SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    760201 7zm7:B (2.77) BS01 SF4 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760202 7zm7:B (2.77) BS02 FMN 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760203 7zm7:C (2.77) BS01 SF4 ? GO:0005739 ... G0SCG0 36427319
    760204 7zm7:E (2.77) BS01 NDP ? N/A G0SB35 36427319
    760205 7zm7:H (2.77) BS01 FES ? GO:0016491 ... G0SDM6 36427319
    760206 7zm7:I (2.77) BS01 SF4 ? GO:0016020 ... G0SBG8 36427319
    760207 7zm7:I (2.77) BS02 SF4 ? GO:0016020 ... G0SBG8 36427319
    760208 7zm7:K (2.77) BS01 SF4 ? GO:0005739 ... G0S9I6 36427319
    760209 7zm7:M (2.77) BS01 ZN ? N/A G0S6J1 36427319
    760210 7zm7:O (2.77) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760211 7zm7:P (2.77) BS01 ZMP ? GO:0005739 ... G0S4Q3 36427319
    760212 7zm7:R (2.77) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760213 7zm8:R (2.76) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760214 7zmb:2 (2.75) BS01 LMN 7.1.1.2 GO:0005739 ... G1DJ98 36427319
    760215 7zmb:4 (2.75) BS01 LMN 7.1.1.2 GO:0003954 ... G1DJA7 36427319
    760216 7zmb:A (2.75) BS01 FES ? GO:0008137 ... G0RYA1 36427319
    760217 7zmb:A (2.75) BS02 SF4 ? GO:0008137 ... G0RYA1 36427319
    760218 7zmb:A (2.75) BS03 SF4 ? GO:0008137 ... G0RYA1 36427319
    760219 7zmb:B (2.75) BS01 SF4 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760220 7zmb:B (2.75) BS02 FMN 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760221 7zmb:C (2.75) BS01 SF4 ? GO:0005739 ... G0SCG0 36427319
    760222 7zmb:E (2.75) BS01 NDP ? N/A G0SB35 36427319
    760223 7zmb:H (2.75) BS01 FES ? GO:0016491 ... G0SDM6 36427319
    760224 7zmb:I (2.75) BS01 SF4 ? GO:0016020 ... G0SBG8 36427319
    760225 7zmb:I (2.75) BS02 SF4 ? GO:0016020 ... G0SBG8 36427319
    760226 7zmb:K (2.75) BS01 SF4 ? GO:0005739 ... G0S9I6 36427319
    760227 7zmb:M (2.75) BS01 ZN ? N/A G0S6J1 36427319
    760228 7zmb:O (2.75) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760229 7zmb:P (2.75) BS01 ZMP ? GO:0005739 ... G0S4Q3 36427319
    760230 7zmb:Q (2.75) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760231 7zmb:R (2.75) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760232 7zmb:b (2.75) BS01 LMN ? GO:0016020 ... G0S812 36427319
    760233 7zmb:c (2.75) BS01 ZMP ? GO:0005739 ... G0S681 36427319
    760234 7zmb:j (2.75) BS01 LMN ? GO:0016020 ... G0S5C8 36427319
    760235 7zme:2 (2.83) BS01 LMN 7.1.1.2 GO:0005739 ... G1DJ98 36427319
    760236 7zme:4 (2.83) BS01 LMN 7.1.1.2 GO:0003954 ... G1DJA7 36427319
    760237 7zme:5 (2.83) BS01 LMN 7.1.1.2 GO:0008137 ... G1DJA3 36427319
    760238 7zme:J (2.83) BS01 LMN ? GO:0005739 ... G0S2B3 36427319
    760239 7zme:Q (2.83) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760240 7zme:R (2.83) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760241 7zme:j (2.83) BS01 LMN ? GO:0016020 ... G0S5C8 36427319
    760242 7zmf:A (2.21) BS01 MG ? N/A C0ZGQ6 36129979
    760243 7zmf:B (2.21) BS01 MG ? N/A C0ZGQ6 36129979
    760244 7zmg:2 (2.44) BS01 LMN 7.1.1.2 GO:0005739 ... G1DJ98 36427319
    760245 7zmg:4 (2.44) BS01 LMN 7.1.1.2 GO:0003954 ... G1DJA7 36427319
    760246 7zmg:4 (2.44) BS02 LMN 7.1.1.2 GO:0003954 ... G1DJA7 36427319
    760247 7zmg:5 (2.44) BS01 LMN 7.1.1.2 GO:0008137 ... G1DJA3 36427319
    760248 7zmg:A (2.44) BS01 FES ? GO:0008137 ... G0RYA1 36427319
    760249 7zmg:A (2.44) BS02 SF4 ? GO:0008137 ... G0RYA1 36427319
    760250 7zmg:A (2.44) BS03 SF4 ? GO:0008137 ... G0RYA1 36427319
