SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    761801 7zqd:B2 (2.97) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761802 7zqd:B2 (2.97) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761803 7zqd:B2 (2.97) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761804 7zqd:B2 (2.97) BS30 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761805 7zqd:B2 (2.97) BS31 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761806 7zqd:B2 (2.97) BS32 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761807 7zqd:B2 (2.97) BS33 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761808 7zqd:B2 (2.97) BS34 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761809 7zqd:B2 (2.97) BS35 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761810 7zqd:B2 (2.97) BS36 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761811 7zqd:B2 (2.97) BS37 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761812 7zqd:B2 (2.97) BS38 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761813 7zqd:B2 (2.97) BS39 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761814 7zqd:B2 (2.97) BS40 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761815 7zqd:B2 (2.97) BS41 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761816 7zqd:B2 (2.97) BS42 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761817 7zqd:B2 (2.97) BS43 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761818 7zqd:B2 (2.97) BS44 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761819 7zqd:B2 (2.97) BS45 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761820 7zqd:B2 (2.97) BS46 PQN 1.97.1.12 GO:0000287 ... P09144 36229605
    761821 7zqd:B2 (2.97) BS47 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761822 7zqd:B2 (2.97) BS48 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    761823 7zqd:C (2.97) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    761824 7zqd:C (2.97) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    761825 7zqd:C2 (2.97) BS01 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    761826 7zqd:C2 (2.97) BS02 SF4 1.97.1.12 GO:0009055 ... Q00914 36229605
    761827 7zqd:F (2.97) BS01 CLA ? GO:0005515 ... P12356 36229605
    761828 7zqd:F (2.97) BS02 CLA ? GO:0005515 ... P12356 36229605
    761829 7zqd:F (2.97) BS03 CLA ? GO:0005515 ... P12356 36229605
    761830 7zqd:F (2.97) BS04 CLA ? GO:0005515 ... P12356 36229605
    761831 7zqd:F (2.97) BS05 CLA ? GO:0005515 ... P12356 36229605
    761832 7zqd:F2 (2.97) BS01 CLA ? GO:0005515 ... P12356 36229605
    761833 7zqd:F2 (2.97) BS02 CLA ? GO:0005515 ... P12356 36229605
    761834 7zqd:F2 (2.97) BS03 CLA ? GO:0005515 ... P12356 36229605
    761835 7zqd:F2 (2.97) BS04 CLA ? GO:0005515 ... P12356 36229605
    761836 7zqd:F2 (2.97) BS05 CLA ? GO:0005515 ... P12356 36229605
    761837 7zqd:G (2.97) BS01 CLA ? GO:0009507 ... P14224 36229605
    761838 7zqd:G (2.97) BS02 CLA ? GO:0009507 ... P14224 36229605
    761839 7zqd:G (2.97) BS03 CLA ? GO:0009507 ... P14224 36229605
    761840 7zqd:G2 (2.97) BS01 CLA ? GO:0009507 ... P14224 36229605
    761841 7zqd:G2 (2.97) BS02 CLA ? GO:0009507 ... P14224 36229605
    761842 7zqd:G2 (2.97) BS03 CLA ? GO:0009507 ... P14224 36229605
    761843 7zqd:I (2.97) BS01 CLA ? GO:0009522 ... A8IFG7 36229605
    761844 7zqd:I2 (2.97) BS01 CLA ? GO:0009522 ... A8IFG7 36229605
    761845 7zqd:I2 (2.97) BS02 CLA ? GO:0009522 ... A8IFG7 36229605
    761846 7zqd:J (2.97) BS01 CLA ? GO:0009507 ... P59777 36229605
    761847 7zqd:J (2.97) BS02 CLA ? GO:0009507 ... P59777 36229605
    761848 7zqd:J (2.97) BS03 CLA ? GO:0009507 ... P59777 36229605
