SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    761601 7z5k:B (2.28) BS01 dna ? GO:0006355 ... P13349 39753777
    761602 7z5k:B (2.28) BS02 dna ? GO:0006355 ... P13349 39753777
    761603 7z5m:A (1.7) BS01 5ZK ? GO:0003723 ... Q9Y5A9 36110386
    761604 7z5m:B (1.7) BS01 5ZK ? GO:0003723 ... Q9Y5A9 36110386
    761605 7z5n:A (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761606 7z5n:B (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761607 7z5n:C (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761608 7z5n:D (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761609 7z5n:E (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761610 7z5n:F (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761611 7z5n:G (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761612 7z5n:H (2.77) BS01 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761613 7z5n:H (2.77) BS02 3NG 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 N/A
    761614 7z5o:AAA (1.527) BS01 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    761615 7z5o:AAA (1.527) BS02 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    761616 7z5o:AAA (1.527) BS03 SF4 1.2.1.2 GO:0005515 ... Q72EJ1 35766974
    761617 7z5o:BBB (1.527) BS01 SF4 ? GO:0030313 ... Q72EJ0 35766974
    761618 7z5o:BBB (1.527) BS02 SF4 ? GO:0030313 ... Q72EJ0 35766974
    761619 7z5o:BBB (1.527) BS03 SF4 ? GO:0030313 ... Q72EJ0 35766974
    761620 7z5p:A (2.991) BS01 CU ? GO:0005507 ... A8FAG9 35624560
    761621 7z5p:A (2.991) BS02 CU ? GO:0005507 ... A8FAG9 35624560
    761622 7z5p:A (2.991) BS03 CU ? GO:0005507 ... A8FAG9 35624560
    761623 7z5p:A (2.991) BS04 CU ? GO:0005507 ... A8FAG9 35624560
    761624 7z5p:B (2.991) BS01 CU ? GO:0005507 ... A8FAG9 35624560
    761625 7z5p:B (2.991) BS02 CU ? GO:0005507 ... A8FAG9 35624560
    761626 7z5p:B (2.991) BS03 CU ? GO:0005507 ... A8FAG9 35624560
    761627 7z5p:B (2.991) BS04 CU ? GO:0005507 ... A8FAG9 35624560
    761628 7z5q:B (1.8) BS01 peptide ? GO:0005179 ... P01308 N/A
    761629 7z5r:A (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 39966348
    761630 7z5r:B (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 39966348
    761631 7z5r:C (2.5) BS01 IGQ 3.2.2.-
    4.2.99.18
    GO:0000702 ... O08760 39966348
    761632 7z5s:BBB (2.1) BS01 GAL ? GO:0005576 ... K4GGE0 35622602
    761633 7z5s:BBB (2.1) BS02 SIA ? GO:0005576 ... K4GGE0 35622602
    761634 7z5u:A (1.8) BS01 ZN 3.4.24.3 GO:0004222 ... Q9X721 36154055
    761635 7z5u:A (1.8) BS02 IFW 3.4.24.3 GO:0004222 ... Q9X721 36154055
    761636 7z5u:A (1.8) BS03 CA 3.4.24.3 GO:0004222 ... Q9X721 36154055
    761637 7z5w:A (2.254) BS01 IDW 2.7.10.1 GO:0004672 ... P08922 35920716
    761638 7z5w:B (2.254) BS01 IDW 2.7.10.1 GO:0004672 ... P08922 35920716
    761639 7z5x:A (2.035) BS01 AWJ 2.7.10.1 GO:0004672 ... P08922 35920716
    761640 7z5x:B (2.035) BS01 AWJ 2.7.10.1 GO:0004672 ... P08922 35920716
    761641 7z5y:A (1.71) BS01 dna 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761642 7z5y:A (1.71) BS02 peptide 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761643 7z5y:A (1.71) BS03 UDP 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761644 7z5z:A (1.49) BS01 dna 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761645 7z5z:A (1.49) BS02 peptide 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761646 7z5z:A (1.49) BS03 UDP 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761647 7z60:B (1.4) BS01 J6O ? GO:0001523 ... P02766 N/A
    761648 7z61:A (2.738) BS01 IGJ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 35978693
    761649 7z62:AAA (1.53) BS01 CA ? GO:0005737 ... Q05097 36549118
    761650 7z62:AAA (1.53) BS02 IEC ? GO:0005737 ... Q05097 36549118
    761651 7z62:BBB (1.53) BS01 IEC ? GO:0005737 ... Q05097 36549118
    761652 7z62:BBB (1.53) BS02 CA ? GO:0005737 ... Q05097 36549118
    761653 7z63:AAA (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    761654 7z63:AAA (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    761655 7z63:BBB (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    761656 7z63:BBB (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    761657 7z63:CCC (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    761658 7z63:CCC (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    761659 7z63:DDD (1.75) BS01 CA ? GO:0005737 ... Q05097 36549118
    761660 7z63:DDD (1.75) BS02 IE3 ? GO:0005737 ... Q05097 36549118
    761661 7z67:A (2.65) BS01 ACP 3.6.1.1 GO:0005524 ... Q9C9B9 N/A
    761662 7z67:A (2.65) BS02 MG 3.6.1.1 GO:0005524 ... Q9C9B9 N/A
    761663 7z68:A (1.5) BS01 CA 3.4.24.26 GO:0004222 ... P14756 N/A
    761664 7z68:A (1.5) BS02 ZN 3.4.24.26 GO:0004222 ... P14756 N/A
