847 7zjx:LJ (3.1) BS02 rna ? GO:0000470 ... P62424 35709277
    759848 7zjx:LK (3.1) BS01 rna ? GO:0002181 ... G1SWI6 35709277
    759849 7zjx:LL (3.1) BS01 rna ? GO:0003735 ... B7NZQ2 35709277
    759850 7zjx:LL (3.1) BS02 rna ? GO:0003735 ... B7NZQ2 35709277
    759851 7zjx:LM (3.1) BS01 rna ? GO:0003735 ... G1TUB8 35709277
    759852 7zjx:LM (3.1) BS02 rna ? GO:0003735 ... G1TUB8 35709277
    759853 7zjx:LO (3.1) BS01 rna ? GO:0003723 ... G1TKB3 35709277
    759854 7zjx:LO (3.1) BS02 rna ? GO:0003723 ... G1TKB3 35709277
    759855 7zjx:LP (3.1) BS01 rna ? GO:0003723 ... G1SZ12 35709277
    759856 7zjx:LQ (3.1) BS01 rna ? GO:0002181 ... G1T0C1 35709277
    759857 7zjx:LQ (3.1) BS02 rna ? GO:0002181 ... G1T0C1 35709277
    759858 7zjx:LR (3.1) BS01 rna ? GO:0003729 ... A0A0N8ETI8 35709277
    759859 7zjx:LS (3.1) BS01 rna ? GO:0002181 ... A0A8J4KQ25 35709277
    759860 7zjx:LS (3.1) BS02 rna ? GO:0002181 ... A0A8J4KQ25 35709277
    759861 7zjx:LT (3.1) BS01 rna ? GO:0003723 ... F6QKI9 35709277
    759862 7zjx:LU (3.1) BS01 rna ? GO:0003723 ... A0A2J8KH59 35709277
    759863 7zjx:LU (3.1) BS02 rna ? GO:0003723 ... A0A2J8KH59 35709277
    759864 7zjx:LV (3.1) BS01 rna ? GO:0003735 ... A0A1Z5LHJ5 35709277
    759865 7zjx:LV (3.1) BS02 rna ? GO:0003735 ... A0A1Z5LHJ5 35709277
    759866 7zjx:LW (3.1) BS01 rna ? GO:0003735 ... G1SHQ2 35709277
    759867 7zjx:LW (3.1) BS02 rna ? GO:0003735 ... G1SHQ2 35709277
    759868 7zjx:LX (3.1) BS01 rna ? GO:0002181 ... Q4R5I3 35709277
    759869 7zjx:LY (3.1) BS01 rna ? GO:0003735 ... A0A3P9HH38 35709277
    759870 7zjx:LZ (3.1) BS01 rna ? GO:0000027 ... G1SE28 35709277
    759871 7zjx:LZ (3.1) BS02 rna ? GO:0000027 ... G1SE28 35709277
    759872 7zjx:La (3.1) BS01 rna ? GO:0003735 ... G1SE76 35709277
    759873 7zjx:La (3.1) BS02 rna ? GO:0003735 ... G1SE76 35709277
    759874 7zjx:Lb (3.1) BS01 rna ? GO:0003723 ... A0A5N3X333 35709277
    759875 7zjx:Lb (3.1) BS02 rna ? GO:0003723 ... A0A5N3X333 35709277
    759876 7zjx:Lc (3.1) BS01 rna ? GO:0003735 ... A0A851LWS6 35709277
    759877 7zjx:Ld (3.1) BS01 rna ? GO:0003735 ... G1SNY0 35709277
    759878 7zjx:Le (3.1) BS01 rna ? GO:0002181 ... G1SGR6 35709277
    759879 7zjx:Lf (3.1) BS01 rna ? GO:0002181 ... G1TDL2 35709277
    759880 7zjx:Lg (3.1) BS01 rna ? GO:0002181 ... G1SHG0 35709277
    759881 7zjx:Lh (3.1) BS01 rna ? GO:0003735 ... G1TUN8 35709277
    759882 7zjx:Li (3.1) BS01 rna ? GO:0000049 ... G1SF08 35709277
    759883 7zjx:Lj (3.1) BS01 rna ? GO:0003735 ... G1TXG5 35709277
    759884 7zjx:Lj (3.1) BS02 ZN ? GO:0003735 ... G1TXG5 35709277
    759885 7zjx:Lk (3.1) BS01 rna ? GO:0000463 ... G1SIT5 35709277
    759886 7zjx:Lk (3.1) BS02 rna ? GO:0000463 ... G1SIT5 35709277
    759887 7zjx:Ll (3.1) BS01 rna ? GO:0002181 ... A0A1S3FQR5 35709277
    759888 7zjx:Lm (3.1) BS01 rna ? GO:0003723 ... U3KPD5 35709277
    759889 7zjx:Lm (3.1) BS02 rna ? GO:0003723 ... U3KPD5 35709277
    759890 7zjx:Lm (3.1) BS03 ZN ? GO:0003723 ... U3KPD5 35709277
    759891 7zjx:Ln (3.1) BS01 rna ? GO:0003735 ... A0A1A7W9T9 35709277
    759892 7zjx:Lo (3.1) BS01 rna ? GO:0003735 ... G1TTN1 35709277
    759893 7zjx:Lo (3.1) BS02 rna ? GO:0003735 ... G1TTN1 35709277
    759894 7zjx:Lp (3.1) BS01 rna ? GO:0002181 ... A0A8C8Y9V5 35709277
    759895 7zjx:Lp (3.1) BS02 ZN ? GO:0002181 ... A0A8C8Y9V5 35709277
    759896 7zjx:Lq (3.1) BS01 rna ? GO:0003735 ... A0A7J7V6K8 35709277
    759897 7zjx:Lq (3.1) BS02 ZN ? GO:0003735 ... A0A7J7V6K8 35709277
    759898 7zjx:Lr (3.1) BS01 rna ? GO:0003735 ... A0A6I9ZMF9 35709277
    759899 7zjx:Lr (3.1) BS02 ZN ? GO:0003735 ... A0A6I9ZMF9 35709277