    761849 7zqd:J (2.97) BS04 CLA ? GO:0009507 ... P59777 36229605
    761850 7zqd:J (2.97) BS05 CLA ? GO:0009507 ... P59777 36229605
    761851 7zqd:J2 (2.97) BS01 CLA ? GO:0009507 ... P59777 36229605
    761852 7zqd:J2 (2.97) BS02 CLA ? GO:0009507 ... P59777 36229605
    761853 7zqd:J2 (2.97) BS03 CLA ? GO:0009507 ... P59777 36229605
    761854 7zqd:J2 (2.97) BS04 CLA ? GO:0009507 ... P59777 36229605
    761855 7zqd:J2 (2.97) BS05 CLA ? GO:0009507 ... P59777 36229605
    761856 7zqd:K (2.97) BS01 CLA ? GO:0009507 ... P14225 36229605
    761857 7zqd:K (2.97) BS02 CLA ? GO:0009507 ... P14225 36229605
    761858 7zqd:K (2.97) BS03 CLA ? GO:0009507 ... P14225 36229605
    761859 7zqd:K (2.97) BS04 CLA ? GO:0009507 ... P14225 36229605
    761860 7zqd:K (2.97) BS05 CLA ? GO:0009507 ... P14225 36229605
    761861 7zqd:K (2.97) BS06 CLA ? GO:0009507 ... P14225 36229605
    761862 7zqd:K (2.97) BS07 CLA ? GO:0009507 ... P14225 36229605
    761863 7zqd:K2 (2.97) BS01 CLA ? GO:0009507 ... P14225 36229605
    761864 7zqd:K2 (2.97) BS02 CLA ? GO:0009507 ... P14225 36229605
    761865 7zqd:K2 (2.97) BS03 CLA ? GO:0009507 ... P14225 36229605
    761866 7zqd:K2 (2.97) BS04 CLA ? GO:0009507 ... P14225 36229605
    761867 7zqd:K2 (2.97) BS05 CLA ? GO:0009507 ... P14225 36229605
    761868 7zqd:K2 (2.97) BS06 CLA ? GO:0009507 ... P14225 36229605
    761869 7zqd:K2 (2.97) BS07 CLA ? GO:0009507 ... P14225 36229605
    761870 7zqd:L (2.97) BS01 CLA ? GO:0009522 ... A8IL32 36229605
    761871 7zqd:L (2.97) BS02 CLA ? GO:0009522 ... A8IL32 36229605
    761872 7zqd:L (2.97) BS03 CLA ? GO:0009522 ... A8IL32 36229605
    761873 7zqd:L (2.97) BS04 CLA ? GO:0009522 ... A8IL32 36229605
    761874 7zqd:L (2.97) BS05 CLA ? GO:0009522 ... A8IL32 36229605
    761875 7zqd:L2 (2.97) BS01 CLA ? GO:0009522 ... A8IL32 36229605
    761876 7zqd:L2 (2.97) BS02 CLA ? GO:0009522 ... A8IL32 36229605
    761877 7zqd:L2 (2.97) BS03 CLA ? GO:0009522 ... A8IL32 36229605
    761878 7zqd:L2 (2.97) BS04 CLA ? GO:0009522 ... A8IL32 36229605
    761879 7zqd:L2 (2.97) BS05 CLA ? GO:0009522 ... A8IL32 36229605
    761880 7zqd:Z (2.97) BS01 CHL ? GO:0009416 ... Q05093 36229605
    761881 7zqd:Z (2.97) BS02 CLA ? GO:0009416 ... Q05093 36229605
    761882 7zqd:Z (2.97) BS03 CLA ? GO:0009416 ... Q05093 36229605
    761883 7zqd:Z (2.97) BS04 CLA ? GO:0009416 ... Q05093 36229605
    761884 7zqd:Z (2.97) BS05 CHL ? GO:0009416 ... Q05093 36229605
    761885 7zqd:Z (2.97) BS06 CHL ? GO:0009416 ... Q05093 36229605
    761886 7zqd:Z (2.97) BS07 CLA ? GO:0009416 ... Q05093 36229605
    761887 7zqd:Z (2.97) BS08 CLA ? GO:0009416 ... Q05093 36229605
    761888 7zqd:Z (2.97) BS09 CLA ? GO:0009416 ... Q05093 36229605
    761889 7zqd:Z (2.97) BS10 CLA ? GO:0009416 ... Q05093 36229605
    761890 7zqd:Z (2.97) BS11 CLA ? GO:0009416 ... Q05093 36229605
    761891 7zqd:Z (2.97) BS12 CLA ? GO:0009416 ... Q05093 36229605
    761892 7zqd:Z (2.97) BS13 CLA ? GO:0009416 ... Q05093 36229605
    761893 7zqd:Z (2.97) BS14 CLA ? GO:0009416 ... Q05093 36229605
    761894 7zqd:Z2 (2.97) BS01 CHL ? GO:0009416 ... Q05093 36229605
    761895 7zqd:Z2 (2.97) BS02 CLA ? GO:0009416 ... Q05093 36229605
    761896 7zqd:Z2 (2.97) BS03 CLA ? GO:0009416 ... Q05093 36229605
    761897 7zqd:Z2 (2.97) BS04 CLA ? GO:0009416 ... Q05093 36229605
    761898 7zqd:Z2 (2.97) BS05 CHL ? GO:0009416 ... Q05093 36229605
    761899 7zqd:Z2 (2.97) BS06 CHL ? GO:0009416 ... Q05093 36229605
    761900 7zqd:Z2 (2.97) BS07 CLA ? GO:0009416 ... Q05093 36229605
    761901 7zqd:Z2 (2.97) BS08 CLA ? GO:0009416 ... Q05093 36229605