    761665 7z68:A (1.5) BS03 IEV 3.4.24.26 GO:0004222 ... P14756 N/A
    761666 7z6a:A (1.66) BS01 peptide 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761667 7z6a:A (1.66) BS02 dna 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761668 7z6a:A (1.66) BS03 UDP 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761669 7z6c:A (1.85) BS01 FMN 1.3.5.2 GO:0004152 ... Q02127 36162075
    761670 7z6c:A (1.85) BS02 IEQ 1.3.5.2 GO:0004152 ... Q02127 36162075
    761671 7z6d:A (1.45) BS01 F3I 4.6.1.18 GO:0003676 ... P61823 N/A
    761672 7z6e:A (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    761673 7z6e:A (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    761674 7z6e:B (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    761675 7z6e:B (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    761676 7z6e:C (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    761677 7z6e:C (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    761678 7z6e:D (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    761679 7z6e:D (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    761680 7z6e:E (2.14) BS01 ZN 2.7.11.1 N/A O01583 36854301
    761681 7z6e:E (2.14) BS02 ZN 2.7.11.1 N/A O01583 36854301
    761682 7z6f:E (1.65) BS01 peptide ? GO:0006857 ... P33913 39739799
    761683 7z6g:A (1.71) BS01 F3I 4.6.1.18 GO:0003676 ... P61823 N/A
    761684 7z6h:D (3.59) BS01 AGS ? GO:0000076 ... P35249 35819203
    761685 7z6h:E (3.59) BS01 AGS ? GO:0000076 ... P40938 35819203
    761686 7z6h:F (3.59) BS01 dna ? GO:0000076 ... P35250 35819203
    761687 7z6h:F (3.59) BS02 AGS ? GO:0000076 ... P35250 35819203
    761688 7z6h:G (3.59) BS01 dna ? GO:0000076 ... P40937 35819203
    761689 7z6h:G (3.59) BS02 AGS ? GO:0000076 ... P40937 35819203
    761690 7z6h:K (3.59) BS01 dna 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    761691 7z6h:K (3.59) BS02 dna 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    761692 7z6h:K (3.59) BS03 AGS 3.1.11.2 GO:0000076 ... O60671
    O75943
    35819203
    761693 7z6i:AAA (2.25) BS01 IIM 2.7.11.24 GO:0000077 ... P47811 37308482
    761694 7z6i:AAA (2.25) BS02 87B 2.7.11.24 GO:0000077 ... P47811 37308482
    761695 7z6k:A (1.6) BS01 dna 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761696 7z6k:A (1.6) BS02 peptide 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761697 7z6k:A (1.6) BS03 UDP 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761698 7z6k:A (1.6) BS04 MUB 2.3.2.10 GO:0009252 ... Q9EY50 36350642
    761699 7z6l:A (2.24) BS01 IEI 3.6.4.- GO:0006338 ... P51531 36216795
    761700 7z6l:B (2.24) BS01 IEI ? N/A P40337 36216795
    761701 7z6o:A (3.7) BS01 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    761702 7z6o:A (3.7) BS02 dna 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    761703 7z6o:A (3.7) BS03 IHP 3.6.4.-
    4.2.99.-
    GO:0000723 ... P12956 37870477
    761704 7z6o:B (3.7) BS01 dna 3.6.4.- GO:0000723 ... P13010 37870477
    761705 7z6o:B (3.7) BS02 dna 3.6.4.- GO:0000723 ... P13010 37870477
    761706 7z6o:B (3.7) BS03 IHP 3.6.4.- GO:0000723 ... P13010 37870477
    761707 7z6q:A (2.5) BS01 GS0 ? GO:0009579 ... Q8KAY0 36693097
    761708 7z6q:A (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    761709 7z6q:A (2.5) BS03 CLA ? GO:0009579 ... Q8KAY0 36693097
    761710 7z6q:A (2.5) BS04 BCL ? GO:0009579 ... Q8KAY0 36693097
    761711 7z6q:A (2.5) BS05 BCL ? GO:0009579 ... Q8KAY0 36693097
    761712 7z6q:A (2.5) BS06 BCL ? GO:0009579 ... Q8KAY0 36693097
    761713 7z6q:A (2.5) BS07 BCL ? GO:0009579 ... Q8KAY0 36693097
    761714 7z6q:A (2.5) BS08 BCL ? GO:0009579 ... Q8KAY0 36693097
    761715 7z6q:A (2.5) BS09 BCL ? GO:0009579 ... Q8KAY0 36693097
    761716 7z6q:A (2.5) BS10 BCL ? GO:0009579 ... Q8KAY0 36693097
    761717 7z6q:A (2.5) BS11 BCL ? GO:0009579 ... Q8KAY0 36693097
    761718 7z6q:A (2.5) BS12 BCL ? GO:0009579 ... Q8KAY0 36693097
    761719 7z6q:A (2.5) BS13 BCL ? GO:0009579 ... Q8KAY0 36693097
    761720 7z6q:A (2.5) BS14 BCL ? GO:0009579 ... Q8KAY0 36693097
    761721 7z6q:A (2.5) BS15 BCL ? GO:0009579 ... Q8KAY0 36693097
    761722 7z6q:A (2.5) BS16 F39 ? GO:0009579 ... Q8KAY0 36693097
    761723 7z6q:A (2.5) BS17 IKV ? GO:0009579 ... Q8KAY0 36693097
    761724 7z6q:A (2.5) BS18 CA ? GO:0009579 ... Q8KAY0 36693097
    761725 7z6q:A (2.5) BS19 SF4 ? GO:0009579 ... Q8KAY0 36693097
    761726 7z6q:A (2.5) BS20 CLA ? GO:0009579 ... Q8KAY0 36693097
    761727 7z6q:A (2.5) BS21 CLA ? GO:0009579 ... Q8KAY0 36693097
    761728 7z6q:A (2.5) BS22 BCL ? GO:0009579 ... Q8KAY0 36693097
    761729 7z6q:B (2.5) BS01 SF4 ? N/A Q8KAY1 36693097
    761730 7z6q:B (2.5) BS02 SF4 ? N/A Q8KAY1 36693097
    761731 7z6q:C (2.5) BS01 CLA ? GO:0005886 ... O07091 36693097