    760251 7zmg:B (2.44) BS01 SF4 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760252 7zmg:B (2.44) BS02 FMN 7.1.1.2 GO:0005739 ... G0SA46 36427319
    760253 7zmg:C (2.44) BS01 SF4 ? GO:0005739 ... G0SCG0 36427319
    760254 7zmg:E (2.44) BS01 NDP ? N/A G0SB35 36427319
    760255 7zmg:H (2.44) BS01 FES ? GO:0016491 ... G0SDM6 36427319
    760256 7zmg:I (2.44) BS01 SF4 ? GO:0016020 ... G0SBG8 36427319
    760257 7zmg:I (2.44) BS02 SF4 ? GO:0016020 ... G0SBG8 36427319
    760258 7zmg:J (2.44) BS01 LMN ? GO:0005739 ... G0S2B3 36427319
    760259 7zmg:K (2.44) BS01 SF4 ? GO:0005739 ... G0S9I6 36427319
    760260 7zmg:M (2.44) BS01 ZN ? N/A G0S6J1 36427319
    760261 7zmg:O (2.44) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760262 7zmg:P (2.44) BS01 ZMP ? GO:0005739 ... G0S4Q3 36427319
    760263 7zmg:Q (2.44) BS01 ZMP ? GO:0000035 ... G0SBG9 36427319
    760264 7zmg:R (2.44) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760265 7zmg:b (2.44) BS01 LMN ? GO:0016020 ... G0S812 36427319
    760266 7zmg:c (2.44) BS01 ZMP ? GO:0005739 ... G0S681 36427319
    760267 7zmg:j (2.44) BS01 LMN ? GO:0016020 ... G0S5C8 36427319
    760268 7zmh:2 (2.47) BS01 LMN 7.1.1.2 GO:0005739 ... G1DJ98 36427319
    760269 7zmh:4 (2.47) BS01 LMN 7.1.1.2 GO:0003954 ... G1DJA7 36427319
    760270 7zmh:J (2.47) BS01 LMN ? GO:0005739 ... G0S2B3 36427319
    760271 7zmh:R (2.47) BS01 ZMP ? GO:0005739 ... G0SAY0 36427319
    760272 7zmh:b (2.47) BS01 LMN ? GO:0016020 ... G0S812 36427319
    760273 7zmh:j (2.47) BS01 LMN ? GO:0016020 ... G0S5C8 36427319
    760274 7zmi:A (2.15) BS01 IXJ 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 36480352
    760275 7zmi:B (2.15) BS01 IXJ 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 36480352
    760276 7zmj:A (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760277 7zmj:B (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760278 7zmj:C (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760279 7zmj:D (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760280 7zmj:E (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760281 7zmj:F (2.0) BS01 HEM ? GO:0004601 ... A0A7U9HFU5 36366763
    760282 7zmk:A (3.4) BS01 CA ? N/A P55083 39863929
    760283 7zmk:D (3.4) BS01 CA ? N/A P55083 39863929
    760284 7zmk:I (3.4) BS01 CA ? N/A P55083 39863929
    760285 7zmk:L (3.4) BS01 CA ? N/A P55083 39863929
    760286 7zmk:O (3.4) BS01 CA ? N/A P55083 39863929
    760287 7zmk:R (3.4) BS01 CA ? N/A P55083 39863929
    760288 7zmk:U (3.4) BS01 CA ? N/A P55083 39863929
    760289 7zmk:X (3.4) BS01 CA ? N/A P55083 39863929
    760290 7zml:A (2.79) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760291 7zml:B (2.79) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760292 7zml:C (2.79) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760293 7zml:D (2.79) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760294 7zmm:A (2.5) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760295 7zmm:B (2.5) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760296 7zmm:C (2.5) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760297 7zmm:D (2.5) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760298 7zmn:A (3.2) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760299 7zmn:B (3.2) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760300 7zmo:A (3.75) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760301 7zmo:B (3.75) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760302 