SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    760001 7yui:B (2.599) BS03 ZN 2.3.2.31 N/A Q9BYM8 37831767
    760002 7yui:B (2.599) BS04 ZN 2.3.2.31 N/A Q9BYM8 37831767
    760003 7yui:B (2.599) BS05 ZN 2.3.2.31 N/A Q9BYM8 37831767
    760004 7yuj:A (1.865) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760005 7yuj:A (1.865) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760006 7yuj:A (1.865) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760007 7yuj:A (1.865) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760008 7yuj:A (1.865) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760009 7yuj:B (1.865) BS01 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760010 7yuj:B (1.865) BS02 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760011 7yuj:B (1.865) BS03 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760012 7yuj:B (1.865) BS04 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760013 7yuj:B (1.865) BS05 ZN 2.3.2.31 GO:0008270 ... Q9BYM8 37831767
    760014 7yuk:A (2.11) BS01 dna ? GO:0003677 ... Q8N9N5 37086783
    760015 7yuk:A (2.11) BS02 dna ? GO:0003677 ... Q8N9N5 37086783
    760016 7yul:A (1.82) BS01 dna ? GO:0003677 ... Q5SZJ8 37086783
    760017 7yul:A (1.82) BS02 GOA ? GO:0003677 ... Q5SZJ8 37086783
    760018 7yun:A (2.13) BS01 dna ? GO:0003677 ... Q5SZJ8 37086783
    760019 7yun:A (2.13) BS02 dna ? GO:0003677 ... Q5SZJ8 37086783
    760020 7yun:B (2.13) BS01 dna ? GO:0003677 ... Q5SZJ8 37086783
    760021 7yun:B (2.13) BS02 dna ? GO:0003677 ... Q5SZJ8 37086783
    760022 7yuv:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760023 7yuv:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760024 7yuv:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760025 7yuw:A (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760026 7yuw:B (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760027 7yuw:C (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760028 7yuw:D (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760029 7yux:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760030 7yux:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760031 7yux:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760032 7yux:D (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760033 7yux:E (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    760034 7yuy:F (3.5) BS01 BGC 2.4.1.34 GO:0000148 ... P38631 36949198
    760035 7yuz:A (1.878) BS01 peptide 3.6.5.2 GO:0000139 ... P01116 37874670
    760036 7yuz:A (1.878) BS02 GDP 3.6.5.2 GO:0000139 ... P01116 37874670
    760037 7yv1:A (1.454) BS01 peptide 3.6.5.2 GO:0000139 ... P01116 37874670
    760038 7yv1:A (1.454) BS02 GDP 3.6.5.2 GO:0000139 ... P01116 37874670
    760039 7yv4:A (1.58) BS01 JXY 3.4.19.12 GO:0004843 ... P15374 37012254
    760040 7yv8:A (2.94) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A1U7QTA1 37479708
    760041 7yva:A (2.93) BS01 ZN 4.1.2.13 GO:0004332 ... Q9URB4 N/A
    760042 7yva:B (2.93) BS01 ZN 4.1.2.13 GO:0004332 ... Q9URB4 N/A
    760043 7yva:B (2.93) BS02 LPA 4.1.2.13 GO:0004332 ... Q9URB4 N/A
    760044 7yvb:A (3.0) BS01 peptide ? GO:0005272 ... Q4TZI8 37550431
    760045 7yvb:B (3.0) BS01 peptide ? GO:0005272 ... Q4TZI8 37550431
    760046 7yvb:C (3.0) BS01 peptide ? GO:0005272 ... Q4TZI8 37550431
    760047 7yvq:A (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760048 7yvq:A (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760049 7yvq:A (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760050 7yvq:B (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760051 7yvq:B (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760052 7yvq:B (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760053 7yvq:C (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760054 7yvq:C (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760055 7yvq:C (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760056 7yvq:D (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760057 7yvq:D (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760058 7yvq:D (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760059 7yvq:E (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760060 7yvq:E (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760061 7yvq:E (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760062 7yvq:F (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760063 7yvq:F (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760064 7yvq:F (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760065 7yvq:G (3.18) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760066 7yvq:G (3.18) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760067 