    761902 7zqd:Z2 (2.97) BS09 CLA ? GO:0009416 ... Q05093 36229605
    761903 7zqd:Z2 (2.97) BS10 CLA ? GO:0009416 ... Q05093 36229605
    761904 7zqd:Z2 (2.97) BS11 CLA ? GO:0009416 ... Q05093 36229605
    761905 7zqd:Z2 (2.97) BS12 CLA ? GO:0009416 ... Q05093 36229605
    761906 7zqd:Z2 (2.97) BS13 CLA ? GO:0009416 ... Q05093 36229605
    761907 7zqd:Z2 (2.97) BS14 CLA ? GO:0009416 ... Q05093 36229605
    761908 7zqe:M (2.55) BS01 CU ? GO:0005507 ... P18068 36229605
    761909 7zqf:B (1.68) BS01 JW6 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q32ZE1 38809037
    761910 7zqg:A (1.8) BS01 SIW N/A N/A N/A N/A
    761911 7zqi:A (2.15) BS01 peptide ? N/A O98187 37483599
    761912 7zqj:A (2.25) BS01 peptide ? N/A O98187 37483599
    761913 7zqk:O (2.2) BS01 NAD 1.2.1.13 GO:0005515 ... P50362 35793584
    761914 7zqk:R (2.2) BS01 NAD 1.2.1.13 GO:0005515 ... P50362 35793584
    761915 7zqq:A (1.75) BS01 ATP ? GO:0005737 ... P84308 35779405
    761916 7zqq:A (1.75) BS02 MG ? GO:0005737 ... P84308 35779405
    761917 7zqq:B (1.75) BS01 ATP ? GO:0005737 ... P84253 35779405
    761918 7zqr:A (1.79) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761919 7zqr:A (1.79) BS02 JK9 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761920 7zqr:B (1.79) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761921 7zqr:B (1.79) BS02 JK9 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761922 7zqr:C (1.79) BS01 HEM 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761923 7zqr:C (1.79) BS02 JK9 1.14.15.29 GO:0004497 ... P9WPP1 36912255
    761924 7zqs:B (2.54) BS01 dna ? GO:0001558 ... P02786 35875870
    761925 7zqs:D (2.54) BS01 dna ? GO:0001558 ... P02786 35875870
    761926 7zqu:A (1.75) BS01 FMN ? GO:0000166 ... A8LP63 N/A
    761927 7zqv:A (2.26) BS01 XNV 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36336176
    761928 7zqv:B (2.26) BS01 XNV 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 36336176
    761929 7zqw:A (2.53) BS01 XNV 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69
    GO:0008233 ... P0C6U8 36336176
    761930 7zqx:A (1.05) BS01 JU0 ? GO:0030246 ... P17931 36154172
    761931 7zqy:A (2.51) BS01 ZN 3.6.-.- N/A G0SHW7 36577401
    761932 7zqy:B (2.51) BS01 ZN 3.6.-.- N/A G0SHW7 36577401
    761933 7zqy:C (2.51) BS01 ZN 3.6.-.- N/A G0SHW7 36577401
    761934 7zqy:D (2.51) BS01 ZN 3.6.-.- N/A G0SHW7 36577401
    761935 7zqz:A (1.68) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    761936 7zqz:B (1.68) BS01 HEC ? GO:0046872 ... G1UBD5 37100286
    761937 7zr0:A (3.4) BS01 ATP ? GO:0001890 ... P08238 36446791
    761938 7zr0:B (3.4) BS01 ATP ? GO:0001890 ... P08238 36446791
    761939 7zr1:A (4.0) BS01 MN 3.1.-.- GO:0000014 ... G0RYR3 36577401
    761940 7zr1:A (4.0) BS02 MN 3.1.-.- GO:0000014 ... G0RYR3 36577401
    761941 7zr1:B (4.0) BS01 MN 3.1.-.- GO:0000014 ... G0RYR3 36577401
    761942 7zr1:B (4.0) BS02 MN 3.1.-.- GO:0000014 ... G0RYR3 36577401
    761943 7zr1:C (4.0) BS01 MG 3.6.-.- GO:0000722 ... G0SHW7 36577401
    761944 7zr1:C (4.0) BS02 AGS 3.6.-.- GO:0000722 ... G0SHW7 36577401
    761945 7zr1:D (4.0) BS01 AGS 3.6.-.- GO:0000722 ... G0SHW7 36577401
    761946 7zr1:D (4.0) BS02 MG 3.6.-.- GO:0000722 ... G0SHW7 36577401
    761947 7zr1:D (4.0) BS03 AGS 3.6.-.- GO:0000722 ... G0SHW7 36577401
    761948 7zr4:A (1.701) BS01 MG ? GO:0005737 ... P84308 35779405
    761949 7zr4:A (1.701) BS02 ATP ? GO:0005737 ... P84308 35779405
    761950 7zr4:B (1.701) BS01 ATP ? GO:0005737 ... P84253 35779405