7zmp:A (3.626) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760303 7zmp:B (3.626) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760304 7zmq:A (2.7) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760305 7zmq:B (2.7) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760306 7zmr:A (3.3) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760307 7zmr:B (3.3) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760308 7zms:A (2.7) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760309 7zmt:A (2.3) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760310 7zmt:B (2.3) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760311 7zmu:A (1.6) BS01 peptide ? GO:0000122 ... P31947 36425501
    760312 7zmv:A (2.002) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760313 7zmv:B (2.002) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760314 7zmv:C (2.002) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760315 7zmv:D (2.002) BS01 ZN 5.6.2.4 GO:0003676 ... O94762 N/A
    760316 7zmw:A (1.8) BS01 peptide ? GO:0000122 ... P31947 36425501
    760317 7zmw:A (1.8) BS02 MG ? GO:0000122 ... P31947 36425501
    760318 7zmx:A (1.2) BS01 ZN ? N/A Q9NXR8 37148949
    760319 7zmx:A (1.2) BS02 ZN ? N/A Q9NXR8 37148949
    760320 7zmx:B (1.2) BS01 ZN ? N/A Q9NXR8 37148949
    760321 7zmx:B (1.2) BS02 ZN ? N/A Q9NXR8 37148949
    760322 7zn1:A (2.33) BS01 KFL ? GO:0009374 ... P02701 N/A
    760323 7zn1:B (2.33) BS01 KFL ? GO:0009374 ... P02701 N/A
    760324 7zn1:C (2.33) BS01 KFL ? GO:0009374 ... P02701 N/A
    760325 7zn1:D (2.33) BS01 KFL ? GO:0009374 ... P02701 N/A
    760326 7zn5:A (3.7) BS01 dna ? GO:0003700 ... Q5WKW3 37378428
    760327 7zn5:B (3.7) BS01 dna ? GO:0003700 ... Q5WKW3 37378428
    760328 7zn5:B (3.7) BS02 dna ? GO:0003700 ... Q5WKW3 37378428
    760329 7zn6:A (1.9) BS01 OXY 1.-.-.- GO:0005507 ... G2QFD0 37326583
    760330 7zn6:A (1.9) BS02 CU 1.-.-.- GO:0005507 ... G2QFD0 37326583
    760331 7zn6:A (1.9) BS03 CU 1.-.-.- GO:0005507 ... G2QFD0 37326583
    760332 7zn6:A (1.9) BS04 CU 1.-.-.- GO:0005507 ... G2QFD0 37326583
    760333 7zn6:A (1.9) BS05 CU 1.-.-.- GO:0005507 ... G2QFD0 37326583
    760334 7zn7:B (3.78) BS01 ZN ? N/A K7Y9Z1 36762436
    760335 7znf:A (-1.00) BS01 ZN ? GO:0003677 ... P08048 1849423
    760336 7znj:A (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760337 7znj:A (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760338 7znj:F (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760339 7znj:F (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760340 7znj:K (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760341 7znj:K (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760342 7znj:a (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760343 7znj:a (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760344 7znj:f (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760345 7znj:f (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760346 7znj:k (2.4) BS01 rna 3.6.4.13 GO:0000184 ... P38919 37020021
    760347 7znj:k (2.4) BS02 ANP 3.6.4.13 GO:0000184 ... P38919 37020021
    760348 7znk:P (3.9) BS01 rna 3.6.4.13 GO:0000245 ... Q13838 37020021
    760349 7znk:p (3.9) BS01 rna 3.6.4.13 GO:0000245 ... Q13838 37020021
    760350 7znm:A (2.01) BS01 HEM N/A GO:0004601 ... N/A 36374006
    760351 7znm:A (2.01) BS02 MG N/A GO:0004601 ... N/A 36374006
    760352 7znm:B (2.01) BS01 HEM N/A GO:0004601 ... N/A 36374006
    760353 7znm:B (2.01) BS02 MG N/A GO:0004601 ... N/A 36374006