    761732 7z6q:C (2.5) BS02 BCL ? GO:0005886 ... O07091 36693097
    761733 7z6q:E (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761734 7z6q:E (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761735 7z6q:E (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761736 7z6q:E (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761737 7z6q:E (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761738 7z6q:E (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761739 7z6q:E (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761740 7z6q:E (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761741 7z6q:E (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761742 7z6q:E (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761743 7z6q:F (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761744 7z6q:F (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761745 7z6q:F (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761746 7z6q:F (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761747 7z6q:F (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761748 7z6q:F (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761749 7z6q:F (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761750 7z6q:F (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761751 7z6q:F (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761752 7z6q:F (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761753 7z6q:G (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761754 7z6q:G (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761755 7z6q:G (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761756 7z6q:G (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761757 7z6q:G (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761758 7z6q:G (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761759 7z6q:G (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761760 7z6q:G (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761761 7z6q:G (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761762 7z6q:G (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761763 7z6q:G (2.5) BS11 BCL ? GO:0015979 ... Q46393 36693097
    761764 7z6q:H (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761765 7z6q:H (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761766 7z6q:H (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761767 7z6q:H (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761768 7z6q:H (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761769 7z6q:H (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761770 7z6q:H (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761771 7z6q:H (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761772 7z6q:H (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761773 7z6q:H (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761774 7z6q:I (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761775 7z6q:I (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761776 7z6q:I (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761777 7z6q:I (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761778 7z6q:I (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761779 7z6q:I (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761780 7z6q:I (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761781 7z6q:I (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761782 7z6q:I (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761783 7z6q:I (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761784 7z6q:J (2.5) BS01 BCL ? GO:0015979 ... Q46393 36693097
    761785 7z6q:J (2.5) BS02 BCL ? GO:0015979 ... Q46393 36693097
    761786 7z6q:J (2.5) BS03 BCL ? GO:0015979 ... Q46393 36693097
    761787 7z6q:J (2.5) BS04 BCL ? GO:0015979 ... Q46393 36693097
    761788 7z6q:J (2.5) BS05 BCL ? GO:0015979 ... Q46393 36693097
    761789 7z6q:J (2.5) BS06 BCL ? GO:0015979 ... Q46393 36693097
    761790 7z6q:J (2.5) BS07 BCL ? GO:0015979 ... Q46393 36693097
    761791 7z6q:J (2.5) BS08 BCL ? GO:0015979 ... Q46393 36693097
    761792 7z6q:J (2.5) BS09 BCL ? GO:0015979 ... Q46393 36693097
    761793 7z6q:J (2.5) BS10 BCL ? GO:0015979 ... Q46393 36693097
    761794 7z6q:J (2.5) BS11 BCL ? GO:0015979 ... Q46393 36693097
    761795 7z6q:a (2.5) BS01 CLA ? GO:0009579 ... Q8KAY0 36693097
    761796 7z6q:a (2.5) BS02 CLA ? GO:0009579 ... Q8KAY0 36693097
    761797 7z6q:a (2.5) BS03 SF4 ? GO:0009579 ... Q8KAY0 36693097
    761798 7z6q:a (2.5) BS04 GS0 ? GO:0009579 ... Q8KAY0 36693097
    761799 7z6q:a (2.5) BS05 CLA ? GO:0009579 ... Q8KAY0 36693097
    761800 7z6q:a (2.5) BS06 CLA ? GO:0009579 ... Q8KAY0 36693097

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).