SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    760601 7z0n:AAA (2.4) BS02 MAN 3.1.4.39 GO:0001953 ... Q64610 35440138
    760602 7z0n:AAA (2.4) BS03 ZN 3.1.4.39 GO:0001953 ... Q64610 35440138
    760603 7z0n:AAA (2.4) BS04 ZN 3.1.4.39 GO:0001953 ... Q64610 35440138
    760604 7z0n:AAA (2.4) BS05 CA 3.1.4.39 GO:0001953 ... Q64610 35440138
    760605 7z0n:AAA (2.4) BS06 I8K 3.1.4.39 GO:0001953 ... Q64610 35440138
    760606 7z0o:C (2.8) BS01 dna ? GO:0000776 ... P61830 35442737
    760607 7z0o:D (2.8) BS01 dna ? GO:0000182 ... Q02983 35442737
    760608 7z0o:E (2.8) BS01 dna ? GO:0000500 ... P53437 35442737
    760609 7z0o:E (2.8) BS02 dna ? GO:0000500 ... P53437 35442737
    760610 7z0p:AAA (2.52) BS01 I8H 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0DTC1 35807537
    760611 7z0q:C (2.1) BS01 peptide ? GO:0006955 ... P01903 37142807
    760612 7z0q:D (2.1) BS01 peptide ? GO:0006955 ... D7RIG5 37142807
    760613 7z0r:A (1.66) BS01 ZN ? GO:0003700 ... Q9C5T4 35660042
    760614 7z0r:B (1.66) BS01 ZN ? GO:0003700 ... Q9C5T4 35660042
    760615 7z0s:B (2.6) BS01 SF4 ? GO:0006007 ... P0AAK1 36104349
    760616 7z0s:B (2.6) BS02 SF4 ? GO:0006007 ... P0AAK1 36104349
    760617 7z0s:B (2.6) BS03 SF4 ? GO:0006007 ... P0AAK1 36104349
    760618 7z0s:B (2.6) BS04 SF4 ? GO:0006007 ... P0AAK1 36104349
    760619 7z0s:D (2.6) BS01 DR9 ? GO:0005886 ... P16430 36104349
    760620 7z0s:D (2.6) BS02 LMN ? GO:0005886 ... P16430 36104349
    760621 7z0s:E (2.6) BS01 FCO ? GO:0008137 ... P16431 36104349
    760622 7z0s:E (2.6) BS02 DR9 ? GO:0008137 ... P16431 36104349
    760623 7z0s:F (2.6) BS01 SF4 ? GO:0003954 ... P16432 36104349
    760624 7z0s:F (2.6) BS02 SF4 ? GO:0003954 ... P16432 36104349
    760625 7z0s:F (2.6) BS03 FE ? GO:0003954 ... P16432 36104349
    760626 7z0s:G (2.6) BS01 SF4 ? GO:0005515 ... P16433 36104349
    760627 7z0t:A (3.4) BS01 SF4 1.17.98.4 GO:0003954 ... P07658 36104349
    760628 7z0t:A (3.4) BS02 MGD 1.17.98.4 GO:0003954 ... P07658 36104349
    760629 7z0t:A (3.4) BS03 MGD 1.17.98.4 GO:0003954 ... P07658 36104349
    760630 7z0t:B (3.4) BS01 SF4 ? GO:0006007 ... P0AAK1 36104349
    760631 7z0t:B (3.4) BS02 SF4 ? GO:0006007 ... P0AAK1 36104349
    760632 7z0t:B (3.4) BS03 SF4 ? GO:0006007 ... P0AAK1 36104349
    760633 7z0t:B (3.4) BS04 SF4 ? GO:0006007 ... P0AAK1 36104349
    760634 7z0t:E (3.4) BS01 FCO ? GO:0008137 ... P16431 36104349
    760635 7z0t:F (3.4) BS01 SF4 ? GO:0003954 ... P16432 36104349
    760636 7z0t:F (3.4) BS02 SF4 ? GO:0003954 ... P16432 36104349
    760637 7z0t:F (3.4) BS03 FE ? GO:0003954 ... P16432 36104349
    760638 7z0t:G (3.4) BS01 SF4 ? GO:0005515 ... P16433 36104349
    760639 7z0u:A (2.85) BS01 dna ? GO:0003700 ... Q9C5T4 35660042
    760640 7z0u:A (2.85) BS02 dna ? GO:0003700 ... Q9C5T4 35660042
    760641 7z0u:A (2.85) BS03 ZN ? GO:0003700 ... Q9C5T4 35660042
    760642 7z0v:A (1.45) BS01 CO 4.2.1.84 GO:0003824 ... Q84FS5 36106339
    760643 7z0w:A (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760644 7z0w:A (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760645 7z0w:B (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760646 7z0w:B (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760647 7z0w:B (2.06) BS03 ATR 1.-.-.- GO:0003955 ... P17117 35648111
    760648 7z0w:C (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760649 7z0w:C (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760650 7z0w:D (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760651 7z0w:D (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760652 7z0w:D (2.06) BS03 ATR 1.-.-.- GO:0003955 ... P17117 35648111