    760354 7znn:B (4.8) BS01 ZN ? N/A K7Y9Z1 36762436
    760355 7zno:A (1.7) BS01 JQI 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0004252 ... Q32ZE1 36325810
    760356 7zno:B (1.7) BS01 JQI 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 36325810
    760357 7znp:A (2.15) BS01 MG N/A GO:0004645 ... N/A N/A
    760358 7znq:D (3.04) BS01 MG ? N/A P19843 35896743
    760359 7znq:D (3.04) BS02 CU ? N/A P19843 35896743
    760360 7znq:L (3.04) BS01 ZN ? N/A Q52529 35896743
    760361 7znr:A (2.65) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760362 7znr:A (2.65) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760363 7znr:A (2.65) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760364 7znr:A (2.65) BS04 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760365 7znr:A (2.65) BS05 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760366 7znr:A (2.65) BS06 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760367 7znr:A (2.65) BS07 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760368 7znr:A (2.65) BS08 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760369 7znr:B (2.65) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760370 7znr:B (2.65) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760371 7znr:B (2.65) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760372 7znr:B (2.65) BS04 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760373 7znr:B (2.65) BS05 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760374 7znr:B (2.65) BS06 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760375 7zns:A (2.3) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760376 7zns:A (2.3) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760377 7zns:A (2.3) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760378 7zns:A (2.3) BS04 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760379 7zns:A (2.3) BS05 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760380 7zns:A (2.3) BS06 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760381 7zns:B (2.3) BS01 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760382 7zns:B (2.3) BS02 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760383 7zns:B (2.3) BS03 FRU 3.2.1.26 GO:0004553 ... Q8A6W6 37286596
    760384 7znt:C (3.0) BS01 IZR ? N/A P40337 36329119
    760385 7znt:F (3.0) BS01 IZR ? N/A P40337 36329119
    760386 7znt:G (3.0) BS01 IZR ? N/A O60885 36329119
    760387 7znt:H (3.0) BS01 IZR ? N/A O60885 36329119
    760388 7znu:A (4.0) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760389 7znu:A (4.0) BS02 VO4 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760390 7znu:A (4.0) BS03 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760391 7znu:B (4.0) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760392 7znu:B (4.0) BS02 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760393 7znu:B (4.0) BS03 VO4 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    760394 7znv:A (1.21) BS01 HEM N/A GO:0004601 ... N/A 36374006
    760395 7znv:A (1.21) BS02 MG N/A GO:0004601 ... N/A 36374006
    760396 7znw:A (2.09) BS01 HEM N/A GO:0004601 ... N/A 36374006
    760397 7znw:A (2.09) BS02 MG N/A GO:0004601 ... N/A 36374006
    760398 7znw:C (2.09) BS01 HEM N/A GO:0004601 ... N/A 36374006
    760399 7znw:C (2.09) BS02 MG N/A GO:0004601 ... N/A 36374006
    760400 7zo1:B (2.4) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 36306733

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).