    759900 7zjx:Ls (3.1) BS01 rna ? GO:0003735 ... A0A4U1EJN3 35709277
    759901 7zjx:Lx (3.1) BS01 rna ? GO:0003723 ... G1SKZ8 35709277
    759902 7zjx:SB (3.1) BS01 rna ? GO:0003735 ... A0A7J8BG50 35709277
    759903 7zjx:SC (3.1) BS01 rna ? GO:0000028 ... A0A3M0JHZ8 35709277
    759904 7zjx:SD (3.1) BS01 rna ? GO:0003735 ... A0A8C0T835 35709277
    759905 7zjx:SD (3.1) BS02 rna ? GO:0003735 ... A0A8C0T835 35709277
    759906 7zjx:SD (3.1) BS03 ZN ? GO:0003735 ... A0A8C0T835 35709277
    759907 7zjx:SE (3.1) BS01 rna ? GO:0003735 ... G1T8A2 35709277
    759908 7zjx:SF (3.1) BS01 rna ? GO:0003729 ... A0A2K5LQY6 35709277
    759909 7zjx:SF (3.1) BS02 ZN ? GO:0003729 ... A0A2K5LQY6 35709277
    759910 7zjx:SG (3.1) BS01 rna ? GO:0005840 ... A0A2K6K8B0 35709277
    759911 7zjx:SH (3.1) BS01 rna ? GO:0002181 ... G1U7M4 35709277
    759912 7zjx:SH (3.1) BS02 ZN ? GO:0002181 ... G1U7M4 35709277
    759913 7zjx:SL (3.1) BS01 rna ? GO:0000028 ... G1TLT8 35709277
    759914 7zjx:SM (3.1) BS01 rna ? GO:0003735 ... G1SS70 35709277
    759915 7zjx:SM (3.1) BS02 rna ? GO:0003735 ... G1SS70 35709277
    759916 7zjx:SN (3.1) BS01 rna ? GO:0003723 ... O18789 35709277
    759917 7zjx:SO (3.1) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 35709277
    759918 7zjx:SP (3.1) BS01 rna ? GO:0003723 ... Q76N24 35709277
    759919 7zjx:SQ (3.1) BS01 rna ? GO:0003723 ... A0A5F9DBR8 35709277
    759920 7zjx:SQ (3.1) BS02 rna ? GO:0003723 ... A0A5F9DBR8 35709277
    759921 7zjx:SR (3.1) BS01 rna ? GO:0000082 ... P62753 35709277
    759922 7zjx:SS (3.1) BS01 rna ? GO:0003735 ... G1SVB0 35709277
    759923 7zjx:ST (3.1) BS01 rna ? GO:0000462 ... Q5E958 35709277
    759924 7zjx:ST (3.1) BS02 rna ? GO:0000462 ... Q5E958 35709277
    759925 7zjx:SU (3.1) BS01 rna ? GO:0003723 ... B7NZS8 35709277
    759926 7zjx:SV (3.1) BS01 rna ? GO:0003723 ... G1TPV3 35709277
    759927 7zjx:SW (3.1) BS01 rna ? GO:0003735 ... G1TRM4 35709277
    759928 7zjx:SX (3.1) BS01 rna ? GO:0003735 ... G1SFR8 35709277
    759929 7zjx:SY (3.1) BS01 rna ? GO:0003729 ... A0A663F1C0 35709277
    759930 7zjx:SY (3.1) BS02 rna ? GO:0003729 ... A0A663F1C0 35709277
    759931 7zjx:SZ (3.1) BS01 rna ? GO:0003735 ... A0A7L0BEC6 35709277
    759932 7zjx:SZ (3.1) BS02 rna ? GO:0003735 ... A0A7L0BEC6 35709277
    759933 7zjx:Sa (3.1) BS01 rna ? GO:0000028 ... G1U0Q2 35709277
    759934 7zjx:Sb (3.1) BS01 rna ? GO:0000462 ... G1SGX4 35709277
    759935 7zjx:Sc (3.1) BS01 rna ? GO:0003735 ... G1TU13 35709277
    759936 7zjx:Sd (3.1) BS01 rna ? GO:0003676 ... H0WTR0 35709277
    759937 7zjx:Se (3.1) BS01 rna ? GO:0000028 ... A0A2Y9E7Q1 35709277
    759938 7zjx:Sf (3.1) BS01 rna ? GO:0003723 ... G1SIZ2 35709277
    759939 7zjx:Sh (3.1) BS01 rna ? GO:0003735 ... G1TG89 35709277
    759940 7zjx:Si (3.1) BS01 rna ? GO:0003735 ... G1SZ47 35709277
    759941 7zjx:Sj (3.1) BS01 rna ? GO:0003735 ... A0A6J1UT65 35709277
    759942 7zjx:Sk (3.1) BS01 rna ? GO:0005840 ... A0A2U4BVW1 35709277
    759943 7zjx:Sk (3.1) BS02 rna ? GO:0005840 ... A0A2U4BVW1 35709277
    759944 7zk2:A (1.6) BS01 IU4 ? GO:0000978 ... O15178 N/A
    759945 7zk3:A (2.85) BS01 CA ? GO:0005229 ... Q8BHY3 35589730
    759946 7zk3:A (2.85) BS02 CA ? GO:0005229 ... Q8BHY3 35589730
    759947 7zk3:A (2.85) BS03 JRF ? GO:0005229 ... Q8BHY3 35589730
    759948 7zk3:A (2.85) BS04 CA ? GO:0005229 ... Q8BHY3 35589730
    759949 7zk3:B (2.85) BS01 CA ? GO:0005229 ... Q8BHY3 35589730
    759950 7zk3:B (2.85) BS02 CA ? GO:0005229 ... Q8BHY3 35589730
    759951 7zk3:B (2.85) BS03 JRF ? GO:0005229 ... Q8BHY3 35589730
    759952 7zk3:B (2.85) BS04 CA ? GO:0005229 ... Q8BHY3 35589730