    761951 7zr5:A (3.9) BS01 ATP ? GO:0001890 ... P08238 36446791
    761952 7zr5:B (3.9) BS01 ATP ? GO:0001890 ... P08238 36446791
    761953 7zr6:A (4.2) BS01 ATP ? GO:0001890 ... P08238 36446791
    761954 7zr6:B (4.2) BS01 ATP ? GO:0001890 ... P08238 36446791
    761955 7zrd:A (3.3) BS01 peptide ? GO:0005515 ... P03959 36255052
    761956 7zrd:B (3.3) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761957 7zre:A (3.4) BS01 peptide ? GO:0005515 ... P03959 36255052
    761958 7zre:B (3.4) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761959 7zrg:A (3.5) BS01 peptide ? GO:0005515 ... P03959 36255052
    761960 7zrg:B (3.5) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761961 7zrg:B (3.5) BS02 ATP 7.2.2.6 GO:0000166 ... P03960 36255052
    761962 7zrh:A (3.4) BS01 peptide ? GO:0005515 ... P03959 36255052
    761963 7zrh:B (3.4) BS01 peptide 7.2.2.6 GO:0000287 ... P03960 36255052
    761964 7zri:A (3.5) BS01 peptide ? GO:0005515 ... P03959 36255052
    761965 7zri:B (3.5) BS01 peptide 7.2.2.6 GO:0000287 ... P03960 36255052
    761966 7zrj:A (3.7) BS01 peptide ? GO:0005515 ... P03959 36255052
    761967 7zrj:B (3.7) BS01 peptide 7.2.2.6 GO:0000287 ... P03960 36255052
    761968 7zrk:A (3.1) BS01 peptide ? GO:0005515 ... P03959 36255052
    761969 7zrk:B (3.1) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761970 7zrk:B (3.1) BS02 ADP 7.2.2.6 GO:0000166 ... P03960 36255052
    761971 7zrl:A (4.0) BS01 peptide ? GO:0005515 ... P03959 36255052
    761972 7zrl:B (4.0) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761973 7zrm:B (3.7) BS01 peptide 7.2.2.6 GO:0000166 ... P03960 36255052
    761974 7zrm:B (3.7) BS02 ADP 7.2.2.6 GO:0000166 ... P03960 36255052
    761975 7zrn:A (1.82) BS01 PPV 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761976 7zrn:A (1.82) BS02 MG 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761977 7zrn:A (1.82) BS03 MG 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761978 7zrn:B (1.82) BS01 PPV 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761979 7zrn:B (1.82) BS02 MG 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761980 7zrn:B (1.82) BS03 MG 4.2.3.175 GO:0010333 ... A9GK58 36249875
    761981 7zrp:A (2.65) BS01 peptide ? GO:0000086 ... P0DP23 36496072
    761982 7zrp:A (2.65) BS02 CA ? GO:0000086 ... P0DP23 36496072
    761983 7zrp:A (2.65) BS03 CA ? GO:0000086 ... P0DP23 36496072
    761984 7zrp:A (2.65) BS04 CA ? GO:0000086 ... P0DP23 36496072
    761985 7zrp:A (2.65) BS05 CA ? GO:0000086 ... P0DP23 36496072
    761986 7zrp:A (2.65) BS06 ZN ? GO:0000086 ... P0DP23 36496072
    761987 7zrp:C (2.65) BS01 peptide ? GO:0000086 ... P0DP23 36496072
    761988 7zrp:C (2.65) BS02 CA ? GO:0000086 ... P0DP23 36496072
    761989 7zrp:C (2.65) BS03 CA ? GO:0000086 ... P0DP23 36496072
    761990 7zrp:C (2.65) BS04 CA ? GO:0000086 ... P0DP23 36496072
    761991 7zrp:C (2.65) BS05 CA ? GO:0000086 ... P0DP23 36496072
    761992 7zrp:C (2.65) BS06 ZN ? GO:0000086 ... P0DP23 36496072
    761993 7zrp:C (2.65) BS07 ZN ? GO:0000086 ... P0DP23 36496072
    761994 7zrq:A (1.68) BS01 peptide ? GO:0000086 ... P0DP23 36496072
    761995 7zrq:A (1.68) BS02 CA ? GO:0000086 ... P0DP23 36496072
    761996 7zrq:A (1.68) BS03 CA ? GO:0000086 ... P0DP23 36496072
    761997 7zrq:A (1.68) BS04 CA ? GO:0000086 ... P0DP23 36496072
    761998 7zrq:A (1.68) BS05 CA ? GO:0000086 ... P0DP23 36496072
    761999 7zrr:A (1.64) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 N/A
    762000 7zrs:AA (4.8) BS01 rna ? GO:0003735 ... P32905 36801861

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).