7yvq:G (3.18) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760068 7yvs:A (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760069 7yvs:A (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760070 7yvs:A (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760071 7yvs:B (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760072 7yvs:B (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760073 7yvs:B (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760074 7yvs:C (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760075 7yvs:C (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760076 7yvs:C (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760077 7yvs:D (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760078 7yvs:D (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760079 7yvs:D (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760080 7yvs:E (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760081 7yvs:E (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760082 7yvs:E (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760083 7yvs:F (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760084 7yvs:F (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760085 7yvs:F (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760086 7yvs:G (2.8) BS01 CA ? GO:0005576 ... A8DS70 36253419
    760087 7yvs:G (2.8) BS02 CA ? GO:0005576 ... A8DS70 36253419
    760088 7yvs:G (2.8) BS03 CA ? GO:0005576 ... A8DS70 36253419
    760089 7yvu:A (3.2) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q8R0I0 37479708
    760090 7yvv:A (2.1) BS01 FE 1.13.11.27 GO:0003868 ... A0ACD6BAE5 N/A
    760091 7yvz:A (1.7) BS01 FES ? GO:0010506 ... A7LPG5 36533211
    760092 7yw2:A (2.23) BS01 HQG 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760093 7yw2:A (2.23) BS02 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760094 7yw2:A (2.23) BS03 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760095 7yw2:A (2.23) BS04 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760096 7yw2:A (2.23) BS05 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760097 7yw2:A (2.23) BS06 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760098 7yw2:A (2.23) BS07 SOR 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760099 7yw2:A (2.23) BS08 SOR 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760100 7yw2:A (2.23) BS09 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760101 7yw2:A (2.23) BS10 GLY 2.7.1.160 GO:0000215 ... Q8K3A2 37334830
    760102 7yw3:A (2.5) BS01 HQG 2.7.1.160 GO:0000215 ... Q86TN4 37334830
    760103 7yw4:A (2.18) BS01 NAD 2.7.1.160 GO:0000215 ... Q12272 37334830
    760104 7yw9:A (1.76) BS01 DAR ? GO:0005506 ... A6YEH4 36176888
    760105 7ywa:F (3.26) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    760106 7ywa:F (3.26) BS02 AGS ? GO:0000150 ... P0A7G6 36598938
    760107 7ywa:F (3.26) BS03 AGS ? GO:0000150 ... P0A7G6 36598938
    760108 7ywa:G (3.26) BS01 dna ? GO:0000150 ... P0A7G6 36598938
    760109 7ywa:G (3.26) BS02 AGS ? GO:0000150 ... P0A7G6 36598938
    760110 7ywb:A (1.92) BS01 N6M ? GO:0003723 ... Q9Y5A9 36110386
    760111 7ywb:B (1.92) BS01 N6M ? GO:0003723 ... Q9Y5A9 36110386
    760112 7ywc:A (1.917) BS01 ISJ 4.2.1.151 GO:0009234 ... Q9L0T8 36265588
    760113 7ywc:B (1.917) BS01 ISJ 4.2.1.151 GO:0009234 ... Q9L0T8 36265588
    760114 7ywf:A (2.6) BS01 GAL ? N/A Q306J3 36009020
    760115 7ywf:A (2.6) BS02 GAL ? N/A Q306J3 36009020
    760116 7ywf:B (2.6) BS01 GAL ? N/A Q306J3 36009020
    760117 7ywf:B (2.6) BS02 GAL ? N/A Q306J3 36009020
    760118 7ywf:C (2.6) BS01 GAL ? N/A Q306J3 36009020
    760119 7ywk:A (1.39) BS01 AMP 5.1.1.11 N/A P09095 36070491
    760120 7ywk:B (1.39) BS01 AMP 5.1.1.11 N/A P09095 36070491
    760121 7ywm:A (1.624) BS01 ATP 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    760122 7ywm:B (1.624) BS01 ATP 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    760123 7ywm:C (1.624) BS01 ATP 2.7.7.3 GO:0003824 ... B1MDL6 35712348
    760124 7ywp:A (2.2) BS01 TCK 3.4.21.83 GO:0004252 ... B3VI58 36768612
    760125 7ywt:AAA (1.106) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 35635137
    760126 7ywt:AAA (1.106) BS02 I6U 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 35635137