    759953 7zk4:A (2.6) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759954 7zk4:A (2.6) BS02 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759955 7zk4:A (2.6) BS03 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759956 7zk4:A (2.6) BS04 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759957 7zk4:A (2.6) BS05 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759958 7zk4:A (2.6) BS06 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759959 7zk4:A (2.6) BS07 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759960 7zk4:A (2.6) BS08 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759961 7zk4:A (2.6) BS09 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759962 7zk5:A (2.6) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759963 7zk5:A (2.6) BS02 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759964 7zk5:A (2.6) BS03 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759965 7zk5:A (2.6) BS04 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759966 7zk5:A (2.6) BS05 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759967 7zk5:A (2.6) BS06 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759968 7zk5:A (2.6) BS07 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759969 7zk5:A (2.6) BS08 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759970 7zk5:A (2.6) BS09 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759971 7zk6:A (3.1) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759972 7zk6:A (3.1) BS02 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759973 7zk6:A (3.1) BS03 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759974 7zk6:A (3.1) BS04 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759975 7zk6:A (3.1) BS05 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759976 7zk6:A (3.1) BS06 JJI 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759977 7zk6:A (3.1) BS07 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759978 7zk7:A () BS01 JJI N/A N/A N/A N/A
    759979 7zk7:A () BS02 JIZ N/A N/A N/A N/A
    759980 7zk7:A () BS03 Y01 N/A N/A N/A N/A
    759981 7zk7:A () BS04 Y01 N/A N/A N/A N/A
    759982 7zk8:A (3.0) BS01 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759983 7zk8:A (3.0) BS02 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759984 7zk8:A (3.0) BS03 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759985 7zk8:A (3.0) BS04 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759986 7zk8:A (3.0) BS05 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759987 7zk8:A (3.0) BS06 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759988 7zk8:A (3.0) BS07 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759989 7zk9:A (4.3) BS01 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759990 7zka:A (2.9) BS01 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759991 7zka:A (2.9) BS02 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759992 7zka:A (2.9) BS03 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759993 7zka:A (2.9) BS04 ATP 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759994 7zka:A (2.9) BS05 MG 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759995 7zka:A (2.9) BS06 LMN 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759996 7zka:A (2.9) BS07 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759997 7zka:A (2.9) BS08 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759998 7zka:A (2.9) BS09 Y01 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    759999 7zkb:A (4.7) BS01 JIZ 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172
    760000 7zkb:A (4.7) BS02 JJI 7.6.2.1
    7.6.2.2
    GO:0001666 ... P21447 38259172

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).