    760653 7z0w:E (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760654 7z0w:E (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760655 7z0w:F (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760656 7z0w:F (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760657 7z0w:G (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760658 7z0w:G (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760659 7z0w:H (2.06) BS01 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760660 7z0w:H (2.06) BS02 FMN 1.-.-.- GO:0003955 ... P17117 35648111
    760661 7z10:a (3.87) BS01 CU 7.1.1.9 GO:0004129 ... P00401 35839926
    760662 7z10:a (3.87) BS02 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    760663 7z10:a (3.87) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    760664 7z10:b (3.87) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 35839926
    760665 7z10:b (3.87) BS02 CUA 7.1.1.9 GO:0004129 ... P00410 35839926
    760666 7z10:d (3.87) BS01 ZN ? GO:0005740 ... P04037 35839926
    760667 7z11:A (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    760668 7z11:A (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760669 7z11:A (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760670 7z11:B (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    760671 7z11:B (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760672 7z11:B (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760673 7z11:B (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760674 7z11:C (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    760675 7z11:C (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760676 7z11:C (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760677 7z11:C (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760678 7z11:C (3.2) BS05 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760679 7z11:D (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    760680 7z11:D (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760681 7z11:D (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760682 7z11:D (3.2) BS04 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760683 7z11:E (3.2) BS01 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760684 7z11:F (3.2) BS01 peptide 3.6.4.10 GO:0005515 ... P32794 36097293
    760685 7z11:F (3.2) BS02 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760686 7z11:F (3.2) BS03 AGS 3.6.4.10 GO:0005515 ... P32794 36097293
    760687 7z13:2 (3.4) BS01 dna 3.6.4.12 GO:0003677 ... N/A 35705812
    760688 7z13:2 (3.4) BS02 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760689 7z13:2 (3.4) BS03 ZN 3.6.4.12 GO:0003677 ... N/A 35705812
    760690 7z13:2 (3.4) BS04 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760691 7z13:3 (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P24279 35705812
    760692 7z13:3 (3.4) BS02 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    760693 7z13:3 (3.4) BS03 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    760694 7z13:4 (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P30665 35705812
    760695 7z13:4 (3.4) BS02 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    760696 7z13:4 (3.4) BS03 ZN 3.6.4.12 GO:0000727 ... P30665 35705812
    760697 7z13:4 (3.4) BS04 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    760698 7z13:5 (3.4) BS01 dna 3.6.4.12 GO:0003677 ... N/A 35705812
    760699 7z13:5 (3.4) BS02 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760700 7z13:5 (3.4) BS03 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760701 7z13:5 (3.4) BS04 ZN 3.6.4.12 GO:0003677 ... N/A 35705812
    760702 7z13:6 (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P53091 35705812