    760127 7ywu:A (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760128 7ywu:A (2.8) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760129 7ywu:B (2.8) BS01 I7I 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760130 7ywu:C (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760131 7ywu:C (2.8) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760132 7ywu:D (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760133 7ywu:D (2.8) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760134 7ywu:E (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760135 7ywu:E (2.8) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760136 7ywu:F (2.8) BS01 I7I 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760137 7ywu:G (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760138 7ywu:G (2.8) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760139 7ywu:H (2.8) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760140 7ywv:A (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760141 7ywv:A (2.4) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760142 7ywv:B (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760143 7ywv:B (2.4) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760144 7ywv:B (2.4) BS03 CA 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760145 7ywv:C (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760146 7ywv:C (2.4) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760147 7ywv:D (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760148 7ywv:D (2.4) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760149 7ywv:E (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760150 7ywv:E (2.4) BS02 EOL 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760151 7ywv:F (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760152 7ywv:G (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760153 7ywv:H (2.4) BS01 FAD 1.1.3.38 GO:0003824 ... Q0SBK1 36418310
    760154 7ywx:A (12.0) BS01 dna ? GO:0000132 ... P49450 35420891
    760155 7ywx:A (12.0) BS02 dna ? GO:0000132 ... P49450 35420891
    760156 7ywx:B (12.0) BS01 dna ? GO:0000781 ... P62805 35420891
    760157 7ywx:B (12.0) BS02 dna ? GO:0000781 ... P62805 35420891
    760158 7ywx:C (12.0) BS01 dna ? GO:0000786 ... Q93077 35420891
    760159 7ywx:C (12.0) BS02 dna ? GO:0000786 ... Q93077 35420891
    760160 7ywx:D (12.0) BS01 dna ? GO:0000786 ... P62807 35420891
    760161 7ywx:E (12.0) BS01 dna ? GO:0000132 ... P49450 35420891
    760162 7ywx:E (12.0) BS02 dna ? GO:0000132 ... P49450 35420891
    760163 7ywx:E (12.0) BS03 peptide ? GO:0000132 ... P49450 35420891
    760164 7ywx:F (12.0) BS01 dna ? GO:0000781 ... P62805 35420891
    760165 7ywx:G (12.0) BS01 dna ? GO:0000786 ... Q93077 35420891
    760166 7ywx:G (12.0) BS02 dna ? GO:0000786 ... Q93077 35420891
    760167 7ywx:G (12.0) BS03 peptide ? GO:0000786 ... Q93077 35420891
    760168 7ywx:N (12.0) BS01 dna ? GO:0005634 ... Q96H22 35420891
    760169 7ywx:V (12.0) BS01 dna ? GO:0000786 ... P62807 35420891
    760170 7ywx:W (12.0) BS01 dna ? GO:0000278 ... Q5EE01 35420891
    760171 7yx0:A (1.6) BS01 FMN ? N/A C3K1W0 38280482
    760172 7yx0:A (1.6) BS02 JGC ? N/A C3K1W0 38280482
    760173 7yx0:C (1.6) BS01 FMN ? N/A C3K1W0 38280482
    760174 7yx0:C (1.6) BS02 JGC ? N/A C3K1W0 38280482
    760175 7yx1:A (2.65) BS01 BLA ? GO:0000302 ... A0A1D5B367 35919616
    760176 7yx1:B (2.65) BS01 BLA ? GO:0000302 ... A0A1D5B367 35919616
    760177 7yx3:A (4.0) BS01 FAD 1.-.-.- GO:0016491 ... Q5UPL2 35900198
    760178 7yx3:B (4.0) BS01 FAD 1.-.-.- GO:0016491 ... Q5UPL2 35900198
    760179 7yx4:A (3.7) BS01 FAD ? GO:0000166 ... E5L7Z5 35900198
    760180 7yx4:B (3.7) BS01 FAD ? GO:0000166 ... E5L7Z5 35900198
    760181 7yx5:A (3.7) BS01 FAD ? GO:0000166 ... E5L7Z5 35900198
    760182 7yx6:A (1.8) BS01 I6R ? GO:0003723 ... Q9Y5A9 36110386
    760183 7yx6:B (1.8) BS01 I6R ? GO:0003723 ... Q9Y5A9 36110386
    760184 7yx8:A (1.5) BS01 peptide ? N/A B2UPI7 35882872
    760185 7yx8:A (1.5) BS02 peptide ? N/A B2UPI7 35882872
    760186 7yx8:A (1.5) BS03 GAL ? N/A B2UPI7 35882872
    760187 7yx8:A (1.5) BS04 ZN ? N/A B2UPI7 35882872
    760188 7yx8:B (1.5) BS01 peptide ? N/A B2UPI7 35882872
    760189 7yx8:B (1.5) BS02 peptide ? N/A B2UPI7 35882872
    760190 7yx8:B (1.5) BS03 GAL ? N/A B2UPI7 35882872
    760191 7yx8:B (1.5) BS04 ZN ? N/A B2UPI7 35882872
    760192 7yx9:A (1.76) BS01 peptide ? GO:0006955 ... P01903 37142807
    760193 7yx9:B (1.76) BS01 peptide ? GO:0006955 ... A0A4E9DJJ3 37142807
    760194 7yx9:C (1.76) BS01 peptide ? GO:0006955 ... P01903 37142807
    760195 7yx9:D (1.76) BS01 peptide ? GO:0006955 ... A0A4E9DJJ3 37142807
    760196 7yxa:A (2.2) BS01 B2O ? GO:0004930 ... P0ABE7
    Q9H228
    35961984
    760197 7yxa:B (2.2) BS01 B2O ? GO:0004930 ... P0ABE7
    Q9H228
    35961984
    760198 7yxb:A (2.095) BS01 peptide ? GO:0006955 ... P01903 37142807
    760199 7yxb:B (2.095) BS01 peptide ? GO:0006955 ... A0A1V1IGJ9 37142807
    760200 7yxb:C (2.095) BS01 peptide ? GO:0006955 ... P01903 37142807

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).