    760703 7z13:6 (3.4) BS02 ATP 3.6.4.12 GO:0000727 ... P53091 35705812
    760704 7z13:6 (3.4) BS03 ADP 3.6.4.12 GO:0000727 ... P53091 35705812
    760705 7z13:6 (3.4) BS04 ZN 3.6.4.12 GO:0000727 ... P53091 35705812
    760706 7z13:7 (3.4) BS01 ATP N/A GO:0003677 ... N/A 35705812
    760707 7z13:7 (3.4) BS02 ZN N/A GO:0003677 ... N/A 35705812
    760708 7z13:N (3.4) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 35705812
    760709 7z13:N (3.4) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 35705812
    760710 7z13:Q (3.4) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 35705812
    760711 7z13:Q (3.4) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 35705812
    760712 7z13:a (3.4) BS01 dna 3.6.4.12 GO:0003677 ... N/A 35705812
    760713 7z13:a (3.4) BS02 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760714 7z13:a (3.4) BS03 ZN 3.6.4.12 GO:0003677 ... N/A 35705812
    760715 7z13:a (3.4) BS04 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760716 7z13:b (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P24279 35705812
    760717 7z13:b (3.4) BS02 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    760718 7z13:b (3.4) BS03 ATP 3.6.4.12 GO:0000727 ... P24279 35705812
    760719 7z13:c (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P30665 35705812
    760720 7z13:c (3.4) BS02 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    760721 7z13:c (3.4) BS03 ZN 3.6.4.12 GO:0000727 ... P30665 35705812
    760722 7z13:c (3.4) BS04 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    760723 7z13:d (3.4) BS01 dna 3.6.4.12 GO:0003677 ... N/A 35705812
    760724 7z13:d (3.4) BS02 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760725 7z13:d (3.4) BS03 ATP 3.6.4.12 GO:0003677 ... N/A 35705812
    760726 7z13:d (3.4) BS04 ZN 3.6.4.12 GO:0003677 ... N/A 35705812
    760727 7z13:e (3.4) BS01 dna 3.6.4.12 GO:0000727 ... P53091 35705812
    760728 7z13:e (3.4) BS02 ATP 3.6.4.12 GO:0000727 ... P53091 35705812
    760729 7z13:e (3.4) BS03 ADP 3.6.4.12 GO:0000727 ... P53091 35705812
    760730 7z13:e (3.4) BS04 ZN 3.6.4.12 GO:0000727 ... P53091 35705812
    760731 7z13:f (3.4) BS01 ATP N/A GO:0003677 ... N/A 35705812
    760732 7z13:f (3.4) BS02 ZN N/A GO:0003677 ... N/A 35705812
    760733 7z14:A (3.15) BS01 MAN ? GO:0004888 ... P02710 35927270
    760734 7z14:A (3.15) BS02 MAN ? GO:0004888 ... P02710 35927270
    760735 7z14:D (3.15) BS01 MAN ? GO:0004888 ... P02710 35927270
    760736 7z15:C (1.93) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760737 7z15:C (1.93) BS02 I9X 2.7.8.37 GO:0005515 ... P16687 36813778
    760738 7z15:D (1.93) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760739 7z15:D (1.93) BS02 I9X 4.7.1.1 GO:0005515 ... P16688 36813778
    760740 7z15:G (1.93) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760741 7z15:G (1.93) BS02 I9X 2.7.8.37 GO:0005515 ... P16687 36813778
    760742 7z15:H (1.93) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760743 7z15:H (1.93) BS02 I9X 4.7.1.1 GO:0005515 ... P16688 36813778
    760744 7z15:I (1.93) BS01 ADP ? GO:0000166 ... P16678 36813778
    760745 7z15:I (1.93) BS02 MG ? GO:0000166 ... P16678 36813778
    760746 7z15:I (1.93) BS03 ADP ? GO:0000166 ... P16678 36813778
    760747 7z15:J (1.93) BS01 ADP ? GO:0000166 ... P16678 36813778
    760748 7z15:J (1.93) BS02 ADP ? GO:0000166 ... P16678 36813778
    760749 7z15:J (1.93) BS03 MG ? GO:0000166 ... P16678 36813778
    760750 7z15:K (1.93) BS01 ATP 2.7.8.37 GO:0005524 ... P16679 36813778
    760751 7z15:L (1.93) BS01 ATP 2.7.8.37 GO:0005524 ... P16679 36813778
    760752 7z16:C (2.09) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760753 7z16:D (2.09) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760754 7z16:G (2.09) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760755 7z16:H (2.09) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760756 7z16:I (2.09) BS01 ANP ? GO:0000166 ... P16678 36813778
    760757 7z16:I (2.09) BS02 ANP ? GO:0000166 ... P16678 36813778
    760758 7z16:J (2.09) BS01 ANP ? GO:0000166 ... P16678 36813778
    760759 7z16:J (2.09) BS02 ANP ? GO:0000166 ... P16678 36813778
    760760 7z17:C (2.57) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760761 7z17:C (2.57) BS02 I9X 2.7.8.37 GO:0005515 ... P16687 36813778
    760762 7z17:D (2.57) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760763 7z17:D (2.57) BS02 I9X 4.7.1.1 GO:0005515 ... P16688 36813778
    760764 7z17:G (2.57) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760765 7z17:H (2.57) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760766 7z18:C (1.98) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760767 7z18:C (1.98) BS02 I9X 2.7.8.37 GO:0005515 ... P16687 36813778
    760768 7z18:D (1.98) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760769 7z18:D (1.98) BS02 I9X 4.7.1.1 GO:0005515 ... P16688 36813778
    760770 7z18:G (1.98) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760771 7z18:G (1.98) BS02 I9X 2.7.8.37 GO:0005515 ... P16687 36813778
    760772 7z18:H (1.98) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760773 7z18:H (1.98) BS02 I9X 4.7.1.1 GO:0005515 ... P16688 36813778
    760774 7z18:I (1.98) BS01 ATP ? GO:0000166 ... P16678 36813778
    760775 7z18:I (1.98) BS02 MG ? GO:0000166 ... P16678 36813778
    760776 7z18:I (1.98) BS03 ATP ? GO:0000166 ... P16678 36813778
    760777 7z18:J (1.98) BS01 ATP ? GO:0000166 ... P16678 36813778
    760778 7z18:J (1.98) BS02 ATP ? GO:0000166 ... P16678 36813778
    760779 7z18:J (1.98) BS03 MG ? GO:0000166 ... P16678 36813778
    760780 7z19:C (2.57) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760781 7z19:D (2.57) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760782 7z19:G (2.57) BS01 ZN 2.7.8.37 GO:0005515 ... P16687 36813778
    760783 7z19:H (2.57) BS01 ZN 4.7.1.1 GO:0005515 ... P16688 36813778
    760784 7z1f:A (3.0) BS01 3NG 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 N/A
    760785 7z1f:B (3.0) BS01 3NG 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 N/A
    760786 7z1g:A (2.85) BS01 3NG 2.7.11.1
    2.7.11.26
    GO:0004672 ... P49841 N/A
    760787 7z1i:A (3.09) BS01 CA 3.2.1.147
    3.2.1.21
    GO:0004553 ... P37702 N/A
    760788 7z1i:B (3.09) BS01 CA 3.2.1.147
    3.2.1.21
    GO:0004553 ... P37702 N/A
    760789 7z1i:D (3.09) BS01 CA 3.2.1.147
    3.2.1.21
    GO:0004553 ... P37702 N/A
    760790 7z1j:A (1.85) BS01 PO4 3.1.3.-
    3.6.1.-
    GO:0003924 ... P07102 35683026
    760791 7z1j:A (1.85) BS02 PO4 3.1.3.-
    3.6.1.-
    GO:0003924 ... P07102 35683026
    760792 7z1k:A (1.55) BS01 peptide ? N/A Q96T58 36631525
    760793 7z1l:A (2.8) BS01 rna 2.7.7.6 GO:0000428 ... P04051 36070694
    760794 7z1l:A (2.8) BS02 dna 2.7.7.6 GO:0000428 ... P04051 36070694
    760795 7z1l:A (2.8) BS03 dna 2.7.7.6 GO:0000428 ... P04051 36070694
    760796 7z1l:A (2.8) BS04 ZN 2.7.7.6 GO:0000428 ... P04051 36070694
    760797 7z1l:A (2.8) BS05 ZN 2.7.7.6 GO:0000428 ... P04051 36070694
    760798 7z1l:A (2.8) BS06 MG 2.7.7.6 GO:0000428 ... P04051 36070694
    760799 7z1l:B (2.8) BS01 rna 2.7.7.6 GO:0003677 ... P22276 36070694
    760800 7z1l:B (2.8) BS02 dna 2.7.7.6 GO:0003677 ... P22276 36070694

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).